RNA–Protein interactions for RNA: ENST00000339865.9

USP47-202, Transcript of ubiquitin specific peptidase 47, humanhuman

TSL 2 BASIC

Gene USP47, Length 7,775 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP47-202ENST00000339865 BUB3O43684 328 aa10.4□□□□□ -0.75
USP47-202ENST00000339865 TMEM190Q8WZ59 177 aa10.4□□□□□ -0.75
USP47-202ENST00000339865 SDHAF1A6NFY7 115 aa10.39□□□□□ -0.75
USP47-202ENST00000339865 NPYP01303 97 aa10.39□□□□□ -0.75
USP47-202ENST00000339865 EFNA4P52798 201 aa10.39□□□□□ -0.75
USP47-202ENST00000339865 NREPQ16612 68 aa10.39□□□□□ -0.75
USP47-202ENST00000339865 LYZL4Q96KX0 146 aa10.39□□□□□ -0.75
USP47-202ENST00000339865 FOXE3Q13461 319 aa10.39□□□□□ -0.75
USP47-202ENST00000339865 PRSS47A8MTI9 375 aa10.39□□□□□ -0.75
USP47-202ENST00000339865 H3BUX3 64 aa10.39□□□□□ -0.75
USP47-202ENST00000339865 IGKV1-39P01597 117 aa10.39□□□□□ -0.75
USP47-202ENST00000339865 IGKV1D-39P04432 117 aa10.39□□□□□ -0.75
USP47-202ENST00000339865 VWC2Q2TAL6 325 aa10.39□□□□□ -0.75
USP47-202ENST00000339865 VSIG2Q96IQ7 327 aa10.39□□□□□ -0.75
USP47-202ENST00000339865 WISP3O95389 354 aaPredicted RBP10.39□□□□□ -0.75
USP47-202ENST00000339865 RHPN1-AS1Q9BWJ2 59 aa10.39□□□□□ -0.75
USP47-202ENST00000339865 A0A0B4J2C4 111 aa10.39□□□□□ -0.75
USP47-202ENST00000339865 GPHB5Q86YW7 130 aa10.39□□□□□ -0.75
USP47-202ENST00000339865 Q8N8P6 123 aa10.39□□□□□ -0.75
USP47-202ENST00000339865 RNASE6Q93091 150 aaKnown RBP10.39□□□□□ -0.75
USP47-202ENST00000339865 IGF2BP2-AS1Q96M15 143 aa10.39□□□□□ -0.75
USP47-202ENST00000339865 A0A087WV48 116 aa10.38□□□□□ -0.75
USP47-202ENST00000339865 TEX22C9J3V5 150 aa10.38□□□□□ -0.75
USP47-202ENST00000339865 TMEM75Q8N9X5 138 aa10.38□□□□□ -0.75
USP47-202ENST00000339865 FGFBP3Q8TAT2 258 aa10.38□□□□□ -0.75
USP47-202ENST00000339865 USMG5Q96IX5 58 aa10.38□□□□□ -0.75
USP47-202ENST00000339865 MGAMO43451 1857 aa10.38□□□□□ -0.75
USP47-202ENST00000339865 NRXN3Q9Y4C0 1643 aa10.38□□□□□ -0.75
USP47-202ENST00000339865 K7ERS5 55 aa10.38□□□□□ -0.75
USP47-202ENST00000339865 HERVK_113P63121 156 aa10.38□□□□□ -0.75
USP47-202ENST00000339865 LGALS9BQ3B8N2 356 aa10.38□□□□□ -0.75
USP47-202ENST00000339865 LGALS9CQ6DKI2 356 aa10.38□□□□□ -0.75
USP47-202ENST00000339865 APOC4P55056 127 aa10.38□□□□□ -0.75
USP47-202ENST00000339865 Q86TA4 180 aa10.38□□□□□ -0.75
USP47-202ENST00000339865 CYTL1Q9NRR1 136 aa10.38□□□□□ -0.75
USP47-202ENST00000339865 IGKV4-1P06312 121 aa10.38□□□□□ -0.75
USP47-202ENST00000339865 HIGD2BQ4VC39 106 aa10.38□□□□□ -0.75
USP47-202ENST00000339865 IGKV1-9A0A0C4DH69 117 aa10.37□□□□□ -0.75
USP47-202ENST00000339865 NTN3O00634 580 aaPredicted RBP10.37□□□□□ -0.75
USP47-202ENST00000339865 RMI2Q96E14 147 aa10.37□□□□□ -0.75
USP47-202ENST00000339865 PTPRBP23467 1997 aa10.37□□□□□ -0.75
USP47-202ENST00000339865 SMIM10L1P0DMW3 83 aa10.37□□□□□ -0.75
USP47-202ENST00000339865 C9orf106Q8NAJ2 232 aa10.37□□□□□ -0.75
USP47-202ENST00000339865 SMIM10Q96HG1 83 aa10.37□□□□□ -0.75
USP47-202ENST00000339865 PRSS46E5RG02 174 aa10.37□□□□□ -0.75
USP47-202ENST00000339865 ZNF493Q6ZR52 646 aa10.37□□□□□ -0.75
USP47-202ENST00000339865 SIGLEC8Q9NYZ4 499 aa10.37□□□□□ -0.75
USP47-202ENST00000339865 LINC00205P59089 165 aa10.37□□□□□ -0.75
USP47-202ENST00000339865 CYYR1Q96J86 154 aa10.37□□□□□ -0.75
USP47-202ENST00000339865 LMO1P25800 156 aa10.37□□□□□ -0.75
USP47-202ENST00000339865 MLANAQ16655 118 aa10.36□□□□□ -0.75
USP47-202ENST00000339865 C5orf64Q2M2E5 130 aa10.36□□□□□ -0.75
USP47-202ENST00000339865 RNF166Q96A37 237 aaPredicted RBP10.36□□□□□ -0.75
USP47-202ENST00000339865 DAZ1Q9NQZ3 744 aaKnown RBP10.36□□□□□ -0.75
USP47-202ENST00000339865 DKK2Q9UBU2 259 aa10.36□□□□□ -0.75
USP47-202ENST00000339865 LRP5O75197 1615 aa10.36□□□□□ -0.75
USP47-202ENST00000339865 ETDCA0A1B0GVM5 59 aa10.36□□□□□ -0.75
USP47-202ENST00000339865 IGHV1-8P0DP01 117 aa10.36□□□□□ -0.75
USP47-202ENST00000339865 TAX1BP3O14907 124 aa10.36□□□□□ -0.75
USP47-202ENST00000339865 DSCR9P59020 149 aa10.36□□□□□ -0.75
USP47-202ENST00000339865 PDE6HQ13956 83 aa10.36□□□□□ -0.75
USP47-202ENST00000339865 IGLC7A0M8Q6 106 aa10.35□□□□□ -0.75
USP47-202ENST00000339865 PAQR4Q8N4S7 273 aaPredicted RBP10.35□□□□□ -0.75
USP47-202ENST00000339865 FAM223BA6NKX1 122 aa10.35□□□□□ -0.75
USP47-202ENST00000339865 K7EMI3 77 aa10.35□□□□□ -0.75
USP47-202ENST00000339865 FAM223AQ8IWN6 122 aa10.35□□□□□ -0.75
USP47-202ENST00000339865 Q6ZVH6 145 aa10.35□□□□□ -0.75
USP47-202ENST00000339865 SEM1Q6ZVN7 128 aa10.35□□□□□ -0.75
USP47-202ENST00000339865 H0YJW9 148 aa10.34□□□□□ -0.75
USP47-202ENST00000339865 ETV2O00321 342 aaPredicted RBP10.34□□□□□ -0.75
USP47-202ENST00000339865 CFC1BP0CG36 223 aa10.34□□□□□ -0.75
USP47-202ENST00000339865 CFC1P0CG37 223 aa10.34□□□□□ -0.75
USP47-202ENST00000339865 TMEM14EPQ6UXP3 125 aa10.34□□□□□ -0.75
USP47-202ENST00000339865 HS3ST6Q96QI5 342 aa10.34□□□□□ -0.75
USP47-202ENST00000339865 MLST8Q9BVC4 326 aa10.34□□□□□ -0.75
USP47-202ENST00000339865 KLF2Q9Y5W3 355 aaPredicted RBP10.34□□□□□ -0.75
USP47-202ENST00000339865 SIPA1L1O43166 1804 aa10.34□□□□□ -0.75
USP47-202ENST00000339865 ITGBL1O95965 494 aaPredicted RBP10.34□□□□□ -0.75
USP47-202ENST00000339865 CASC2Q6XLA1 102 aa10.34□□□□□ -0.75
USP47-202ENST00000339865 KIF26AQ9ULI4 1882 aaPredicted RBP10.34□□□□□ -0.75
USP47-202ENST00000339865 ADCYAP1P18509 176 aa10.34□□□□□ -0.75
USP47-202ENST00000339865 ASPHD1Q5U4P2 390 aa10.34□□□□□ -0.75
USP47-202ENST00000339865 SAP25Q8TEE9 199 aa10.34□□□□□ -0.75
USP47-202ENST00000339865 Q9H8V8 135 aa10.34□□□□□ -0.75
USP47-202ENST00000339865 H0Y9J4 135 aa10.34□□□□□ -0.75
USP47-202ENST00000339865 BUB1B-PAK6H3BSN5 160 aa10.34□□□□□ -0.75
USP47-202ENST00000339865 UBE2E1P51965 193 aa10.34□□□□□ -0.75
USP47-202ENST00000339865 PFN1P07737 140 aaKnown RBP10.34□□□□□ -0.75
USP47-202ENST00000339865 CR1LQ2VPA4 569 aa10.34□□□□□ -0.75
USP47-202ENST00000339865 TRBV19A0A075B6N1 114 aa10.33□□□□□ -0.76
USP47-202ENST00000339865 IGHV1-18A0A0C4DH31 117 aa10.33□□□□□ -0.76
USP47-202ENST00000339865 FOXF2Q12947 444 aa10.33□□□□□ -0.76
USP47-202ENST00000339865 LYPD6Q86Y78 171 aa10.33□□□□□ -0.76
USP47-202ENST00000339865 LINC01356Q8N9X3 169 aa10.33□□□□□ -0.76
USP47-202ENST00000339865 IGHV1-46P01743 117 aa10.33□□□□□ -0.76
USP47-202ENST00000339865 PAX9P55771 341 aa10.33□□□□□ -0.76
USP47-202ENST00000339865 TRAV26-1A0A087WT03 109 aa10.33□□□□□ -0.76
USP47-202ENST00000339865 C15orf62A8K5M9 175 aa10.33□□□□□ -0.76
USP47-202ENST00000339865 IGLL5B9A064 214 aa10.33□□□□□ -0.76
USP47-202ENST00000339865 DYNAPQ8N1N2 210 aa10.33□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms