RNA–Protein interactions for RNA: ENST00000338758.11

PARVB-201, Transcript of parvin beta, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PARVB, Length 5,429 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PARVB-201ENST00000338758 ZNF492Q9P255 531 aa11.14□□□□□ -0.63
PARVB-201ENST00000338758 CHTOPQ9Y3Y2 248 aaKnown RBP11.14□□□□□ -0.63
PARVB-201ENST00000338758 IGLV11-55A0A075B6I3 123 aa11.14□□□□□ -0.63
PARVB-201ENST00000338758 IGHV3-64A0A075B6Q5 118 aa11.14□□□□□ -0.63
PARVB-201ENST00000338758 IGHV1OR15-1A0A075B7D0 117 aa11.14□□□□□ -0.63
PARVB-201ENST00000338758 UBE2DNLQ8IWF7 75 aa11.14□□□□□ -0.63
PARVB-201ENST00000338758 ODF3L1Q8IXM7 274 aa11.14□□□□□ -0.63
PARVB-201ENST00000338758 BCL6BQ8N143 479 aaPredicted RBP11.14□□□□□ -0.63
PARVB-201ENST00000338758 LOC102724200A0A096LPH7 203 aaPredicted RBP11.14□□□□□ -0.63
PARVB-201ENST00000338758 ANXA2RQ3ZCQ2 193 aa11.14□□□□□ -0.63
PARVB-201ENST00000338758 MTORP42345 2549 aa11.14□□□□□ -0.63
PARVB-201ENST00000338758 I3L2K1 104 aa11.14□□□□□ -0.63
PARVB-201ENST00000338758 ZNF114Q8NC26 417 aa11.14□□□□□ -0.63
PARVB-201ENST00000338758 IGHV3-16A0A0C4DH30 117 aa11.13□□□□□ -0.63
PARVB-201ENST00000338758 SLURP1P55000 103 aa11.13□□□□□ -0.63
PARVB-201ENST00000338758 HIST2H2BCQ6DN03 193 aa11.13□□□□□ -0.63
PARVB-201ENST00000338758 MCRIP2Q9BUT9 160 aaKnown RBP11.13□□□□□ -0.63
PARVB-201ENST00000338758 CTSGP08311 255 aa11.13□□□□□ -0.63
PARVB-201ENST00000338758 FOXE3Q13461 319 aa11.13□□□□□ -0.63
PARVB-201ENST00000338758 HIST3H2BBQ8N257 126 aa11.13□□□□□ -0.63
PARVB-201ENST00000338758 OR5A1Q8NGJ0 315 aa11.12□□□□□ -0.63
PARVB-201ENST00000338758 LINC01549A6NIU2 74 aa11.12□□□□□ -0.63
PARVB-201ENST00000338758 OR2K2Q8NGT1 345 aa11.12□□□□□ -0.63
PARVB-201ENST00000338758 ASPHD1Q5U4P2 390 aa11.12□□□□□ -0.63
PARVB-201ENST00000338758 GFRA4Q9GZZ7 299 aa11.12□□□□□ -0.63
PARVB-201ENST00000338758 TRAV9-2A0A087WT02 112 aa11.12□□□□□ -0.63
PARVB-201ENST00000338758 E7EUB6 86 aa11.12□□□□□ -0.63
PARVB-201ENST00000338758 F5H768 121 aa11.12□□□□□ -0.63
PARVB-201ENST00000338758 TMEM158Q8WZ71 300 aa11.12□□□□□ -0.63
PARVB-201ENST00000338758 GAGE12BA1L429 117 aa11.11□□□□□ -0.63
PARVB-201ENST00000338758 GAGE7O76087 117 aa11.11□□□□□ -0.63
PARVB-201ENST00000338758 GAGE12FP0CL80 117 aa11.11□□□□□ -0.63
PARVB-201ENST00000338758 GAGE12GP0CL81 117 aa11.11□□□□□ -0.63
PARVB-201ENST00000338758 GAGE12IP0CL82 117 aa11.11□□□□□ -0.63
PARVB-201ENST00000338758 DMRTA1Q5VZB9 504 aa11.11□□□□□ -0.63
PARVB-201ENST00000338758 IGLV2-14P01704 120 aa11.11□□□□□ -0.63
PARVB-201ENST00000338758 IGKCP01834 107 aa11.11□□□□□ -0.63
PARVB-201ENST00000338758 CGB3P0DN86 165 aa11.11□□□□□ -0.63
PARVB-201ENST00000338758 CGB7P0DN87 165 aa11.11□□□□□ -0.63
PARVB-201ENST00000338758 PROP1O75360 226 aa11.11□□□□□ -0.63
PARVB-201ENST00000338758 DAD1P61803 113 aa11.11□□□□□ -0.63
PARVB-201ENST00000338758 VWC2Q2TAL6 325 aa11.11□□□□□ -0.63
PARVB-201ENST00000338758 MRPS16Q9Y3D3 137 aaKnown RBP11.11□□□□□ -0.63
PARVB-201ENST00000338758 FAM231BA6NCW3 169 aa11.1□□□□□ -0.63
PARVB-201ENST00000338758 RHODO00212 210 aa11.1□□□□□ -0.63
PARVB-201ENST00000338758 DNAL4O96015 105 aa11.1□□□□□ -0.63
PARVB-201ENST00000338758 UTF1Q5T230 341 aa11.1□□□□□ -0.63
PARVB-201ENST00000338758 WFDC11Q8NEX6 87 aa11.1□□□□□ -0.63
PARVB-201ENST00000338758 AGPAT4-IT1Q9H0P7 198 aa11.1□□□□□ -0.63
PARVB-201ENST00000338758 MRPL16Q9NX20 251 aaKnown RBP11.1□□□□□ -0.63
PARVB-201ENST00000338758 IGLV2-23P01705 113 aa11.1□□□□□ -0.63
PARVB-201ENST00000338758 SMIM13P0DJ93 91 aa11.1□□□□□ -0.63
PARVB-201ENST00000338758 LOXL1Q08397 574 aaPredicted RBP11.1□□□□□ -0.63
PARVB-201ENST00000338758 ZC2HC1AQ96GY0 325 aa11.1□□□□□ -0.63
PARVB-201ENST00000338758 ATP6V0BQ99437 205 aa11.1□□□□□ -0.63
PARVB-201ENST00000338758 TNFRSF6BO95407 300 aa11.1□□□□□ -0.63
PARVB-201ENST00000338758 CT83Q5H943 113 aa11.1□□□□□ -0.63
PARVB-201ENST00000338758 C11orf52Q96A22 123 aa11.1□□□□□ -0.63
PARVB-201ENST00000338758 GAGE12JA6NER3 117 aa11.1□□□□□ -0.63
PARVB-201ENST00000338758 GAGE1Q13065 139 aa11.1□□□□□ -0.63
PARVB-201ENST00000338758 GAGE4Q13068 117 aa11.1□□□□□ -0.63
PARVB-201ENST00000338758 GAGE5Q13069 117 aa11.1□□□□□ -0.63
PARVB-201ENST00000338758 GAGE13Q4V321 117 aa11.1□□□□□ -0.63
PARVB-201ENST00000338758 POLQO75417 2590 aa11.1□□□□□ -0.63
PARVB-201ENST00000338758 DYNAPQ8N1N2 210 aa11.1□□□□□ -0.63
PARVB-201ENST00000338758 ARHGAP32A7KAX9 2087 aa11.1□□□□□ -0.63
PARVB-201ENST00000338758 TRAV13-1A0A0B4J241 112 aa11.09□□□□□ -0.63
PARVB-201ENST00000338758 TEX43Q6ZNM6 134 aa11.09□□□□□ -0.63
PARVB-201ENST00000338758 UBE2CO00762 179 aa11.09□□□□□ -0.63
PARVB-201ENST00000338758 ZNF815PA8K554 130 aa11.09□□□□□ -0.63
PARVB-201ENST00000338758 TEX22C9J3V5 150 aa11.09□□□□□ -0.63
PARVB-201ENST00000338758 PRSS46E5RG02 174 aa11.08□□□□□ -0.64
PARVB-201ENST00000338758 AZU1P20160 251 aa11.08□□□□□ -0.64
PARVB-201ENST00000338758 APOC4P55056 127 aa11.08□□□□□ -0.64
PARVB-201ENST00000338758 CRIP3Q6Q6R5 217 aa11.08□□□□□ -0.64
PARVB-201ENST00000338758 TRBV7-9A0A0J9YWB2 115 aa11.08□□□□□ -0.64
PARVB-201ENST00000338758 FAM104BQ5XKR9 115 aa11.08□□□□□ -0.64
PARVB-201ENST00000338758 Q6ZPA2 131 aa11.08□□□□□ -0.64
PARVB-201ENST00000338758 FAM231DQ6ZW35 169 aa11.08□□□□□ -0.64
PARVB-201ENST00000338758 IGHG2P01859 326 aa11.08□□□□□ -0.64
PARVB-201ENST00000338758 MORN5Q5VZ52 161 aa11.08□□□□□ -0.64
PARVB-201ENST00000338758 V9GYV3 84 aa11.08□□□□□ -0.64
PARVB-201ENST00000338758 PATE2Q6UY27 113 aa11.07□□□□□ -0.64
PARVB-201ENST00000338758 TRPT1Q86TN4 253 aaKnown RBP11.07□□□□□ -0.64
PARVB-201ENST00000338758 GSN-AS1Q9NRJ2 163 aa11.07□□□□□ -0.64
PARVB-201ENST00000338758 C11orf68Q9H3H3 251 aaKnown RBP11.07□□□□□ -0.64
PARVB-201ENST00000338758 MRPL36Q9P0J6 103 aaKnown RBP11.07□□□□□ -0.64
PARVB-201ENST00000338758 PRSS57Q6UWY2 283 aa11.07□□□□□ -0.64
PARVB-201ENST00000338758 TRAV2A0A0B4J234 112 aa11.06□□□□□ -0.64
PARVB-201ENST00000338758 SFTA2Q6UW10 78 aa11.06□□□□□ -0.64
PARVB-201ENST00000338758 A8MWV9 139 aa11.06□□□□□ -0.64
PARVB-201ENST00000338758 C3orf79P0CE67 100 aa11.06□□□□□ -0.64
PARVB-201ENST00000338758 APRG1Q8IVJ8 170 aa11.06□□□□□ -0.64
PARVB-201ENST00000338758 LY6G5BQ8NDX9 201 aa11.06□□□□□ -0.64
PARVB-201ENST00000338758 IGHV4OR15-8A0A075B7B6 117 aa11.06□□□□□ -0.64
PARVB-201ENST00000338758 A0A087WW49 117 aa11.06□□□□□ -0.64
PARVB-201ENST00000338758 A0A1B0GUS0 222 aa11.06□□□□□ -0.64
PARVB-201ENST00000338758 LOC105371267A0A1B0GV96 52 aa11.06□□□□□ -0.64
PARVB-201ENST00000338758 FOXI2Q6ZQN5 318 aa11.06□□□□□ -0.64
PARVB-201ENST00000338758 BUB3O43684 328 aa11.06□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 35.9 ms