RNA–Protein interactions for RNA: ENST00000334527.11

NDEL1-201, Transcript of nudE neurodevelopment protein 1 like 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NDEL1, Length 2,372 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDEL1-201ENST00000334527 ZFHX3Q15911 3703 aa17.91■□□□□ 0.46
NDEL1-201ENST00000334527 HIF1ANQ9NWT6 349 aa17.91■□□□□ 0.46
NDEL1-201ENST00000334527 C9orf47Q6ZRZ4 202 aa17.9■□□□□ 0.46
NDEL1-201ENST00000334527 OR1N2Q8NGR9 330 aa17.9■□□□□ 0.46
NDEL1-201ENST00000334527 C16orf92Q96LL3 132 aa17.9■□□□□ 0.46
NDEL1-201ENST00000334527 TRAV40A0A0B4J280 105 aa17.9■□□□□ 0.46
NDEL1-201ENST00000334527 FGF6P10767 208 aa17.9■□□□□ 0.46
NDEL1-201ENST00000334527 GATA1P15976 413 aaPredicted RBP17.9■□□□□ 0.46
NDEL1-201ENST00000334527 TCTAP57738 103 aa17.9■□□□□ 0.46
NDEL1-201ENST00000334527 VAMP3Q15836 100 aa17.9■□□□□ 0.46
NDEL1-201ENST00000334527 C18orf15Q96N68 181 aa17.9■□□□□ 0.46
NDEL1-201ENST00000334527 PRORYQ9H606 182 aa17.9■□□□□ 0.46
NDEL1-201ENST00000334527 LINC01546A6NGU7 62 aa17.89■□□□□ 0.45
NDEL1-201ENST00000334527 ARL3P36405 182 aa17.89■□□□□ 0.45
NDEL1-201ENST00000334527 NPFFR1Q9GZQ6 430 aa17.89■□□□□ 0.45
NDEL1-201ENST00000334527 NXT2Q9NPJ8 142 aaKnown RBP17.89■□□□□ 0.45
NDEL1-201ENST00000334527 LEPP41159 167 aa17.89■□□□□ 0.45
NDEL1-201ENST00000334527 ATP6V0BQ99437 205 aa17.89■□□□□ 0.45
NDEL1-201ENST00000334527 ABCA2Q9BZC7 2435 aa17.89■□□□□ 0.45
NDEL1-201ENST00000334527 Q6ZQT7 251 aa17.88■□□□□ 0.45
NDEL1-201ENST00000334527 GLMPQ8WWB7 406 aa17.88■□□□□ 0.45
NDEL1-201ENST00000334527 CRIP2P52943 208 aaPredicted RBP17.88■□□□□ 0.45
NDEL1-201ENST00000334527 IGHV7-4-1A0A0J9YVY3 117 aa17.87■□□□□ 0.45
NDEL1-201ENST00000334527 IGHV4-61A0A0C4DH41 118 aa17.87■□□□□ 0.45
NDEL1-201ENST00000334527 CBY3A6NI87 242 aa17.87■□□□□ 0.45
NDEL1-201ENST00000334527 FCER1GP30273 86 aa17.87■□□□□ 0.45
NDEL1-201ENST00000334527 DKK2Q9UBU2 259 aa17.87■□□□□ 0.45
NDEL1-201ENST00000334527 CD5LO43866 347 aa17.86■□□□□ 0.45
NDEL1-201ENST00000334527 TRBV12-3P01733 135 aa17.86■□□□□ 0.45
NDEL1-201ENST00000334527 UNQ9165/PRO28630Q6UXU0 137 aa17.86■□□□□ 0.45
NDEL1-201ENST00000334527 C9orf139Q6ZV77 190 aa17.86■□□□□ 0.45
NDEL1-201ENST00000334527 C20orf173Q96LM9 149 aa17.86■□□□□ 0.45
NDEL1-201ENST00000334527 PIMREGQ9BSJ6 248 aa17.86■□□□□ 0.45
NDEL1-201ENST00000334527 CELSR1Q9NYQ6 3014 aa17.85■□□□□ 0.45
NDEL1-201ENST00000334527 SMIM15Q7Z3B0 74 aa17.85■□□□□ 0.45
NDEL1-201ENST00000334527 BOD1L2Q8IYS8 172 aa17.85■□□□□ 0.45
NDEL1-201ENST00000334527 PPP1R14DQ9NXH3 145 aa17.85■□□□□ 0.45
NDEL1-201ENST00000334527 SMAD7O15105 426 aaKnown RBP17.84■□□□□ 0.45
NDEL1-201ENST00000334527 TMEM97Q5BJF2 176 aa17.84■□□□□ 0.45
NDEL1-201ENST00000334527 UFC1Q9Y3C8 167 aa17.84■□□□□ 0.45
NDEL1-201ENST00000334527 LY6EQ16553 131 aa17.84■□□□□ 0.45
NDEL1-201ENST00000334527 OR4C5Q8NGB2 326 aa17.84■□□□□ 0.45
NDEL1-201ENST00000334527 OR2K2Q8NGT1 345 aa17.84■□□□□ 0.45
NDEL1-201ENST00000334527 MEGF9Q9H1U4 602 aa17.84■□□□□ 0.45
NDEL1-201ENST00000334527 PRR9Q5T870 116 aa17.83■□□□□ 0.45
NDEL1-201ENST00000334527 VPS13CQ709C8 3753 aa17.83■□□□□ 0.44
NDEL1-201ENST00000334527 IGHV4-38-2P0DP08 117 aa17.83■□□□□ 0.44
NDEL1-201ENST00000334527 SPANXN1Q5VSR9 72 aa17.83■□□□□ 0.44
NDEL1-201ENST00000334527 Q8N8P6 123 aa17.83■□□□□ 0.44
NDEL1-201ENST00000334527 IGF1P05019 195 aa17.82■□□□□ 0.44
NDEL1-201ENST00000334527 TRAV26-2A0A0B4J265 109 aa17.82■□□□□ 0.44
NDEL1-201ENST00000334527 TMEM158Q8WZ71 300 aa17.82■□□□□ 0.44
NDEL1-201ENST00000334527 NDUFA4O00483 81 aa17.81■□□□□ 0.44
NDEL1-201ENST00000334527 NMUP48645 174 aa17.81■□□□□ 0.44
NDEL1-201ENST00000334527 GPHB5Q86YW7 130 aa17.81■□□□□ 0.44
NDEL1-201ENST00000334527 CCL19Q99731 98 aa17.81■□□□□ 0.44
NDEL1-201ENST00000334527 IGLV2-18A0A075B6J9 118 aa17.81■□□□□ 0.44
NDEL1-201ENST00000334527 H3BVH4 76 aa17.81■□□□□ 0.44
NDEL1-201ENST00000334527 J3KRW8 73 aa17.81■□□□□ 0.44
NDEL1-201ENST00000334527 C10orf105Q8TEF2 133 aa17.8■□□□□ 0.44
NDEL1-201ENST00000334527 LENEPQ9Y5L5 61 aa17.8■□□□□ 0.44
NDEL1-201ENST00000334527 IGHV4-4A0A075B6R2 117 aa17.8■□□□□ 0.44
NDEL1-201ENST00000334527 IGHV3-11P01762 117 aa17.8■□□□□ 0.44
NDEL1-201ENST00000334527 PRSS1P07477 247 aa17.8■□□□□ 0.44
NDEL1-201ENST00000334527 SEC11AP67812 179 aa17.8■□□□□ 0.44
NDEL1-201ENST00000334527 ODF1Q14990 250 aa17.8■□□□□ 0.44
NDEL1-201ENST00000334527 NRACQ8N912 160 aa17.8■□□□□ 0.44
NDEL1-201ENST00000334527 OR9G4Q8NGQ1 327 aa17.8■□□□□ 0.44
NDEL1-201ENST00000334527 A1L4Q6 167 aa17.79■□□□□ 0.44
NDEL1-201ENST00000334527 H3BUX3 64 aa17.79■□□□□ 0.44
NDEL1-201ENST00000334527 PCP2Q8IVA1 136 aa17.79■□□□□ 0.44
NDEL1-201ENST00000334527 AMMECR1LQ6DCA0 310 aa17.79■□□□□ 0.44
NDEL1-201ENST00000334527 C7orf71A4D174 169 aa17.78■□□□□ 0.44
NDEL1-201ENST00000334527 OR10J6PQ8NGY7 276 aa17.78■□□□□ 0.44
NDEL1-201ENST00000334527 IGHG2P01859 326 aa17.77■□□□□ 0.44
NDEL1-201ENST00000334527 USMG5Q96IX5 58 aa17.77■□□□□ 0.44
NDEL1-201ENST00000334527 LINC00477Q96M19 166 aa17.77■□□□□ 0.44
NDEL1-201ENST00000334527 SOCS3O14543 225 aa17.77■□□□□ 0.44
NDEL1-201ENST00000334527 KLK15Q9H2R5 256 aa17.77■□□□□ 0.44
NDEL1-201ENST00000334527 ZMAT4Q9H898 229 aa17.77■□□□□ 0.44
NDEL1-201ENST00000334527 SIVA1O15304 175 aa17.76■□□□□ 0.43
NDEL1-201ENST00000334527 PF4V1P10720 104 aa17.76■□□□□ 0.43
NDEL1-201ENST00000334527 DEFB1P60022 68 aa17.76■□□□□ 0.43
NDEL1-201ENST00000334527 FOXC2Q99958 501 aa17.76■□□□□ 0.43
NDEL1-201ENST00000334527 A6NDX4 124 aa17.76■□□□□ 0.43
NDEL1-201ENST00000334527 OVOL1O14753 267 aa17.76■□□□□ 0.43
NDEL1-201ENST00000334527 RPL11P62913 178 aaKnown RBP17.76■□□□□ 0.43
NDEL1-201ENST00000334527 CLEC2AQ6UVW9 174 aa17.76■□□□□ 0.43
NDEL1-201ENST00000334527 ZFAND2AQ8N6M9 145 aa17.76■□□□□ 0.43
NDEL1-201ENST00000334527 RNASE8Q8TDE3 154 aaKnown RBP17.76■□□□□ 0.43
NDEL1-201ENST00000334527 PEF1Q9UBV8 284 aaKnown RBP17.76■□□□□ 0.43
NDEL1-201ENST00000334527 PRSS47A8MTI9 375 aa17.75■□□□□ 0.43
NDEL1-201ENST00000334527 H3BUA1 57 aa17.75■□□□□ 0.43
NDEL1-201ENST00000334527 K7EP13 123 aa17.75■□□□□ 0.43
NDEL1-201ENST00000334527 SMIM17P0DL12 118 aa17.75■□□□□ 0.43
NDEL1-201ENST00000334527 HSD52Q0P140 79 aa17.75■□□□□ 0.43
NDEL1-201ENST00000334527 BLCAPP62952 87 aa17.75■□□□□ 0.43
NDEL1-201ENST00000334527 LAGE3Q14657 143 aa17.75■□□□□ 0.43
NDEL1-201ENST00000334527 TRAV8-6A0A0B4J262 113 aa17.74■□□□□ 0.43
NDEL1-201ENST00000334527 ADAMTSL5Q6ZMM2 481 aa17.74■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms