RNA–Protein interactions for RNA: ENST00000334060.8

SHOX-201, Transcript of short stature homeobox, humanhuman

TSL 5 BASIC

Gene SHOX, Length 1,951 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHOX-201ENST00000334060 HELTA6NFD8 242 aa12.28□□□□□ -0.44
SHOX-201ENST00000334060 WIPF1O43516 503 aa12.28□□□□□ -0.44
SHOX-201ENST00000334060 PSMB3P49720 205 aa12.28□□□□□ -0.44
SHOX-201ENST00000334060 SGK494Q96LW2 274 aa12.28□□□□□ -0.44
SHOX-201ENST00000334060 Q9H3A6 140 aa12.28□□□□□ -0.44
SHOX-201ENST00000334060 MEGF8Q7Z7M0 2845 aa12.28□□□□□ -0.44
SHOX-201ENST00000334060 MEF2BQ02080 365 aaPredicted RBP12.27□□□□□ -0.44
SHOX-201ENST00000334060 BEAN1Q3B7T3 259 aa12.27□□□□□ -0.44
SHOX-201ENST00000334060 MAP6D1Q9H9H5 199 aa12.27□□□□□ -0.44
SHOX-201ENST00000334060 RPH3ALQ9UNE2 315 aa12.27□□□□□ -0.44
SHOX-201ENST00000334060 KNCNA6PVL3 124 aa12.27□□□□□ -0.45
SHOX-201ENST00000334060 ESDP10768 282 aa12.27□□□□□ -0.45
SHOX-201ENST00000334060 DEFB131AP59861 70 aa12.27□□□□□ -0.45
SHOX-201ENST00000334060 ADIRFQ15847 76 aa12.27□□□□□ -0.45
SHOX-201ENST00000334060 A0A1W2PPQ1 181 aa12.26□□□□□ -0.45
SHOX-201ENST00000334060 LCN12Q6JVE5 192 aa12.26□□□□□ -0.45
SHOX-201ENST00000334060 TEX43Q6ZNM6 134 aa12.26□□□□□ -0.45
SHOX-201ENST00000334060 SPAG8Q99932 426 aaPredicted RBP12.26□□□□□ -0.45
SHOX-201ENST00000334060 MCRIP2Q9BUT9 160 aaKnown RBP12.26□□□□□ -0.45
SHOX-201ENST00000334060 INSL3P51460 131 aa12.25□□□□□ -0.45
SHOX-201ENST00000334060 RPL23P62829 140 aaKnown RBP12.25□□□□□ -0.45
SHOX-201ENST00000334060 SUMO1P63165 101 aaKnown RBP12.25□□□□□ -0.45
SHOX-201ENST00000334060 ZNF705AQ6ZN79 300 aaPredicted RBP12.25□□□□□ -0.45
SHOX-201ENST00000334060 DEFB125Q8N687 156 aa12.25□□□□□ -0.45
SHOX-201ENST00000334060 OR2D3Q8NGH3 330 aa12.25□□□□□ -0.45
SHOX-201ENST00000334060 LINC00479Q96M42 142 aa12.25□□□□□ -0.45
SHOX-201ENST00000334060 GPR82Q96P67 336 aa12.25□□□□□ -0.45
SHOX-201ENST00000334060 IGKV2-40A0A087WW87 121 aaPredicted RBP12.25□□□□□ -0.45
SHOX-201ENST00000334060 PGPA6NDG6 321 aa12.25□□□□□ -0.45
SHOX-201ENST00000334060 IGKV2D-40P01614 121 aaPredicted RBP12.25□□□□□ -0.45
SHOX-201ENST00000334060 EGFEM1PQ0D2K5 195 aa12.25□□□□□ -0.45
SHOX-201ENST00000334060 Q8N1Y9 231 aa12.25□□□□□ -0.45
SHOX-201ENST00000334060 BMI1P35226 326 aa12.24□□□□□ -0.45
SHOX-201ENST00000334060 ERCC8Q13216 396 aa12.24□□□□□ -0.45
SHOX-201ENST00000334060 CST9LP1Q5W188 147 aa12.24□□□□□ -0.45
SHOX-201ENST00000334060 TXNDC17Q9BRA2 123 aa12.24□□□□□ -0.45
SHOX-201ENST00000334060 TRAV8-1A0A0A6YYK1 113 aa12.23□□□□□ -0.45
SHOX-201ENST00000334060 TRAV25A0A0B4J276 109 aa12.23□□□□□ -0.45
SHOX-201ENST00000334060 IGKV3-20P01619 116 aa12.23□□□□□ -0.45
SHOX-201ENST00000334060 RPL19P84098 196 aaKnown RBP12.23□□□□□ -0.45
SHOX-201ENST00000334060 S100A7AQ86SG5 101 aa12.23□□□□□ -0.45
SHOX-201ENST00000334060 OR4B1Q8NGF8 309 aa12.23□□□□□ -0.45
SHOX-201ENST00000334060 ORAOV1Q8WV07 137 aa12.23□□□□□ -0.45
SHOX-201ENST00000334060 RBMY1BA6NDE4 496 aaKnown RBP12.22□□□□□ -0.45
SHOX-201ENST00000334060 RBMY1EA6NEQ0 496 aaKnown RBP12.22□□□□□ -0.45
SHOX-201ENST00000334060 RBMY1DP0C7P1 496 aaKnown RBP12.22□□□□□ -0.45
SHOX-201ENST00000334060 VGLL1Q99990 258 aa12.22□□□□□ -0.45
SHOX-201ENST00000334060 TMEM167BQ9NRX6 74 aa12.22□□□□□ -0.45
SHOX-201ENST00000334060 TRAV34A0A0B4J273 112 aa12.21□□□□□ -0.45
SHOX-201ENST00000334060 SCO2A0A1W2PP80 73 aa12.21□□□□□ -0.45
SHOX-201ENST00000334060 OR4C46A6NHA9 309 aa12.21□□□□□ -0.45
SHOX-201ENST00000334060 ISLRO14498 428 aa12.21□□□□□ -0.45
SHOX-201ENST00000334060 NPSP0C0P6 89 aa12.21□□□□□ -0.45
SHOX-201ENST00000334060 PSG3Q16557 428 aa12.21□□□□□ -0.45
SHOX-201ENST00000334060 ZNF738Q8NE65 137 aa12.21□□□□□ -0.45
SHOX-201ENST00000334060 RPUSD4Q96CM3 377 aaKnown RBP12.21□□□□□ -0.45
SHOX-201ENST00000334060 DERL1Q9BUN8 251 aa12.21□□□□□ -0.45
SHOX-201ENST00000334060 TRAPPC1Q9Y5R8 145 aa12.21□□□□□ -0.45
SHOX-201ENST00000334060 NBEAL2Q6ZNJ1 2754 aa12.21□□□□□ -0.45
SHOX-201ENST00000334060 KIR3DS1Q14943 382 aa12.21□□□□□ -0.46
SHOX-201ENST00000334060 OR2K2Q8NGT1 345 aa12.21□□□□□ -0.46
SHOX-201ENST00000334060 Q8TAT8 98 aa12.21□□□□□ -0.46
SHOX-201ENST00000334060 VAMP8Q9BV40 100 aa12.21□□□□□ -0.46
SHOX-201ENST00000334060 PDE6DO43924 150 aa12.2□□□□□ -0.46
SHOX-201ENST00000334060 SLC25A5P05141 298 aaKnown RBP12.2□□□□□ -0.46
SHOX-201ENST00000334060 S100A7P31151 101 aa12.2□□□□□ -0.46
SHOX-201ENST00000334060 PDE6HQ13956 83 aa12.2□□□□□ -0.46
SHOX-201ENST00000334060 CMTM2Q8TAZ6 248 aa12.2□□□□□ -0.46
SHOX-201ENST00000334060 C20orf202A1L168 122 aa12.19□□□□□ -0.46
SHOX-201ENST00000334060 OR11H12B2RN74 326 aa12.19□□□□□ -0.46
SHOX-201ENST00000334060 C11orf94C9JXX5 98 aa12.19□□□□□ -0.46
SHOX-201ENST00000334060 FXYD7P58549 80 aa12.19□□□□□ -0.46
SHOX-201ENST00000334060 COX19Q49B96 90 aa12.19□□□□□ -0.46
SHOX-201ENST00000334060 Q6ZQT7 251 aa12.19□□□□□ -0.46
SHOX-201ENST00000334060 GOLT1AQ6ZVE7 132 aa12.19□□□□□ -0.46
SHOX-201ENST00000334060 SLC50A1Q9BRV3 221 aa12.19□□□□□ -0.46
SHOX-201ENST00000334060 OTORQ9NRC9 128 aa12.19□□□□□ -0.46
SHOX-201ENST00000334060 AURKAIP1Q9NWT8 199 aaPredicted RBP12.19□□□□□ -0.46
SHOX-201ENST00000334060 A0A1W2PRE2 83 aa12.19□□□□□ -0.46
SHOX-201ENST00000334060 K7EP13 123 aa12.19□□□□□ -0.46
SHOX-201ENST00000334060 ZNF253O75346 499 aa12.19□□□□□ -0.46
SHOX-201ENST00000334060 CDKN1BP46527 198 aa12.19□□□□□ -0.46
SHOX-201ENST00000334060 RPS20P60866 119 aaKnown RBP12.19□□□□□ -0.46
SHOX-201ENST00000334060 PARLQ9H300 379 aa12.19□□□□□ -0.46
SHOX-201ENST00000334060 DIRC3C9JPN6 131 aa12.18□□□□□ -0.46
SHOX-201ENST00000334060 F6UZH7 168 aa12.18□□□□□ -0.46
SHOX-201ENST00000334060 PRKDCP78527 4128 aaKnown RBP12.18□□□□□ -0.46
SHOX-201ENST00000334060 SNRPD3P62318 126 aaKnown RBP12.18□□□□□ -0.46
SHOX-201ENST00000334060 PSG9Q00887 426 aa12.18□□□□□ -0.46
SHOX-201ENST00000334060 HIST1H1AQ02539 215 aaPredicted RBP12.18□□□□□ -0.46
SHOX-201ENST00000334060 OR5I1Q13606 314 aa12.18□□□□□ -0.46
SHOX-201ENST00000334060 DMRTA1Q5VZB9 504 aa12.18□□□□□ -0.46
SHOX-201ENST00000334060 AAMDCQ9H7C9 122 aa12.18□□□□□ -0.46
SHOX-201ENST00000334060 TRAV2A0A0B4J234 112 aa12.17□□□□□ -0.46
SHOX-201ENST00000334060 K7EIL1 84 aa12.17□□□□□ -0.46
SHOX-201ENST00000334060 IGLV2-11P01706 119 aa12.17□□□□□ -0.46
SHOX-201ENST00000334060 TCRAP04437 139 aa12.17□□□□□ -0.46
SHOX-201ENST00000334060 RPL35AP18077 110 aaKnown RBP12.17□□□□□ -0.46
SHOX-201ENST00000334060 EPDR1Q9UM22 224 aa12.17□□□□□ -0.46
SHOX-201ENST00000334060 A0A0J9YX75 114 aa12.16□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 98.4 ms