RNA–Protein interactions for RNA: ENST00000330374.6

VMA21-201, Transcript of VMA21, vacuolar ATPase assembly factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VMA21, Length 4,717 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMA21-201ENST00000330374 DEFB124Q8NES8 71 aa6.17□□□□□ -1.42
VMA21-201ENST00000330374 VKORC1Q9BQB6 163 aa6.17□□□□□ -1.42
VMA21-201ENST00000330374 UFC1Q9Y3C8 167 aa6.17□□□□□ -1.42
VMA21-201ENST00000330374 A0A1B0GW15 77 aa6.17□□□□□ -1.42
VMA21-201ENST00000330374 K7EM74 188 aa6.17□□□□□ -1.42
VMA21-201ENST00000330374 NDUFA3O95167 84 aa6.17□□□□□ -1.42
VMA21-201ENST00000330374 TMEM155Q4W5P6 130 aa6.17□□□□□ -1.42
VMA21-201ENST00000330374 DEFB104AQ8WTQ1 72 aa6.17□□□□□ -1.42
VMA21-201ENST00000330374 TLN1Q9Y490 2541 aaKnown RBP6.16□□□□□ -1.42
VMA21-201ENST00000330374 TRBV25-1A0A075B6N4 114 aa6.16□□□□□ -1.42
VMA21-201ENST00000330374 WI2-2373I1.2A0A1W2PRP0 233 aa6.16□□□□□ -1.42
VMA21-201ENST00000330374 TMEM8BA6NDV4 472 aa6.16□□□□□ -1.42
VMA21-201ENST00000330374 Q6AWC8 147 aa6.16□□□□□ -1.42
VMA21-201ENST00000330374 IGHV3-49A0A0A0MS15 119 aa6.16□□□□□ -1.42
VMA21-201ENST00000330374 TIMM23O14925 209 aa6.16□□□□□ -1.42
VMA21-201ENST00000330374 SPRY2O43597 315 aa6.16□□□□□ -1.42
VMA21-201ENST00000330374 IGKCP01834 107 aa6.16□□□□□ -1.42
VMA21-201ENST00000330374 OTOGLQ3ZCN5 2332 aa6.16□□□□□ -1.42
VMA21-201ENST00000330374 HOXB4P17483 251 aaPredicted RBP6.16□□□□□ -1.42
VMA21-201ENST00000330374 ZNF493Q6ZR52 646 aa6.16□□□□□ -1.42
VMA21-201ENST00000330374 SIGMAR1Q99720 223 aa6.16□□□□□ -1.42
VMA21-201ENST00000330374 ANKHD1Q8IWZ3 2542 aaKnown RBP6.16□□□□□ -1.42
VMA21-201ENST00000330374 SPTAN1Q13813 2472 aaKnown RBP6.16□□□□□ -1.42
VMA21-201ENST00000330374 HIST1H4GQ99525 98 aa6.16□□□□□ -1.42
VMA21-201ENST00000330374 CDIP1Q9H305 208 aa6.16□□□□□ -1.42
VMA21-201ENST00000330374 BUB1B-PAK6H3BSN5 160 aa6.15□□□□□ -1.42
VMA21-201ENST00000330374 GFRALQ6UXV0 394 aa6.15□□□□□ -1.42
VMA21-201ENST00000330374 ZNF562Q6V9R5 426 aa6.15□□□□□ -1.42
VMA21-201ENST00000330374 LINC00311Q8N616 119 aa6.15□□□□□ -1.42
VMA21-201ENST00000330374 PRR25Q96S07 402 aa6.15□□□□□ -1.42
VMA21-201ENST00000330374 MRPL35Q9NZE8 188 aaKnown RBP6.15□□□□□ -1.42
VMA21-201ENST00000330374 NCBP2LA6PVI3 153 aaKnown RBP6.15□□□□□ -1.42
VMA21-201ENST00000330374 C16orf97H3BN30 126 aa6.15□□□□□ -1.42
VMA21-201ENST00000330374 LY6HO94772 140 aa6.15□□□□□ -1.42
VMA21-201ENST00000330374 INSL3P51460 131 aa6.15□□□□□ -1.42
VMA21-201ENST00000330374 DLX6P56179 175 aa6.15□□□□□ -1.42
VMA21-201ENST00000330374 ATP5G2Q06055 141 aa6.15□□□□□ -1.42
VMA21-201ENST00000330374 RNF182Q8N6D2 247 aa6.15□□□□□ -1.42
VMA21-201ENST00000330374 MAPKAPK5-AS1Q8N8E1 139 aa6.15□□□□□ -1.42
VMA21-201ENST00000330374 ZNF479Q96JC4 524 aa6.15□□□□□ -1.42
VMA21-201ENST00000330374 HOXA3O43365 443 aaPredicted RBP6.15□□□□□ -1.43
VMA21-201ENST00000330374 EFNA4P52798 201 aa6.15□□□□□ -1.43
VMA21-201ENST00000330374 SIRPDQ9H106 197 aa6.15□□□□□ -1.43
VMA21-201ENST00000330374 SIVA1O15304 175 aa6.14□□□□□ -1.43
VMA21-201ENST00000330374 CRYGBP07316 175 aa6.14□□□□□ -1.43
VMA21-201ENST00000330374 GAGE12HA6NDE8 117 aa6.14□□□□□ -1.43
VMA21-201ENST00000330374 KLRD1Q13241 179 aa6.14□□□□□ -1.43
VMA21-201ENST00000330374 RNASE6Q93091 150 aaKnown RBP6.14□□□□□ -1.43
VMA21-201ENST00000330374 SPAG8Q99932 426 aaPredicted RBP6.14□□□□□ -1.43
VMA21-201ENST00000330374 HHLA3Q9XRX5 114 aa6.14□□□□□ -1.43
VMA21-201ENST00000330374 U3KQK5 164 aa6.14□□□□□ -1.43
VMA21-201ENST00000330374 CEP295Q9C0D2 2601 aa6.14□□□□□ -1.43
VMA21-201ENST00000330374 TRGV3P03979 118 aa6.14□□□□□ -1.43
VMA21-201ENST00000330374 PRAC2D3DTV9 90 aa6.14□□□□□ -1.43
VMA21-201ENST00000330374 DPM2O94777 84 aa6.14□□□□□ -1.43
VMA21-201ENST00000330374 CEND1Q8N111 149 aa6.14□□□□□ -1.43
VMA21-201ENST00000330374 TIMD4Q96H15 378 aa6.14□□□□□ -1.43
VMA21-201ENST00000330374 COL6A6A6NMZ7 2263 aa6.14□□□□□ -1.43
VMA21-201ENST00000330374 SMIM17P0DL12 118 aa6.13□□□□□ -1.43
VMA21-201ENST00000330374 RNF185Q96GF1 192 aa6.13□□□□□ -1.43
VMA21-201ENST00000330374 RALYQ9UKM9 306 aaKnown RBP6.13□□□□□ -1.43
VMA21-201ENST00000330374 MAP1AP78559 2803 aaPredicted RBP6.13□□□□□ -1.43
VMA21-201ENST00000330374 IGLL5B9A064 214 aa6.13□□□□□ -1.43
VMA21-201ENST00000330374 PAX8Q06710 450 aa6.13□□□□□ -1.43
VMA21-201ENST00000330374 PVRIGQ6DKI7 326 aa6.13□□□□□ -1.43
VMA21-201ENST00000330374 Q6ZQT7 251 aa6.13□□□□□ -1.43
VMA21-201ENST00000330374 MRPS12O15235 138 aaKnown RBP6.13□□□□□ -1.43
VMA21-201ENST00000330374 A0A1B0GWB2 263 aa6.13□□□□□ -1.43
VMA21-201ENST00000330374 IGLV1-47P01700 117 aa6.13□□□□□ -1.43
VMA21-201ENST00000330374 IL17RELQ6ZVW7 336 aa6.13□□□□□ -1.43
VMA21-201ENST00000330374 DTX2Q86UW9 622 aa6.13□□□□□ -1.43
VMA21-201ENST00000330374 DYNAPQ8N1N2 210 aa6.13□□□□□ -1.43
VMA21-201ENST00000330374 LYPD1Q8N2G4 141 aa6.13□□□□□ -1.43
VMA21-201ENST00000330374 CYSLTR1Q9Y271 337 aa6.13□□□□□ -1.43
VMA21-201ENST00000330374 IGFL2Q6UWQ7 119 aa6.12□□□□□ -1.43
VMA21-201ENST00000330374 ASCL5Q7RTU5 278 aa6.12□□□□□ -1.43
VMA21-201ENST00000330374 GATD1Q8NB37 220 aa6.12□□□□□ -1.43
VMA21-201ENST00000330374 NUP37Q8NFH4 326 aa6.12□□□□□ -1.43
VMA21-201ENST00000330374 MYOZ3Q8TDC0 251 aa6.12□□□□□ -1.43
VMA21-201ENST00000330374 A8MZ25 164 aa6.12□□□□□ -1.43
VMA21-201ENST00000330374 C12orf74Q32Q52 190 aa6.12□□□□□ -1.43
VMA21-201ENST00000330374 SPANXB1Q9NS25 103 aaPredicted RBP6.12□□□□□ -1.43
VMA21-201ENST00000330374 C21orf62Q9NYP8 219 aa6.12□□□□□ -1.43
VMA21-201ENST00000330374 TRBV6-1A0A0K0K1D8 114 aa6.11□□□□□ -1.43
VMA21-201ENST00000330374 J3QR89 54 aa6.11□□□□□ -1.43
VMA21-201ENST00000330374 TTC9CQ8N5M4 171 aa6.11□□□□□ -1.43
VMA21-201ENST00000330374 CHTOPQ9Y3Y2 248 aaKnown RBP6.11□□□□□ -1.43
VMA21-201ENST00000330374 NBR2O15453 112 aa6.11□□□□□ -1.43
VMA21-201ENST00000330374 RPL7P18124 248 aaKnown RBP6.11□□□□□ -1.43
VMA21-201ENST00000330374 GAGE13Q4V321 117 aa6.11□□□□□ -1.43
VMA21-201ENST00000330374 FOXI2Q6ZQN5 318 aa6.11□□□□□ -1.43
VMA21-201ENST00000330374 FAM110DQ8TAY7 271 aaPredicted RBP6.11□□□□□ -1.43
VMA21-201ENST00000330374 PHLDA1Q8WV24 401 aaPredicted RBP6.11□□□□□ -1.43
VMA21-201ENST00000330374 HIF1ANQ9NWT6 349 aa6.11□□□□□ -1.43
VMA21-201ENST00000330374 LOC107984156A0A0G2JMH3 177 aa6.11□□□□□ -1.43
VMA21-201ENST00000330374 FABP5P3A8MUU1 101 aa6.11□□□□□ -1.43
VMA21-201ENST00000330374 E7EQL1 145 aa6.11□□□□□ -1.43
VMA21-201ENST00000330374 ARL17AQ8IVW1 177 aa6.11□□□□□ -1.43
VMA21-201ENST00000330374 ZNF418Q8TF45 676 aaPredicted RBP6.11□□□□□ -1.43
VMA21-201ENST00000330374 NXT2Q9NPJ8 142 aaKnown RBP6.11□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms