RNA–Protein interactions for RNA: ENST00000329231.8

ATPAF1-201, Transcript of ATP synthase mitochondrial F1 complex assembly factor 1, humanhuman

TSL 2 BASIC

Gene ATPAF1, Length 1,241 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATPAF1-201ENST00000329231 SSX7Q7RTT5 188 aa19.45■□□□□ 0.7
ATPAF1-201ENST00000329231 UBE2DNLQ8IWF7 75 aa19.45■□□□□ 0.7
ATPAF1-201ENST00000329231 ARL6IP6Q8N6S5 226 aa19.45■□□□□ 0.7
ATPAF1-201ENST00000329231 SUN5Q8TC36 379 aa19.45■□□□□ 0.7
ATPAF1-201ENST00000329231 ZNF471Q9BX82 626 aaPredicted RBP19.45■□□□□ 0.7
ATPAF1-201ENST00000329231 CTXND1A0A1B0GTU2 59 aa19.44■□□□□ 0.7
ATPAF1-201ENST00000329231 RGS13O14921 159 aa19.44■□□□□ 0.7
ATPAF1-201ENST00000329231 PFDN1O60925 122 aa19.44■□□□□ 0.7
ATPAF1-201ENST00000329231 AKAP14Q86UN6 197 aa19.44■□□□□ 0.7
ATPAF1-201ENST00000329231 LENEPQ9Y5L5 61 aa19.44■□□□□ 0.7
ATPAF1-201ENST00000329231 EPPK1P58107 5090 aaKnown RBP19.44■□□□□ 0.7
ATPAF1-201ENST00000329231 ZNF726P1Q15940 193 aa19.43■□□□□ 0.7
ATPAF1-201ENST00000329231 TMED6Q8WW62 240 aa19.43■□□□□ 0.7
ATPAF1-201ENST00000329231 TMEM167BQ9NRX6 74 aa19.43■□□□□ 0.7
ATPAF1-201ENST00000329231 GAGE12BA1L429 117 aa19.42■□□□□ 0.7
ATPAF1-201ENST00000329231 GAGE7O76087 117 aa19.42■□□□□ 0.7
ATPAF1-201ENST00000329231 C1QBP02746 253 aa19.42■□□□□ 0.7
ATPAF1-201ENST00000329231 GAGE12FP0CL80 117 aa19.42■□□□□ 0.7
ATPAF1-201ENST00000329231 GAGE12GP0CL81 117 aa19.42■□□□□ 0.7
ATPAF1-201ENST00000329231 GAGE12IP0CL82 117 aa19.42■□□□□ 0.7
ATPAF1-201ENST00000329231 EIF5AP63241 154 aaKnown RBP19.42■□□□□ 0.7
ATPAF1-201ENST00000329231 RNF212Q495C1 297 aa19.42■□□□□ 0.7
ATPAF1-201ENST00000329231 C11orf72Q8NBR9 251 aa19.42■□□□□ 0.7
ATPAF1-201ENST00000329231 GSN-AS1Q9NRJ2 163 aa19.42■□□□□ 0.7
ATPAF1-201ENST00000329231 RPH3ALQ9UNE2 315 aa19.42■□□□□ 0.7
ATPAF1-201ENST00000329231 IGHV1OR15-1A0A075B7D0 117 aa19.41■□□□□ 0.7
ATPAF1-201ENST00000329231 SEC11BP0C7V7 166 aa19.41■□□□□ 0.7
ATPAF1-201ENST00000329231 IBA57Q5T440 356 aaKnown RBP19.39■□□□□ 0.69
ATPAF1-201ENST00000329231 GOLT1AQ6ZVE7 132 aa19.39■□□□□ 0.69
ATPAF1-201ENST00000329231 TCL1AP56279 114 aa19.38■□□□□ 0.69
ATPAF1-201ENST00000329231 LGALSLQ3ZCW2 172 aaPredicted RBP19.38■□□□□ 0.69
ATPAF1-201ENST00000329231 Q6ZQT7 251 aa19.38■□□□□ 0.69
ATPAF1-201ENST00000329231 Q6ZTI0 123 aa19.38■□□□□ 0.69
ATPAF1-201ENST00000329231 IQCF2Q8IXL9 164 aa19.38■□□□□ 0.69
ATPAF1-201ENST00000329231 NUDT3O95989 172 aa19.37■□□□□ 0.69
ATPAF1-201ENST00000329231 TPT1P13693 172 aaKnown RBP19.37■□□□□ 0.69
ATPAF1-201ENST00000329231 OR5I1Q13606 314 aa19.37■□□□□ 0.69
ATPAF1-201ENST00000329231 DNAH6Q9C0G6 4158 aa19.36■□□□□ 0.69
ATPAF1-201ENST00000329231 UMAD1C9J7I0 102 aa19.36■□□□□ 0.69
ATPAF1-201ENST00000329231 Q6AWC8 147 aa19.36■□□□□ 0.69
ATPAF1-201ENST00000329231 STOML3Q8TAV4 291 aa19.36■□□□□ 0.69
ATPAF1-201ENST00000329231 TP53TG3Q9ULZ0 132 aa19.36■□□□□ 0.69
ATPAF1-201ENST00000329231 KLF12Q9Y4X4 402 aa19.36■□□□□ 0.69
ATPAF1-201ENST00000329231 TRGV2A0A075B6R0 118 aa19.35■□□□□ 0.69
ATPAF1-201ENST00000329231 TRGV1A0A0A0MS02 117 aa19.35■□□□□ 0.69
ATPAF1-201ENST00000329231 SERTM2A0A1B0GWG4 89 aa19.35■□□□□ 0.69
ATPAF1-201ENST00000329231 MAP1LC3B2A6NCE7 125 aa19.35■□□□□ 0.69
ATPAF1-201ENST00000329231 C5orf17Q8NAS9 161 aa19.35■□□□□ 0.69
ATPAF1-201ENST00000329231 ATG101Q9BSB4 218 aa19.35■□□□□ 0.69
ATPAF1-201ENST00000329231 MAP1LC3BQ9GZQ8 125 aa19.35■□□□□ 0.69
ATPAF1-201ENST00000329231 FGF8P55075 233 aaPredicted RBP19.34■□□□□ 0.69
ATPAF1-201ENST00000329231 FAM3BP58499 235 aaPredicted RBP19.34■□□□□ 0.69
ATPAF1-201ENST00000329231 GNG5P63218 68 aa19.34■□□□□ 0.69
ATPAF1-201ENST00000329231 C18orf15Q96N68 181 aa19.34■□□□□ 0.69
ATPAF1-201ENST00000329231 TMPRSS5Q9H3S3 457 aa19.34■□□□□ 0.69
ATPAF1-201ENST00000329231 A0A1W2PRE2 83 aa19.33■□□□□ 0.68
ATPAF1-201ENST00000329231 SPINK4O60575 86 aa19.33■□□□□ 0.68
ATPAF1-201ENST00000329231 FHITP49789 147 aa19.33■□□□□ 0.68
ATPAF1-201ENST00000329231 ZNF415Q09FC8 603 aa19.33■□□□□ 0.68
ATPAF1-201ENST00000329231 MUC21Q5SSG8 566 aa19.33■□□□□ 0.68
ATPAF1-201ENST00000329231 TRAV26-1A0A087WT03 109 aa19.32■□□□□ 0.68
ATPAF1-201ENST00000329231 TRAV8-1A0A0A6YYK1 113 aa19.32■□□□□ 0.68
ATPAF1-201ENST00000329231 A0A1B0GVG6 124 aa19.32■□□□□ 0.68
ATPAF1-201ENST00000329231 GGTLC3B5MD39 225 aa19.32■□□□□ 0.68
ATPAF1-201ENST00000329231 K7EQM0 130 aa19.32■□□□□ 0.68
ATPAF1-201ENST00000329231 HOXA5P20719 270 aa19.32■□□□□ 0.68
ATPAF1-201ENST00000329231 SUMO1P63165 101 aaKnown RBP19.32■□□□□ 0.68
ATPAF1-201ENST00000329231 LGALS9BQ3B8N2 356 aa19.32■□□□□ 0.68
ATPAF1-201ENST00000329231 FAM159AQ6UWV7 190 aa19.32■□□□□ 0.68
ATPAF1-201ENST00000329231 DPPA3Q6W0C5 159 aa19.32■□□□□ 0.68
ATPAF1-201ENST00000329231 M0R2N4 97 aa19.31■□□□□ 0.68
ATPAF1-201ENST00000329231 TCRAP04437 139 aa19.31■□□□□ 0.68
ATPAF1-201ENST00000329231 TREM1Q9NP99 234 aa19.31■□□□□ 0.68
ATPAF1-201ENST00000329231 BIRC6Q9NR09 4857 aa19.3■□□□□ 0.68
ATPAF1-201ENST00000329231 CCL18P55774 89 aa19.3■□□□□ 0.68
ATPAF1-201ENST00000329231 FAM213BQ8TBF2 198 aa19.3■□□□□ 0.68
ATPAF1-201ENST00000329231 NDFIP1Q9BT67 221 aa19.3■□□□□ 0.68
ATPAF1-201ENST00000329231 EIF5AL1Q6IS14 154 aaKnown RBP19.29■□□□□ 0.68
ATPAF1-201ENST00000329231 MBD3L1Q8WWY6 194 aa19.29■□□□□ 0.68
ATPAF1-201ENST00000329231 EPDR1Q9UM22 224 aa19.29■□□□□ 0.68
ATPAF1-201ENST00000329231 IGLV2-18A0A075B6J9 118 aa19.28■□□□□ 0.68
ATPAF1-201ENST00000329231 TRGV11A0A075B6L2 103 aa19.28■□□□□ 0.68
ATPAF1-201ENST00000329231 TRAV21A0A0B4J279 112 aa19.28■□□□□ 0.68
ATPAF1-201ENST00000329231 A0A0J9YY99 117 aa19.28■□□□□ 0.68
ATPAF1-201ENST00000329231 H3BNG1 76 aa19.28■□□□□ 0.68
ATPAF1-201ENST00000329231 UBE2G2P60604 165 aa19.28■□□□□ 0.68
ATPAF1-201ENST00000329231 ZFP69Q49AA0 526 aa19.28■□□□□ 0.68
ATPAF1-201ENST00000329231 TVP23CQ96ET8 276 aa19.28■□□□□ 0.68
ATPAF1-201ENST00000329231 NKX6-2Q9C056 277 aaPredicted RBP19.28■□□□□ 0.68
ATPAF1-201ENST00000329231 NAGKQ9UJ70 344 aa19.28■□□□□ 0.68
ATPAF1-201ENST00000329231 TMEM183BQ1AE95 376 aa19.27■□□□□ 0.68
ATPAF1-201ENST00000329231 TDRG1Q3Y452 100 aa19.27■□□□□ 0.68
ATPAF1-201ENST00000329231 SLC51BQ86UW2 128 aa19.27■□□□□ 0.68
ATPAF1-201ENST00000329231 TMEM183AQ8IXX5 376 aa19.27■□□□□ 0.68
ATPAF1-201ENST00000329231 C9orf62Q8N4C0 152 aa19.27■□□□□ 0.68
ATPAF1-201ENST00000329231 SFT2D1Q8WV19 159 aa19.27■□□□□ 0.68
ATPAF1-201ENST00000329231 SGK494Q96LW2 274 aa19.27■□□□□ 0.68
ATPAF1-201ENST00000329231 MRPL16Q9NX20 251 aaKnown RBP19.27■□□□□ 0.68
ATPAF1-201ENST00000329231 FAM74A7A6NL05 159 aa19.26■□□□□ 0.67
ATPAF1-201ENST00000329231 F6UZH7 168 aa19.26■□□□□ 0.67
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms