RNA–Protein interactions for RNA: ENST00000327554.2

CCDC60-201, Transcript of coiled-coil domain containing 60, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene CCDC60, Length 2,450 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC60-201ENST00000327554 BUB1B-PAK6H3BSN5 160 aa9.88□□□□□ -0.83
CCDC60-201ENST00000327554 CNIH1O95406 144 aa9.88□□□□□ -0.83
CCDC60-201ENST00000327554 TEN1Q86WV5 123 aa9.88□□□□□ -0.83
CCDC60-201ENST00000327554 CFHR4Q92496 578 aa9.88□□□□□ -0.83
CCDC60-201ENST00000327554 TRAV17A0A0B4J275 112 aa9.87□□□□□ -0.83
CCDC60-201ENST00000327554 RPL7P18124 248 aaKnown RBP9.87□□□□□ -0.83
CCDC60-201ENST00000327554 ADIPOQQ15848 244 aa9.87□□□□□ -0.83
CCDC60-201ENST00000327554 TMEM78Q5T7P6 136 aa9.87□□□□□ -0.83
CCDC60-201ENST00000327554 SFTA2Q6UW10 78 aa9.87□□□□□ -0.83
CCDC60-201ENST00000327554 IGFL2Q6UWQ7 119 aa9.87□□□□□ -0.83
CCDC60-201ENST00000327554 IGKV3D-20A0A0C4DH25 116 aa9.87□□□□□ -0.83
CCDC60-201ENST00000327554 FAM27E3Q08E93 113 aa9.87□□□□□ -0.83
CCDC60-201ENST00000327554 ERCC8Q13216 396 aa9.87□□□□□ -0.83
CCDC60-201ENST00000327554 ASCL5Q7RTU5 278 aa9.87□□□□□ -0.83
CCDC60-201ENST00000327554 DYNAPQ8N1N2 210 aa9.87□□□□□ -0.83
CCDC60-201ENST00000327554 C11orf21Q9P2W6 132 aa9.87□□□□□ -0.83
CCDC60-201ENST00000327554 FAM215AQ9Y5M1 114 aa9.87□□□□□ -0.83
CCDC60-201ENST00000327554 DMXL2Q8TDJ6 3036 aa9.86□□□□□ -0.83
CCDC60-201ENST00000327554 LOC107984156A0A0G2JMH3 177 aa9.86□□□□□ -0.83
CCDC60-201ENST00000327554 PRSS29PA6NIE9 313 aa9.86□□□□□ -0.83
CCDC60-201ENST00000327554 ARL17AQ8IVW1 177 aa9.86□□□□□ -0.83
CCDC60-201ENST00000327554 KAAG1Q9UBP8 84 aa9.86□□□□□ -0.83
CCDC60-201ENST00000327554 SS18L2Q9UHA2 77 aa9.86□□□□□ -0.83
CCDC60-201ENST00000327554 PRAC2D3DTV9 90 aa9.85□□□□□ -0.83
CCDC60-201ENST00000327554 TNRC18O15417 2968 aaPredicted RBP9.85□□□□□ -0.83
CCDC60-201ENST00000327554 A6NJY4 79 aa9.85□□□□□ -0.83
CCDC60-201ENST00000327554 CD7P09564 240 aa9.85□□□□□ -0.83
CCDC60-201ENST00000327554 SBSPONQ8IVN8 264 aa9.85□□□□□ -0.83
CCDC60-201ENST00000327554 PLEKHB2Q96CS7 222 aa9.85□□□□□ -0.83
CCDC60-201ENST00000327554 FANCD2OSQ96PS1 177 aa9.85□□□□□ -0.83
CCDC60-201ENST00000327554 ANAPC13Q9BS18 74 aa9.85□□□□□ -0.83
CCDC60-201ENST00000327554 RAXQ9Y2V3 346 aa9.85□□□□□ -0.83
CCDC60-201ENST00000327554 ROS1P08922 2347 aa9.85□□□□□ -0.83
CCDC60-201ENST00000327554 MFAP4P55083 255 aa9.84□□□□□ -0.83
CCDC60-201ENST00000327554 NEXN-AS1Q8NBZ9 246 aa9.84□□□□□ -0.83
CCDC60-201ENST00000327554 PRADC1Q9BSG0 188 aa9.84□□□□□ -0.83
CCDC60-201ENST00000327554 IGHV7-4-1A0A0J9YVY3 117 aa9.84□□□□□ -0.83
CCDC60-201ENST00000327554 RNF5Q99942 180 aa9.84□□□□□ -0.83
CCDC60-201ENST00000327554 IGLV11-55A0A075B6I3 123 aa9.83□□□□□ -0.84
CCDC60-201ENST00000327554 TCL1BO95988 128 aa9.83□□□□□ -0.84
CCDC60-201ENST00000327554 CD59P13987 128 aa9.83□□□□□ -0.84
CCDC60-201ENST00000327554 COX6B1P14854 86 aa9.83□□□□□ -0.84
CCDC60-201ENST00000327554 OR11H6Q8NGC7 330 aa9.83□□□□□ -0.84
CCDC60-201ENST00000327554 VCX2Q9H322 139 aa9.83□□□□□ -0.84
CCDC60-201ENST00000327554 ZNF815PA8K554 130 aa9.83□□□□□ -0.84
CCDC60-201ENST00000327554 ZNF688P0C7X2 276 aa9.83□□□□□ -0.84
CCDC60-201ENST00000327554 GAGE5Q13069 117 aa9.83□□□□□ -0.84
CCDC60-201ENST00000327554 GAGE6Q13070 117 aa9.83□□□□□ -0.84
CCDC60-201ENST00000327554 CITED1Q99966 193 aa9.83□□□□□ -0.84
CCDC60-201ENST00000327554 SMIM2Q9BVW6 85 aa9.83□□□□□ -0.84
CCDC60-201ENST00000327554 ARRDC1-AS1Q9H2J1 176 aa9.83□□□□□ -0.84
CCDC60-201ENST00000327554 UFC1Q9Y3C8 167 aa9.83□□□□□ -0.84
CCDC60-201ENST00000327554 LY6LH3BQJ8 138 aa9.82□□□□□ -0.84
CCDC60-201ENST00000327554 COX7A1P24310 79 aa9.82□□□□□ -0.84
CCDC60-201ENST00000327554 SCGB3A1Q96QR1 104 aa9.82□□□□□ -0.84
CCDC60-201ENST00000327554 KIR2DL4Q99706 377 aa9.82□□□□□ -0.84
CCDC60-201ENST00000327554 KLK15Q9H2R5 256 aa9.82□□□□□ -0.84
CCDC60-201ENST00000327554 ZDBF2Q9HCK1 2354 aa9.82□□□□□ -0.84
CCDC60-201ENST00000327554 NHLRC4P0CG21 123 aaPredicted RBP9.82□□□□□ -0.84
CCDC60-201ENST00000327554 ZFAND6Q6FIF0 208 aa9.82□□□□□ -0.84
CCDC60-201ENST00000327554 TOMM6Q96B49 74 aa9.82□□□□□ -0.84
CCDC60-201ENST00000327554 TIMM23O14925 209 aa9.81□□□□□ -0.84
CCDC60-201ENST00000327554 IGHV3-23P01764 117 aa9.81□□□□□ -0.84
CCDC60-201ENST00000327554 NDUFA11Q86Y39 141 aa9.81□□□□□ -0.84
CCDC60-201ENST00000327554 ANKRD29Q8N6D5 301 aa9.81□□□□□ -0.84
CCDC60-201ENST00000327554 RASL10AQ92737 203 aa9.81□□□□□ -0.84
CCDC60-201ENST00000327554 VKORC1Q9BQB6 163 aa9.81□□□□□ -0.84
CCDC60-201ENST00000327554 IGHV4-4A0A075B6R2 117 aa9.81□□□□□ -0.84
CCDC60-201ENST00000327554 A8MWV9 139 aa9.81□□□□□ -0.84
CCDC60-201ENST00000327554 SLC25A16P16260 332 aa9.81□□□□□ -0.84
CCDC60-201ENST00000327554 SRSF9Q13242 221 aaKnown RBP eCLIP9.81□□□□□ -0.84
CCDC60-201ENST00000327554 LYRM7Q5U5X0 104 aa9.81□□□□□ -0.84
CCDC60-201ENST00000327554 SCGB1D4Q6XE38 83 aa9.81□□□□□ -0.84
CCDC60-201ENST00000327554 C1orf210Q8IVY1 113 aa9.81□□□□□ -0.84
CCDC60-201ENST00000327554 C21orf62Q9NYP8 219 aa9.81□□□□□ -0.84
CCDC60-201ENST00000327554 PKDREJQ9NTG1 2253 aa9.8□□□□□ -0.84
CCDC60-201ENST00000327554 FAM90A27PA6NNH2 459 aa9.8□□□□□ -0.84
CCDC60-201ENST00000327554 NBR2O15453 112 aa9.8□□□□□ -0.84
CCDC60-201ENST00000327554 RNF182Q8N6D2 247 aa9.8□□□□□ -0.84
CCDC60-201ENST00000327554 BAALCQ8WXS3 180 aa9.8□□□□□ -0.84
CCDC60-201ENST00000327554 RALYQ9UKM9 306 aaKnown RBP9.8□□□□□ -0.84
CCDC60-201ENST00000327554 RBAKDNA6NC62 111 aa9.8□□□□□ -0.84
CCDC60-201ENST00000327554 TEX29Q8N6K0 151 aa9.8□□□□□ -0.84
CCDC60-201ENST00000327554 TRBV20-1A0A075B6N2 111 aa9.79□□□□□ -0.84
CCDC60-201ENST00000327554 IGHV3OR16-8A0A075B7F1 116 aa9.79□□□□□ -0.84
CCDC60-201ENST00000327554 B5MCH6 92 aa9.79□□□□□ -0.84
CCDC60-201ENST00000327554 CTSGP08311 255 aa9.79□□□□□ -0.84
CCDC60-201ENST00000327554 SRD5A1P18405 259 aa9.79□□□□□ -0.84
CCDC60-201ENST00000327554 ORMDL2Q53FV1 153 aa9.79□□□□□ -0.84
CCDC60-201ENST00000327554 KLHL30-AS1Q8NEE0 82 aa9.79□□□□□ -0.84
CCDC60-201ENST00000327554 BSPH1Q075Z2 132 aa9.79□□□□□ -0.84
CCDC60-201ENST00000327554 Q6ZQT7 251 aa9.79□□□□□ -0.84
CCDC60-201ENST00000327554 IGFBPL1Q8WX77 278 aa9.79□□□□□ -0.84
CCDC60-201ENST00000327554 AGPAT4-IT1Q9H0P7 198 aa9.79□□□□□ -0.84
CCDC60-201ENST00000327554 GPR179Q6PRD1 2367 aa9.79□□□□□ -0.84
CCDC60-201ENST00000327554 MUC3AQ02505 3323 aa9.79□□□□□ -0.84
CCDC60-201ENST00000327554 BOD1L1Q8NFC6 3051 aa9.78□□□□□ -0.84
CCDC60-201ENST00000327554 TMEM262E9PQX1 116 aa9.78□□□□□ -0.84
CCDC60-201ENST00000327554 RNASE6Q93091 150 aaKnown RBP9.78□□□□□ -0.84
CCDC60-201ENST00000327554 SLC50A1Q9BRV3 221 aa9.78□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 42.6 ms