RNA–Protein interactions for RNA: ENST00000326470.9

SSH1-201, Transcript of slingshot protein phosphatase 1, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene SSH1, Length 2,432 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSH1-201ENST00000326470 F8W1H4 67 aa12.91□□□□□ -0.34
SSH1-201ENST00000326470 LAGE3Q14657 143 aa12.91□□□□□ -0.34
SSH1-201ENST00000326470 IGHV3OR16-8A0A075B7F1 116 aa12.91□□□□□ -0.34
SSH1-201ENST00000326470 TRGV3P03979 118 aa12.91□□□□□ -0.34
SSH1-201ENST00000326470 NRACQ8N912 160 aa12.91□□□□□ -0.34
SSH1-201ENST00000326470 CHTOPQ9Y3Y2 248 aaKnown RBP12.91□□□□□ -0.34
SSH1-201ENST00000326470 A0A087WX48 190 aa12.9□□□□□ -0.34
SSH1-201ENST00000326470 C11orf21Q9P2W6 132 aa12.9□□□□□ -0.34
SSH1-201ENST00000326470 POLEQ07864 2286 aa12.9□□□□□ -0.34
SSH1-201ENST00000326470 M0R1W7 72 aa12.9□□□□□ -0.34
SSH1-201ENST00000326470 CIDEAO60543 219 aa12.9□□□□□ -0.34
SSH1-201ENST00000326470 IGHV3-35A0A0C4DH35 117 aa12.89□□□□□ -0.35
SSH1-201ENST00000326470 K7EMI3 77 aa12.89□□□□□ -0.35
SSH1-201ENST00000326470 PRTN3P24158 256 aa12.89□□□□□ -0.35
SSH1-201ENST00000326470 RAB9AP51151 201 aa12.89□□□□□ -0.35
SSH1-201ENST00000326470 C12orf74Q32Q52 190 aa12.89□□□□□ -0.35
SSH1-201ENST00000326470 RNF182Q8N6D2 247 aa12.89□□□□□ -0.35
SSH1-201ENST00000326470 Q8N6K4 173 aa12.89□□□□□ -0.35
SSH1-201ENST00000326470 Q8NA96 180 aa12.89□□□□□ -0.35
SSH1-201ENST00000326470 ZNF479Q96JC4 524 aa12.89□□□□□ -0.35
SSH1-201ENST00000326470 SPANXB1Q9NS25 103 aaPredicted RBP12.89□□□□□ -0.35
SSH1-201ENST00000326470 BUB3O43684 328 aa12.89□□□□□ -0.35
SSH1-201ENST00000326470 SCGB1A1P11684 91 aa12.89□□□□□ -0.35
SSH1-201ENST00000326470 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa12.89□□□□□ -0.35
SSH1-201ENST00000326470 WFDC2Q14508 124 aa12.88□□□□□ -0.35
SSH1-201ENST00000326470 CCDC144NLQ6NUI1 221 aa12.88□□□□□ -0.35
SSH1-201ENST00000326470 SIGMAR1Q99720 223 aa12.88□□□□□ -0.35
SSH1-201ENST00000326470 SLC50A1Q9BRV3 221 aa12.88□□□□□ -0.35
SSH1-201ENST00000326470 AGPAT4-IT1Q9H0P7 198 aa12.88□□□□□ -0.35
SSH1-201ENST00000326470 IGHV7-4-1A0A0J9YVY3 117 aa12.88□□□□□ -0.35
SSH1-201ENST00000326470 AZU1P20160 251 aa12.88□□□□□ -0.35
SSH1-201ENST00000326470 PLNP26678 52 aa12.88□□□□□ -0.35
SSH1-201ENST00000326470 ZFAND3Q9H8U3 227 aa12.88□□□□□ -0.35
SSH1-201ENST00000326470 MSRB2Q9Y3D2 182 aa12.88□□□□□ -0.35
SSH1-201ENST00000326470 K7ENP7 123 aa12.87□□□□□ -0.35
SSH1-201ENST00000326470 IGHV7-81A0A0B4J1V7 117 aa12.87□□□□□ -0.35
SSH1-201ENST00000326470 TRAV26-2A0A0B4J265 109 aa12.87□□□□□ -0.35
SSH1-201ENST00000326470 J3QR89 54 aa12.87□□□□□ -0.35
SSH1-201ENST00000326470 EBI3Q14213 229 aa12.87□□□□□ -0.35
SSH1-201ENST00000326470 CD300EQ496F6 205 aaPredicted RBP12.87□□□□□ -0.35
SSH1-201ENST00000326470 IGHV4-4A0A075B6R2 117 aa12.86□□□□□ -0.35
SSH1-201ENST00000326470 ZNF502Q8TBZ5 544 aa12.86□□□□□ -0.35
SSH1-201ENST00000326470 HIST1H4GQ99525 98 aa12.86□□□□□ -0.35
SSH1-201ENST00000326470 GTSF1LQ9H1H1 148 aa12.86□□□□□ -0.35
SSH1-201ENST00000326470 UFC1Q9Y3C8 167 aa12.86□□□□□ -0.35
SSH1-201ENST00000326470 ARHGAP32A7KAX9 2087 aa12.86□□□□□ -0.35
SSH1-201ENST00000326470 H3BMG7 143 aa12.86□□□□□ -0.35
SSH1-201ENST00000326470 VMO1Q7Z5L0 202 aa12.86□□□□□ -0.35
SSH1-201ENST00000326470 LINC01560Q8TB33 94 aa12.86□□□□□ -0.35
SSH1-201ENST00000326470 TSSC4Q9Y5U2 329 aaPredicted RBP12.86□□□□□ -0.35
SSH1-201ENST00000326470 GAGE12HA6NDE8 117 aa12.85□□□□□ -0.35
SSH1-201ENST00000326470 LINC01619G3V211 115 aa12.85□□□□□ -0.35
SSH1-201ENST00000326470 EFNA4P52798 201 aa12.85□□□□□ -0.35
SSH1-201ENST00000326470 TRBV7-3A0A075B6L6 115 aa12.84□□□□□ -0.35
SSH1-201ENST00000326470 TRAV12-1A0A0B4J245 112 aa12.84□□□□□ -0.35
SSH1-201ENST00000326470 OOSP1A8MZH6 123 aa12.84□□□□□ -0.35
SSH1-201ENST00000326470 LY6HO94772 140 aa12.84□□□□□ -0.35
SSH1-201ENST00000326470 C15orf32Q32M92 178 aa12.84□□□□□ -0.35
SSH1-201ENST00000326470 PTPRQQ9UMZ3 2332 aa12.84□□□□□ -0.35
SSH1-201ENST00000326470 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP12.84□□□□□ -0.35
SSH1-201ENST00000326470 H7C1H1 209 aa12.84□□□□□ -0.35
SSH1-201ENST00000326470 TMEM11P17152 192 aa12.84□□□□□ -0.35
SSH1-201ENST00000326470 RRN3P1Q2M238 152 aa12.84□□□□□ -0.35
SSH1-201ENST00000326470 TMEM78Q5T7P6 136 aa12.84□□□□□ -0.35
SSH1-201ENST00000326470 TACC2O95359 2948 aa12.83□□□□□ -0.35
SSH1-201ENST00000326470 A0A1B0GWB2 263 aa12.83□□□□□ -0.35
SSH1-201ENST00000326470 CLPSL1A2RUU4 121 aa12.83□□□□□ -0.35
SSH1-201ENST00000326470 F8VRH5 84 aa12.83□□□□□ -0.35
SSH1-201ENST00000326470 GOSR1O95249 250 aa12.83□□□□□ -0.35
SSH1-201ENST00000326470 CLEC3BP05452 202 aa12.83□□□□□ -0.35
SSH1-201ENST00000326470 MRPL53Q96EL3 112 aaKnown RBP12.83□□□□□ -0.35
SSH1-201ENST00000326470 TIMD4Q96H15 378 aa12.83□□□□□ -0.35
SSH1-201ENST00000326470 TRAV8-2A0A0B4J237 113 aa12.83□□□□□ -0.36
SSH1-201ENST00000326470 IGHV3-66A0A0C4DH42 116 aa12.83□□□□□ -0.36
SSH1-201ENST00000326470 ZNF207O43670 478 aaKnown RBP12.83□□□□□ -0.36
SSH1-201ENST00000326470 SPANXN1Q5VSR9 72 aa12.83□□□□□ -0.36
SSH1-201ENST00000326470 FAM110DQ8TAY7 271 aaPredicted RBP12.83□□□□□ -0.36
SSH1-201ENST00000326470 SPATA25Q9BR10 227 aa12.83□□□□□ -0.36
SSH1-201ENST00000326470 RELNP78509 3460 aa12.82□□□□□ -0.36
SSH1-201ENST00000326470 WNK2Q9Y3S1 2297 aa12.82□□□□□ -0.36
SSH1-201ENST00000326470 UCNP55089 124 aa12.82□□□□□ -0.36
SSH1-201ENST00000326470 SMAGPQ0VAQ4 97 aa12.82□□□□□ -0.36
SSH1-201ENST00000326470 ETDBQ3ZM63 59 aa12.82□□□□□ -0.36
SSH1-201ENST00000326470 PRR30Q53SZ7 412 aaPredicted RBP12.82□□□□□ -0.36
SSH1-201ENST00000326470 AMTNQ6UX39 209 aa12.82□□□□□ -0.36
SSH1-201ENST00000326470 SH2D6Q7Z4S9 175 aa12.82□□□□□ -0.36
SSH1-201ENST00000326470 MRAP2Q96G30 205 aa12.82□□□□□ -0.36
SSH1-201ENST00000326470 HIF1ANQ9NWT6 349 aa12.82□□□□□ -0.36
SSH1-201ENST00000326470 TLN1Q9Y490 2541 aaKnown RBP12.82□□□□□ -0.36
SSH1-201ENST00000326470 AGRNO00468 2067 aa12.82□□□□□ -0.36
SSH1-201ENST00000326470 GAGE13Q4V321 117 aa12.82□□□□□ -0.36
SSH1-201ENST00000326470 MINOS1Q5TGZ0 78 aa12.82□□□□□ -0.36
SSH1-201ENST00000326470 Q8N9W7 124 aa12.82□□□□□ -0.36
SSH1-201ENST00000326470 SPAG8Q99932 426 aaPredicted RBP12.82□□□□□ -0.36
SSH1-201ENST00000326470 SMIM2Q9BVW6 85 aa12.82□□□□□ -0.36
SSH1-201ENST00000326470 PRO0461Q9UI25 63 aa12.82□□□□□ -0.36
SSH1-201ENST00000326470 MINOS1-NBL1R4GNA1 71 aa12.82□□□□□ -0.36
SSH1-201ENST00000326470 MYMXA0A1B0GTQ4 84 aa12.81□□□□□ -0.36
SSH1-201ENST00000326470 OR11H12B2RN74 326 aa12.81□□□□□ -0.36
SSH1-201ENST00000326470 KLK9Q2XQG4 91 aa12.81□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 42.6 ms