RNA–Protein interactions for RNA: ENST00000320936.9

CIRBP-201, Transcript of cold inducible RNA binding protein, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CIRBP, Length 1,328 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIRBP-201ENST00000320936 LYRM9A8MSI8 78 aa13.35□□□□□ -0.27
CIRBP-201ENST00000320936 SNURFLB1AK76 121 aa13.35□□□□□ -0.27
CIRBP-201ENST00000320936 DEFB130BP0DP73 79 aa13.35□□□□□ -0.27
CIRBP-201ENST00000320936 DEFB130AP0DP74 79 aa13.35□□□□□ -0.27
CIRBP-201ENST00000320936 EIF5AL1Q6IS14 154 aaKnown RBP13.35□□□□□ -0.27
CIRBP-201ENST00000320936 SGK494Q96LW2 274 aa13.35□□□□□ -0.27
CIRBP-201ENST00000320936 NDFIP1Q9BT67 221 aa13.35□□□□□ -0.27
CIRBP-201ENST00000320936 TIMM8BQ9Y5J9 83 aaPredicted RBP13.35□□□□□ -0.27
CIRBP-201ENST00000320936 LENEPQ9Y5L5 61 aa13.35□□□□□ -0.27
CIRBP-201ENST00000320936 DYNC2H1Q8NCM8 4307 aaKnown RBP13.34□□□□□ -0.27
CIRBP-201ENST00000320936 DPPA3Q6W0C5 159 aa13.34□□□□□ -0.27
CIRBP-201ENST00000320936 CYB561D1Q8N8Q1 229 aa13.34□□□□□ -0.27
CIRBP-201ENST00000320936 LYSTQ99698 3801 aa13.34□□□□□ -0.27
CIRBP-201ENST00000320936 NOP10Q9NPE3 64 aaKnown RBP13.34□□□□□ -0.27
CIRBP-201ENST00000320936 EPDR1Q9UM22 224 aa13.34□□□□□ -0.27
CIRBP-201ENST00000320936 PLAC8L1A1L4L8 177 aa13.33□□□□□ -0.28
CIRBP-201ENST00000320936 F6UZH7 168 aa13.33□□□□□ -0.28
CIRBP-201ENST00000320936 ZNF324O75467 553 aaPredicted RBP13.33□□□□□ -0.28
CIRBP-201ENST00000320936 CST9LP1Q5W188 147 aa13.33□□□□□ -0.28
CIRBP-201ENST00000320936 EIF4E3Q8N5X7 224 aaKnown RBP13.33□□□□□ -0.28
CIRBP-201ENST00000320936 ATG101Q9BSB4 218 aa13.33□□□□□ -0.28
CIRBP-201ENST00000320936 TREM1Q9NP99 234 aa13.33□□□□□ -0.28
CIRBP-201ENST00000320936 FAM74A7A6NL05 159 aa13.32□□□□□ -0.28
CIRBP-201ENST00000320936 MUC21Q5SSG8 566 aa13.32□□□□□ -0.28
CIRBP-201ENST00000320936 Q6ZQT7 251 aa13.32□□□□□ -0.28
CIRBP-201ENST00000320936 SLC51BQ86UW2 128 aa13.32□□□□□ -0.28
CIRBP-201ENST00000320936 ZNF680Q8NEM1 530 aa13.32□□□□□ -0.28
CIRBP-201ENST00000320936 NKX6-2Q9C056 277 aaPredicted RBP13.32□□□□□ -0.28
CIRBP-201ENST00000320936 NAGKQ9UJ70 344 aa13.32□□□□□ -0.28
CIRBP-201ENST00000320936 IGHV1OR15-1A0A075B7D0 117 aa13.31□□□□□ -0.28
CIRBP-201ENST00000320936 H2AFB1P0C5Y9 115 aa13.31□□□□□ -0.28
CIRBP-201ENST00000320936 PRNTQ86SH4 94 aa13.31□□□□□ -0.28
CIRBP-201ENST00000320936 C9orf62Q8N4C0 152 aa13.31□□□□□ -0.28
CIRBP-201ENST00000320936 PSG8Q9UQ74 426 aa13.31□□□□□ -0.28
CIRBP-201ENST00000320936 IGHV4-4A0A075B6R2 117 aa13.3□□□□□ -0.28
CIRBP-201ENST00000320936 PEX7O00628 323 aa13.3□□□□□ -0.28
CIRBP-201ENST00000320936 LY6G6CO95867 125 aa13.3□□□□□ -0.28
CIRBP-201ENST00000320936 PPT1P50897 306 aa13.3□□□□□ -0.28
CIRBP-201ENST00000320936 FLI1Q01543 452 aaPredicted RBP13.3□□□□□ -0.28
CIRBP-201ENST00000320936 TMEM75Q8N9X5 138 aa13.3□□□□□ -0.28
CIRBP-201ENST00000320936 GSN-AS1Q9NRJ2 163 aa13.3□□□□□ -0.28
CIRBP-201ENST00000320936 ALMS1Q8TCU4 4167 aa13.29□□□□□ -0.28
CIRBP-201ENST00000320936 PLECQ15149 4684 aaKnown RBP13.29□□□□□ -0.28
CIRBP-201ENST00000320936 MBD3L1Q8WWY6 194 aa13.29□□□□□ -0.28
CIRBP-201ENST00000320936 LINC00476Q8WZB0 136 aa13.29□□□□□ -0.28
CIRBP-201ENST00000320936 LINC00467Q9BRT7 94 aa13.29□□□□□ -0.28
CIRBP-201ENST00000320936 TRAV34A0A0B4J273 112 aa13.28□□□□□ -0.28
CIRBP-201ENST00000320936 PAGE4O60829 102 aa13.28□□□□□ -0.28
CIRBP-201ENST00000320936 RAB5CP51148 216 aa13.28□□□□□ -0.28
CIRBP-201ENST00000320936 TCTAP57738 103 aa13.28□□□□□ -0.28
CIRBP-201ENST00000320936 ANXA2RQ3ZCQ2 193 aa13.28□□□□□ -0.28
CIRBP-201ENST00000320936 Q6AWC8 147 aa13.28□□□□□ -0.28
CIRBP-201ENST00000320936 FAM159AQ6UWV7 190 aa13.28□□□□□ -0.28
CIRBP-201ENST00000320936 TVP23CQ96ET8 276 aa13.28□□□□□ -0.28
CIRBP-201ENST00000320936 TP53TG3Q9ULZ0 132 aa13.28□□□□□ -0.28
CIRBP-201ENST00000320936 TRAV21A0A0B4J279 112 aa13.27□□□□□ -0.29
CIRBP-201ENST00000320936 GAGE12BA1L429 117 aa13.27□□□□□ -0.29
CIRBP-201ENST00000320936 FBLL1A6NHQ2 334 aaKnown RBP13.27□□□□□ -0.29
CIRBP-201ENST00000320936 GAGE7O76087 117 aa13.27□□□□□ -0.29
CIRBP-201ENST00000320936 GAGE12FP0CL80 117 aa13.27□□□□□ -0.29
CIRBP-201ENST00000320936 GAGE12GP0CL81 117 aa13.27□□□□□ -0.29
CIRBP-201ENST00000320936 GAGE12IP0CL82 117 aa13.27□□□□□ -0.29
CIRBP-201ENST00000320936 ZNF415Q09FC8 603 aa13.27□□□□□ -0.29
CIRBP-201ENST00000320936 HIST1H2BAQ96A08 127 aa13.27□□□□□ -0.29
CIRBP-201ENST00000320936 LINC00479Q96M42 142 aa13.27□□□□□ -0.29
CIRBP-201ENST00000320936 C8orf49Q96NF6 230 aa13.27□□□□□ -0.29
CIRBP-201ENST00000320936 NDUFAF3Q9BU61 184 aa13.27□□□□□ -0.29
CIRBP-201ENST00000320936 TEX46H3BTG2 121 aa13.26□□□□□ -0.29
CIRBP-201ENST00000320936 IGLV2-11P01706 119 aa13.26□□□□□ -0.29
CIRBP-201ENST00000320936 ATP5G1P05496 136 aa13.26□□□□□ -0.29
CIRBP-201ENST00000320936 ATP5G3P48201 142 aa13.26□□□□□ -0.29
CIRBP-201ENST00000320936 NKX2-5P52952 324 aaPredicted RBP13.26□□□□□ -0.29
CIRBP-201ENST00000320936 TMEM183BQ1AE95 376 aa13.26□□□□□ -0.29
CIRBP-201ENST00000320936 TMEM183AQ8IXX5 376 aa13.26□□□□□ -0.29
CIRBP-201ENST00000320936 ARL2-SNX15V9GYD0 113 aa13.26□□□□□ -0.29
CIRBP-201ENST00000320936 TRGV1A0A0A0MS02 117 aa13.25□□□□□ -0.29
CIRBP-201ENST00000320936 F5H768 121 aa13.25□□□□□ -0.29
CIRBP-201ENST00000320936 GCGP01275 180 aa13.25□□□□□ -0.29
CIRBP-201ENST00000320936 SULT1A2P50226 295 aa13.25□□□□□ -0.29
CIRBP-201ENST00000320936 UBE2G1P62253 170 aa13.25□□□□□ -0.29
CIRBP-201ENST00000320936 SMUG1Q53HV7 270 aa13.25□□□□□ -0.29
CIRBP-201ENST00000320936 SAPCD1Q5SSQ6 148 aa13.25□□□□□ -0.29
CIRBP-201ENST00000320936 Q86TA4 180 aa13.25□□□□□ -0.29
CIRBP-201ENST00000320936 C11orf72Q8NBR9 251 aa13.25□□□□□ -0.29
CIRBP-201ENST00000320936 TCEAL7Q9BRU2 100 aa13.25□□□□□ -0.29
CIRBP-201ENST00000320936 APLNQ9ULZ1 77 aa13.25□□□□□ -0.29
CIRBP-201ENST00000320936 KLF12Q9Y4X4 402 aa13.25□□□□□ -0.29
CIRBP-201ENST00000320936 TRGV11A0A075B6L2 103 aa13.24□□□□□ -0.29
CIRBP-201ENST00000320936 AKR1C3P42330 323 aa13.24□□□□□ -0.29
CIRBP-201ENST00000320936 TCL1AP56279 114 aa13.24□□□□□ -0.29
CIRBP-201ENST00000320936 DAZ2Q13117 558 aaKnown RBP13.24□□□□□ -0.29
CIRBP-201ENST00000320936 IBA57Q5T440 356 aaKnown RBP13.24□□□□□ -0.29
CIRBP-201ENST00000320936 TMEM88Q6PEY1 159 aa13.24□□□□□ -0.29
CIRBP-201ENST00000320936 Q6ZTI0 123 aa13.24□□□□□ -0.29
CIRBP-201ENST00000320936 GNG13Q9P2W3 67 aa13.24□□□□□ -0.29
CIRBP-201ENST00000320936 TRGV2A0A075B6R0 118 aa13.23□□□□□ -0.29
CIRBP-201ENST00000320936 FMC1Q96HJ9 113 aa13.22□□□□□ -0.29
CIRBP-201ENST00000320936 FAM210BQ96KR6 192 aa13.22□□□□□ -0.29
CIRBP-201ENST00000320936 SDF2L1Q9HCN8 221 aa13.22□□□□□ -0.29
CIRBP-201ENST00000320936 MANBALQ9NQG1 85 aa13.22□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 92.5 ms