RNA–Protein interactions for RNA: ENST00000316052.5

EXOSC4-201, Transcript of exosome component 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene EXOSC4, Length 887 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EXOSC4-201ENST00000316052 NPCDR1Q9BY65 106 aa11.95□□□□□ -0.5
EXOSC4-201ENST00000316052 PAX4O43316 350 aa11.94□□□□□ -0.5
EXOSC4-201ENST00000316052 FUSP35637 526 aaKnown RBP eCLIP11.94□□□□□ -0.5
EXOSC4-201ENST00000316052 NKX2-5P52952 324 aaPredicted RBP11.94□□□□□ -0.5
EXOSC4-201ENST00000316052 NHLH2Q02577 135 aa11.94□□□□□ -0.5
EXOSC4-201ENST00000316052 FAM122CQ6P4D5 195 aa11.94□□□□□ -0.5
EXOSC4-201ENST00000316052 MIR17HGQ75NE6 70 aa11.94□□□□□ -0.5
EXOSC4-201ENST00000316052 C9orf62Q8N4C0 152 aa11.94□□□□□ -0.5
EXOSC4-201ENST00000316052 TNFRSF18Q9Y5U5 241 aa11.94□□□□□ -0.5
EXOSC4-201ENST00000316052 SMLR1H3BR10 107 aa11.93□□□□□ -0.5
EXOSC4-201ENST00000316052 NXPH4O95158 308 aa11.93□□□□□ -0.5
EXOSC4-201ENST00000316052 SIX6O95475 246 aa11.93□□□□□ -0.5
EXOSC4-201ENST00000316052 NMBP08949 121 aa11.93□□□□□ -0.5
EXOSC4-201ENST00000316052 OR11H4Q8NGC9 324 aa11.93□□□□□ -0.5
EXOSC4-201ENST00000316052 THAP6Q8TBB0 222 aa11.93□□□□□ -0.5
EXOSC4-201ENST00000316052 AAMDCQ9H7C9 122 aa11.93□□□□□ -0.5
EXOSC4-201ENST00000316052 MRPL16Q9NX20 251 aaKnown RBP11.93□□□□□ -0.5
EXOSC4-201ENST00000316052 ZNF492Q9P255 531 aa11.93□□□□□ -0.5
EXOSC4-201ENST00000316052 IGHV1OR15-1A0A075B7D0 117 aa11.92□□□□□ -0.5
EXOSC4-201ENST00000316052 RGS13O14921 159 aa11.92□□□□□ -0.5
EXOSC4-201ENST00000316052 NBEAP1P0C6P0 100 aa11.92□□□□□ -0.5
EXOSC4-201ENST00000316052 IBA57Q5T440 356 aaKnown RBP11.92□□□□□ -0.5
EXOSC4-201ENST00000316052 TMEM78Q5T7P6 136 aa11.92□□□□□ -0.5
EXOSC4-201ENST00000316052 ICOSQ9Y6W8 199 aa11.92□□□□□ -0.5
EXOSC4-201ENST00000316052 CRYBA4P53673 196 aa11.91□□□□□ -0.5
EXOSC4-201ENST00000316052 FHL2Q14192 279 aa11.91□□□□□ -0.5
EXOSC4-201ENST00000316052 Q5BKY6 102 aa11.91□□□□□ -0.5
EXOSC4-201ENST00000316052 LYPD5Q6UWN5 251 aa11.91□□□□□ -0.5
EXOSC4-201ENST00000316052 FXYD5Q96DB9 178 aa11.91□□□□□ -0.5
EXOSC4-201ENST00000316052 C8orf49Q96NF6 230 aa11.91□□□□□ -0.5
EXOSC4-201ENST00000316052 PRO0255Q9UI72 69 aa11.91□□□□□ -0.5
EXOSC4-201ENST00000316052 HHLA3Q9XRX5 114 aa11.91□□□□□ -0.5
EXOSC4-201ENST00000316052 VPS13BQ7Z7G8 4022 aa11.91□□□□□ -0.5
EXOSC4-201ENST00000316052 PET100P0DJ07 73 aa11.9□□□□□ -0.5
EXOSC4-201ENST00000316052 OR5C1Q8NGR4 320 aa11.9□□□□□ -0.5
EXOSC4-201ENST00000316052 Q8TAT8 98 aa11.9□□□□□ -0.5
EXOSC4-201ENST00000316052 PPP1R1CQ8WVI7 109 aa11.9□□□□□ -0.5
EXOSC4-201ENST00000316052 OR51M1Q9H341 326 aa11.9□□□□□ -0.5
EXOSC4-201ENST00000316052 HSPB11Q9Y547 144 aa11.9□□□□□ -0.5
EXOSC4-201ENST00000316052 OR10J4P0C629 311 aa11.89□□□□□ -0.51
EXOSC4-201ENST00000316052 ZNF138P52744 262 aa11.89□□□□□ -0.51
EXOSC4-201ENST00000316052 LGALSLQ3ZCW2 172 aaPredicted RBP11.89□□□□□ -0.51
EXOSC4-201ENST00000316052 PHYHIPLQ96FC7 376 aa11.89□□□□□ -0.51
EXOSC4-201ENST00000316052 PAXXQ9BUH6 204 aa11.89□□□□□ -0.51
EXOSC4-201ENST00000316052 PGPEP1Q9NXJ5 209 aa11.89□□□□□ -0.51
EXOSC4-201ENST00000316052 MPC2O95563 127 aa11.88□□□□□ -0.51
EXOSC4-201ENST00000316052 ZNF345Q14585 488 aa11.88□□□□□ -0.51
EXOSC4-201ENST00000316052 ARPC5LQ9BPX5 153 aa11.88□□□□□ -0.51
EXOSC4-201ENST00000316052 OR5AC2Q9NZP5 309 aa11.88□□□□□ -0.51
EXOSC4-201ENST00000316052 MDFICQ9P1T7 246 aa11.88□□□□□ -0.51
EXOSC4-201ENST00000316052 H0YIZ8 118 aa11.87□□□□□ -0.51
EXOSC4-201ENST00000316052 IFITM2Q01629 132 aa11.87□□□□□ -0.51
EXOSC4-201ENST00000316052 SLAQ13239 276 aa11.87□□□□□ -0.51
EXOSC4-201ENST00000316052 MRPL23Q16540 153 aaKnown RBP11.87□□□□□ -0.51
EXOSC4-201ENST00000316052 MUC21Q5SSG8 566 aa11.87□□□□□ -0.51
EXOSC4-201ENST00000316052 MRPL32Q9BYC8 188 aaKnown RBP11.87□□□□□ -0.51
EXOSC4-201ENST00000316052 A0A0D9SG52 128 aa11.86□□□□□ -0.51
EXOSC4-201ENST00000316052 TRBV7-9A0A0J9YWB2 115 aa11.86□□□□□ -0.51
EXOSC4-201ENST00000316052 E5RGE8 158 aa11.86□□□□□ -0.51
EXOSC4-201ENST00000316052 SFTA3P0C7M3 94 aa11.86□□□□□ -0.51
EXOSC4-201ENST00000316052 XGP55808 180 aa11.86□□□□□ -0.51
EXOSC4-201ENST00000316052 RANP62826 216 aaKnown RBP11.86□□□□□ -0.51
EXOSC4-201ENST00000316052 ZNF415Q09FC8 603 aa11.86□□□□□ -0.51
EXOSC4-201ENST00000316052 ZNF266Q14584 549 aa11.86□□□□□ -0.51
EXOSC4-201ENST00000316052 WDR61Q9GZS3 305 aaKnown RBP11.86□□□□□ -0.51
EXOSC4-201ENST00000316052 SLC25A31Q9H0C2 315 aa11.86□□□□□ -0.51
EXOSC4-201ENST00000316052 TNFSF18Q9UNG2 199 aa11.86□□□□□ -0.51
EXOSC4-201ENST00000316052 SRRM2Q9UQ35 2752 aaKnown RBP11.86□□□□□ -0.51
EXOSC4-201ENST00000316052 DMBT1Q9UGM3 2413 aaPredicted RBP11.86□□□□□ -0.51
EXOSC4-201ENST00000316052 FXYD6-FXYD2A0A087WZ82 144 aa11.85□□□□□ -0.51
EXOSC4-201ENST00000316052 DNAH10OSP0CZ25 163 aa11.85□□□□□ -0.51
EXOSC4-201ENST00000316052 ERVFC1-1P60608 527 aa11.85□□□□□ -0.51
EXOSC4-201ENST00000316052 LRRC37A5PQ49AS3 106 aa11.85□□□□□ -0.51
EXOSC4-201ENST00000316052 NEGR1Q7Z3B1 354 aa11.85□□□□□ -0.51
EXOSC4-201ENST00000316052 ZNF479Q96JC4 524 aa11.85□□□□□ -0.51
EXOSC4-201ENST00000316052 BOLA1Q9Y3E2 137 aa11.85□□□□□ -0.51
EXOSC4-201ENST00000316052 TRGV4A0A0C4DH28 118 aa11.84□□□□□ -0.51
EXOSC4-201ENST00000316052 K7EQD1 137 aa11.84□□□□□ -0.51
EXOSC4-201ENST00000316052 ARPC5O15511 151 aa11.84□□□□□ -0.51
EXOSC4-201ENST00000316052 IQCF2Q8IXL9 164 aa11.84□□□□□ -0.51
EXOSC4-201ENST00000316052 KCNRGQ8N5I3 272 aa11.84□□□□□ -0.51
EXOSC4-201ENST00000316052 MYCBP2O75592 4640 aa11.84□□□□□ -0.51
EXOSC4-201ENST00000316052 A0A087WTM6 91 aa11.83□□□□□ -0.52
EXOSC4-201ENST00000316052 RBAKDNA6NC62 111 aa11.83□□□□□ -0.52
EXOSC4-201ENST00000316052 EPM2AB3EWF7 344 aa11.83□□□□□ -0.52
EXOSC4-201ENST00000316052 EREGO14944 169 aa11.83□□□□□ -0.52
EXOSC4-201ENST00000316052 OR7C2O60412 319 aa11.83□□□□□ -0.52
EXOSC4-201ENST00000316052 CSN1S1P47710 185 aa11.83□□□□□ -0.52
EXOSC4-201ENST00000316052 TMEM183BQ1AE95 376 aa11.83□□□□□ -0.52
EXOSC4-201ENST00000316052 Q6AWC8 147 aa11.83□□□□□ -0.52
EXOSC4-201ENST00000316052 WFDC10BQ8IUB3 73 aa11.83□□□□□ -0.52
EXOSC4-201ENST00000316052 TMEM183AQ8IXX5 376 aa11.83□□□□□ -0.52
EXOSC4-201ENST00000316052 LYPD1Q8N2G4 141 aa11.83□□□□□ -0.52
EXOSC4-201ENST00000316052 INO80EQ8NBZ0 244 aaPredicted RBP11.83□□□□□ -0.52
EXOSC4-201ENST00000316052 RASL10AQ92737 203 aa11.83□□□□□ -0.52
EXOSC4-201ENST00000316052 MBD2Q9UBB5 411 aa11.83□□□□□ -0.52
EXOSC4-201ENST00000316052 DIRC3C9JPN6 131 aa11.82□□□□□ -0.52
EXOSC4-201ENST00000316052 GYPEP15421 78 aa11.82□□□□□ -0.52
EXOSC4-201ENST00000316052 KRTAP10-1P60331 282 aa11.82□□□□□ -0.52
EXOSC4-201ENST00000316052 CDPF1Q6NVV7 123 aa11.82□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 202.4 ms