RNA–Protein interactions for RNA: ENST00000309422.6

VEGFB-201, Transcript of vascular endothelial growth factor B, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene VEGFB, Length 1,380 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFB-201ENST00000309422 H2AFB1P0C5Y9 115 aa14.19□□□□□ -0.14
VEGFB-201ENST00000309422 HTN3P15516 51 aa14.19□□□□□ -0.14
VEGFB-201ENST00000309422 CD300CQ08708 224 aa14.19□□□□□ -0.14
VEGFB-201ENST00000309422 ZFAND2AQ8N6M9 145 aa14.19□□□□□ -0.14
VEGFB-201ENST00000309422 RNASE8Q8TDE3 154 aaKnown RBP14.19□□□□□ -0.14
VEGFB-201ENST00000309422 TCEAL7Q9BRU2 100 aa14.19□□□□□ -0.14
VEGFB-201ENST00000309422 TREM1Q9NP99 234 aa14.19□□□□□ -0.14
VEGFB-201ENST00000309422 EPDR1Q9UM22 224 aa14.19□□□□□ -0.14
VEGFB-201ENST00000309422 LCE6AA0A183 80 aa14.18□□□□□ -0.14
VEGFB-201ENST00000309422 DEFB130BP0DP73 79 aa14.18□□□□□ -0.14
VEGFB-201ENST00000309422 DEFB130AP0DP74 79 aa14.18□□□□□ -0.14
VEGFB-201ENST00000309422 LGALSLQ3ZCW2 172 aaPredicted RBP14.18□□□□□ -0.14
VEGFB-201ENST00000309422 CST9LP1Q5W188 147 aa14.18□□□□□ -0.14
VEGFB-201ENST00000309422 FAM159AQ6UWV7 190 aa14.18□□□□□ -0.14
VEGFB-201ENST00000309422 HIST1H2BAQ96A08 127 aa14.18□□□□□ -0.14
VEGFB-201ENST00000309422 ARL2-SNX15V9GYD0 113 aa14.18□□□□□ -0.14
VEGFB-201ENST00000309422 IGHV1OR15-1A0A075B7D0 117 aa14.17□□□□□ -0.14
VEGFB-201ENST00000309422 AZU1P20160 251 aa14.17□□□□□ -0.14
VEGFB-201ENST00000309422 FHITP49789 147 aa14.17□□□□□ -0.14
VEGFB-201ENST00000309422 TMEM75Q8N9X5 138 aa14.17□□□□□ -0.14
VEGFB-201ENST00000309422 LINC00467Q9BRT7 94 aa14.17□□□□□ -0.14
VEGFB-201ENST00000309422 TMPRSS5Q9H3S3 457 aa14.17□□□□□ -0.14
VEGFB-201ENST00000309422 NOP10Q9NPE3 64 aaKnown RBP14.17□□□□□ -0.14
VEGFB-201ENST00000309422 STARD9Q9P2P6 4700 aa14.17□□□□□ -0.14
VEGFB-201ENST00000309422 TRAV21A0A0B4J279 112 aa14.16□□□□□ -0.14
VEGFB-201ENST00000309422 PRM2P04554 102 aa14.16□□□□□ -0.14
VEGFB-201ENST00000309422 FLI1Q01543 452 aaPredicted RBP14.16□□□□□ -0.14
VEGFB-201ENST00000309422 NAGKQ9UJ70 344 aa14.16□□□□□ -0.14
VEGFB-201ENST00000309422 TRAV8-1A0A0A6YYK1 113 aa14.15□□□□□ -0.14
VEGFB-201ENST00000309422 A0A1B0GV50 99 aa14.15□□□□□ -0.14
VEGFB-201ENST00000309422 FAM74A7A6NL05 159 aa14.15□□□□□ -0.14
VEGFB-201ENST00000309422 PEX7O00628 323 aa14.15□□□□□ -0.14
VEGFB-201ENST00000309422 UBE2G1P62253 170 aa14.15□□□□□ -0.14
VEGFB-201ENST00000309422 ZNF415Q09FC8 603 aa14.15□□□□□ -0.14
VEGFB-201ENST00000309422 ANXA2RQ3ZCQ2 193 aa14.15□□□□□ -0.14
VEGFB-201ENST00000309422 SAPCD1Q5SSQ6 148 aa14.15□□□□□ -0.14
VEGFB-201ENST00000309422 NDUFAF3Q9BU61 184 aa14.15□□□□□ -0.14
VEGFB-201ENST00000309422 PSG8Q9UQ74 426 aa14.15□□□□□ -0.14
VEGFB-201ENST00000309422 TRGV11A0A075B6L2 103 aa14.14□□□□□ -0.15
VEGFB-201ENST00000309422 ZNF324O75467 553 aaPredicted RBP14.14□□□□□ -0.15
VEGFB-201ENST00000309422 PRNTQ86SH4 94 aa14.14□□□□□ -0.15
VEGFB-201ENST00000309422 MBD3L1Q8WWY6 194 aa14.14□□□□□ -0.15
VEGFB-201ENST00000309422 FAM210BQ96KR6 192 aa14.14□□□□□ -0.15
VEGFB-201ENST00000309422 IGHV4-4A0A075B6R2 117 aa14.13□□□□□ -0.15
VEGFB-201ENST00000309422 LY6G6CO95867 125 aa14.13□□□□□ -0.15
VEGFB-201ENST00000309422 ATP5G1P05496 136 aa14.13□□□□□ -0.15
VEGFB-201ENST00000309422 ATP5G3P48201 142 aa14.13□□□□□ -0.15
VEGFB-201ENST00000309422 SMUG1Q53HV7 270 aa14.13□□□□□ -0.15
VEGFB-201ENST00000309422 IBA57Q5T440 356 aaKnown RBP14.13□□□□□ -0.15
VEGFB-201ENST00000309422 PRR9Q5T870 116 aa14.13□□□□□ -0.15
VEGFB-201ENST00000309422 Q6AWC8 147 aa14.13□□□□□ -0.15
VEGFB-201ENST00000309422 SGK494Q96LW2 274 aa14.13□□□□□ -0.15
VEGFB-201ENST00000309422 IFNA1P01562 189 aa14.12□□□□□ -0.15
VEGFB-201ENST00000309422 MUC21Q5SSG8 566 aa14.12□□□□□ -0.15
VEGFB-201ENST00000309422 KCNS1Q96KK3 526 aa14.12□□□□□ -0.15
VEGFB-201ENST00000309422 MANBALQ9NQG1 85 aa14.12□□□□□ -0.15
VEGFB-201ENST00000309422 AKR1C3P42330 323 aa14.11□□□□□ -0.15
VEGFB-201ENST00000309422 C9orf62Q8N4C0 152 aa14.11□□□□□ -0.15
VEGFB-201ENST00000309422 LINC00476Q8WZB0 136 aa14.11□□□□□ -0.15
VEGFB-201ENST00000309422 GSN-AS1Q9NRJ2 163 aa14.11□□□□□ -0.15
VEGFB-201ENST00000309422 CSMD3Q7Z407 3707 aa14.11□□□□□ -0.15
VEGFB-201ENST00000309422 TRGV2A0A075B6R0 118 aa14.1□□□□□ -0.15
VEGFB-201ENST00000309422 PLAC8L1A1L4L8 177 aa14.1□□□□□ -0.15
VEGFB-201ENST00000309422 PAGE4O60829 102 aa14.1□□□□□ -0.15
VEGFB-201ENST00000309422 SULT1A2P50226 295 aa14.1□□□□□ -0.15
VEGFB-201ENST00000309422 DAZ2Q13117 558 aaKnown RBP14.1□□□□□ -0.15
VEGFB-201ENST00000309422 FMC1Q96HJ9 113 aa14.1□□□□□ -0.15
VEGFB-201ENST00000309422 SDF2L1Q9HCN8 221 aa14.1□□□□□ -0.15
VEGFB-201ENST00000309422 TRGV1A0A0A0MS02 117 aa14.09□□□□□ -0.15
VEGFB-201ENST00000309422 GAGE12BA1L429 117 aa14.09□□□□□ -0.15
VEGFB-201ENST00000309422 F5H768 121 aa14.09□□□□□ -0.15
VEGFB-201ENST00000309422 GAGE7O76087 117 aa14.09□□□□□ -0.15
VEGFB-201ENST00000309422 GCGP01275 180 aa14.09□□□□□ -0.15
VEGFB-201ENST00000309422 GAGE12FP0CL80 117 aa14.09□□□□□ -0.15
VEGFB-201ENST00000309422 GAGE12GP0CL81 117 aa14.09□□□□□ -0.15
VEGFB-201ENST00000309422 GAGE12IP0CL82 117 aa14.09□□□□□ -0.15
VEGFB-201ENST00000309422 TCL1AP56279 114 aa14.09□□□□□ -0.15
VEGFB-201ENST00000309422 PLA2G2EQ9NZK7 142 aa14.09□□□□□ -0.15
VEGFB-201ENST00000309422 DYNC2H1Q8NCM8 4307 aaKnown RBP14.09□□□□□ -0.15
VEGFB-201ENST00000309422 TMEM183BQ1AE95 376 aa14.09□□□□□ -0.15
VEGFB-201ENST00000309422 TMEM183AQ8IXX5 376 aa14.09□□□□□ -0.15
VEGFB-201ENST00000309422 GNG13Q9P2W3 67 aa14.09□□□□□ -0.15
VEGFB-201ENST00000309422 KMT2CQ8NEZ4 4911 aaKnown RBP14.08□□□□□ -0.16
VEGFB-201ENST00000309422 A0A1B0GVG6 124 aa14.08□□□□□ -0.16
VEGFB-201ENST00000309422 S100A9P06702 114 aaKnown RBP14.08□□□□□ -0.16
VEGFB-201ENST00000309422 PFN1P07737 140 aaKnown RBP14.08□□□□□ -0.16
VEGFB-201ENST00000309422 Q86TA4 180 aa14.08□□□□□ -0.16
VEGFB-201ENST00000309422 ALMS1Q8TCU4 4167 aa14.07□□□□□ -0.16
VEGFB-201ENST00000309422 TRAV34A0A0B4J273 112 aa14.07□□□□□ -0.16
VEGFB-201ENST00000309422 LGALS9CQ6DKI2 356 aa14.07□□□□□ -0.16
VEGFB-201ENST00000309422 C15orf53Q8NAA6 179 aa14.07□□□□□ -0.16
VEGFB-201ENST00000309422 ZFP30Q9Y2G7 519 aa14.07□□□□□ -0.16
VEGFB-201ENST00000309422 LGALS9BQ3B8N2 356 aa14.06□□□□□ -0.16
VEGFB-201ENST00000309422 C11orf72Q8NBR9 251 aa14.06□□□□□ -0.16
VEGFB-201ENST00000309422 C8orf49Q96NF6 230 aa14.06□□□□□ -0.16
VEGFB-201ENST00000309422 TXNDC17Q9BRA2 123 aa14.06□□□□□ -0.16
VEGFB-201ENST00000309422 SPXQ9BT56 116 aa14.06□□□□□ -0.16
VEGFB-201ENST00000309422 TRAV1-1A0A0B4J248 108 aa14.05□□□□□ -0.16
VEGFB-201ENST00000309422 P0DMU3 169 aa14.05□□□□□ -0.16
VEGFB-201ENST00000309422 FAM231AP0DMU4 169 aa14.05□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 307.4 ms