RNA–Protein interactions for RNA: ENST00000304494.9

CDKN2A-201, Transcript of cyclin dependent kinase inhibitor 2A, humanhuman

TSL 1 (best) BASIC

Gene CDKN2A, Length 1,218 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKN2A-201ENST00000304494 STAG3L3P0CL85 134 aa18.5■□□□□ 0.55
CDKN2A-201ENST00000304494 ARL14EPLP0DKL9 152 aa18.5■□□□□ 0.55
CDKN2A-201ENST00000304494 TCL1AP56279 114 aa18.5■□□□□ 0.55
CDKN2A-201ENST00000304494 GNPNAT1Q96EK6 184 aaPredicted RBP18.5■□□□□ 0.55
CDKN2A-201ENST00000304494 C18orf15Q96N68 181 aa18.5■□□□□ 0.55
CDKN2A-201ENST00000304494 RPH3ALQ9UNE2 315 aa18.5■□□□□ 0.55
CDKN2A-201ENST00000304494 TNFSF18Q9UNG2 199 aa18.5■□□□□ 0.55
CDKN2A-201ENST00000304494 HECTD4Q9Y4D8 3996 aa18.5■□□□□ 0.55
CDKN2A-201ENST00000304494 TRAV26-1A0A087WT03 109 aa18.49■□□□□ 0.55
CDKN2A-201ENST00000304494 TRGV1A0A0A0MS02 117 aa18.49■□□□□ 0.55
CDKN2A-201ENST00000304494 BORCS7-ASMTA0A0B4J1R7 106 aa18.49■□□□□ 0.55
CDKN2A-201ENST00000304494 CCL18P55774 89 aa18.49■□□□□ 0.55
CDKN2A-201ENST00000304494 RAB24Q969Q5 203 aa18.49■□□□□ 0.55
CDKN2A-201ENST00000304494 TMPRSS5Q9H3S3 457 aa18.49■□□□□ 0.55
CDKN2A-201ENST00000304494 DNAH2Q9P225 4427 aa18.48■□□□□ 0.55
CDKN2A-201ENST00000304494 RNF222A6NCQ9 220 aa18.48■□□□□ 0.55
CDKN2A-201ENST00000304494 HOXA5P20719 270 aa18.48■□□□□ 0.55
CDKN2A-201ENST00000304494 TP53TG3Q9ULZ0 132 aa18.48■□□□□ 0.55
CDKN2A-201ENST00000304494 KLF12Q9Y4X4 402 aa18.48■□□□□ 0.55
CDKN2A-201ENST00000304494 H3BNG1 76 aa18.47■□□□□ 0.55
CDKN2A-201ENST00000304494 SPINK4O60575 86 aa18.47■□□□□ 0.55
CDKN2A-201ENST00000304494 Q6AWC8 147 aa18.47■□□□□ 0.55
CDKN2A-201ENST00000304494 Q6ZQT7 251 aa18.47■□□□□ 0.55
CDKN2A-201ENST00000304494 GOLT1AQ6ZVE7 132 aa18.47■□□□□ 0.55
CDKN2A-201ENST00000304494 SH3BGRL3Q9H299 93 aa18.47■□□□□ 0.55
CDKN2A-201ENST00000304494 ZNF415Q09FC8 603 aa18.46■□□□□ 0.55
CDKN2A-201ENST00000304494 RPL7L1Q6DKI1 246 aaKnown RBP18.46■□□□□ 0.55
CDKN2A-201ENST00000304494 Q6ZR54 194 aa18.46■□□□□ 0.55
CDKN2A-201ENST00000304494 ST6GAL2Q96JF0 529 aa18.46■□□□□ 0.55
CDKN2A-201ENST00000304494 ACTR3CQ9C0K3 210 aaPredicted RBP18.46■□□□□ 0.55
CDKN2A-201ENST00000304494 A0A0J9YY99 117 aa18.45■□□□□ 0.54
CDKN2A-201ENST00000304494 SUN5Q8TC36 379 aa18.45■□□□□ 0.54
CDKN2A-201ENST00000304494 SERTM2A0A1B0GWG4 89 aa18.44■□□□□ 0.54
CDKN2A-201ENST00000304494 CXorf1O96002 111 aa18.44■□□□□ 0.54
CDKN2A-201ENST00000304494 GCHFRP30047 84 aa18.44■□□□□ 0.54
CDKN2A-201ENST00000304494 MUC21Q5SSG8 566 aa18.44■□□□□ 0.54
CDKN2A-201ENST00000304494 TMEM167BQ9NRX6 74 aa18.44■□□□□ 0.54
CDKN2A-201ENST00000304494 SOHLH1Q5JUK2 328 aa18.43■□□□□ 0.54
CDKN2A-201ENST00000304494 FAM159AQ6UWV7 190 aa18.43■□□□□ 0.54
CDKN2A-201ENST00000304494 C5orf17Q8NAS9 161 aa18.42■□□□□ 0.54
CDKN2A-201ENST00000304494 ZNRF2Q8NHG8 242 aa18.42■□□□□ 0.54
CDKN2A-201ENST00000304494 LINC00588Q9Y4M8 146 aa18.42■□□□□ 0.54
CDKN2A-201ENST00000304494 FAT2Q9NYQ8 4349 aa18.41■□□□□ 0.54
CDKN2A-201ENST00000304494 K7EQM0 130 aa18.41■□□□□ 0.54
CDKN2A-201ENST00000304494 TAAR5O14804 337 aa18.41■□□□□ 0.54
CDKN2A-201ENST00000304494 RTL8CO15255 209 aa18.41■□□□□ 0.54
CDKN2A-201ENST00000304494 GNG5P63218 68 aa18.41■□□□□ 0.54
CDKN2A-201ENST00000304494 SSX7Q7RTT5 188 aa18.41■□□□□ 0.54
CDKN2A-201ENST00000304494 TREM1Q9NP99 234 aa18.41■□□□□ 0.54
CDKN2A-201ENST00000304494 MRPL16Q9NX20 251 aaKnown RBP18.41■□□□□ 0.54
CDKN2A-201ENST00000304494 NACAE9PAV3 2078 aa18.41■□□□□ 0.54
CDKN2A-201ENST00000304494 TRGV11A0A075B6L2 103 aa18.4■□□□□ 0.54
CDKN2A-201ENST00000304494 G3V3Q6 166 aa18.4■□□□□ 0.54
CDKN2A-201ENST00000304494 NDFIP1Q9BT67 221 aa18.4■□□□□ 0.54
CDKN2A-201ENST00000304494 TRAV8-1A0A0A6YYK1 113 aa18.39■□□□□ 0.53
CDKN2A-201ENST00000304494 TRAV21A0A0B4J279 112 aa18.39■□□□□ 0.53
CDKN2A-201ENST00000304494 PRSS29PA6NIE9 313 aa18.39■□□□□ 0.53
CDKN2A-201ENST00000304494 ARPC5O15511 151 aa18.38■□□□□ 0.53
CDKN2A-201ENST00000304494 TCRAP04437 139 aa18.38■□□□□ 0.53
CDKN2A-201ENST00000304494 TMEM183BQ1AE95 376 aa18.38■□□□□ 0.53
CDKN2A-201ENST00000304494 TDRG1Q3Y452 100 aa18.38■□□□□ 0.53
CDKN2A-201ENST00000304494 TMEM183AQ8IXX5 376 aa18.38■□□□□ 0.53
CDKN2A-201ENST00000304494 MDFICQ9P1T7 246 aa18.38■□□□□ 0.53
CDKN2A-201ENST00000304494 NAGKQ9UJ70 344 aa18.38■□□□□ 0.53
CDKN2A-201ENST00000304494 DNAH17Q9UFH2 4485 aa18.37■□□□□ 0.53
CDKN2A-201ENST00000304494 C1orf134Q5TEV5 83 aa18.37■□□□□ 0.53
CDKN2A-201ENST00000304494 IQCF2Q8IXL9 164 aa18.37■□□□□ 0.53
CDKN2A-201ENST00000304494 TVP23CQ96ET8 276 aa18.37■□□□□ 0.53
CDKN2A-201ENST00000304494 SPXQ9BT56 116 aa18.37■□□□□ 0.53
CDKN2A-201ENST00000304494 NBDYA0A0U1RRE5 68 aa18.36■□□□□ 0.53
CDKN2A-201ENST00000304494 CTXND1A0A1B0GTU2 59 aa18.36■□□□□ 0.53
CDKN2A-201ENST00000304494 F6UZH7 168 aa18.36■□□□□ 0.53
CDKN2A-201ENST00000304494 SUMO1P63165 101 aaKnown RBP18.36■□□□□ 0.53
CDKN2A-201ENST00000304494 SLAQ13239 276 aa18.36■□□□□ 0.53
CDKN2A-201ENST00000304494 AKR1C8PQ5T2L2 129 aa18.36■□□□□ 0.53
CDKN2A-201ENST00000304494 VSIG2Q96IQ7 327 aa18.36■□□□□ 0.53
CDKN2A-201ENST00000304494 GGTLC3B5MD39 225 aa18.35■□□□□ 0.53
CDKN2A-201ENST00000304494 EPDR1Q9UM22 224 aa18.35■□□□□ 0.53
CDKN2A-201ENST00000304494 A0A1W2PRE2 83 aa18.34■□□□□ 0.53
CDKN2A-201ENST00000304494 IGHV3-53P01767 116 aa18.34■□□□□ 0.53
CDKN2A-201ENST00000304494 KCNS1Q96KK3 526 aa18.34■□□□□ 0.53
CDKN2A-201ENST00000304494 SGK494Q96LW2 274 aa18.34■□□□□ 0.53
CDKN2A-201ENST00000304494 PRO0255Q9UI72 69 aa18.34■□□□□ 0.53
CDKN2A-201ENST00000304494 FBLL1A6NHQ2 334 aaKnown RBP18.33■□□□□ 0.52
CDKN2A-201ENST00000304494 PAX4O43316 350 aa18.33■□□□□ 0.52
CDKN2A-201ENST00000304494 ZNF726P1Q15940 193 aa18.33■□□□□ 0.52
CDKN2A-201ENST00000304494 ESRGQ1W209 222 aa18.33■□□□□ 0.52
CDKN2A-201ENST00000304494 CYB561D1Q8N8Q1 229 aa18.33■□□□□ 0.52
CDKN2A-201ENST00000304494 RASL10AQ92737 203 aa18.33■□□□□ 0.52
CDKN2A-201ENST00000304494 SDF2L1Q9HCN8 221 aa18.33■□□□□ 0.52
CDKN2A-201ENST00000304494 A0A096LPF7 62 aa18.32■□□□□ 0.52
CDKN2A-201ENST00000304494 A0A1B0GVY2 172 aa18.32■□□□□ 0.52
CDKN2A-201ENST00000304494 TMEM75Q8N9X5 138 aa18.32■□□□□ 0.52
CDKN2A-201ENST00000304494 UPK3BQ9BT76 320 aa18.32■□□□□ 0.52
CDKN2A-201ENST00000304494 Q9H8V8 135 aa18.32■□□□□ 0.52
CDKN2A-201ENST00000304494 CYTL1Q9NRR1 136 aa18.32■□□□□ 0.52
CDKN2A-201ENST00000304494 PSG8Q9UQ74 426 aa18.32■□□□□ 0.52
CDKN2A-201ENST00000304494 ZFP69Q49AA0 526 aa18.31■□□□□ 0.52
CDKN2A-201ENST00000304494 HHLA3Q9XRX5 114 aa18.31■□□□□ 0.52
CDKN2A-201ENST00000304494 MRPS16Q9Y3D3 137 aaKnown RBP18.31■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 108.7 ms