RNA–Protein interactions for RNA: ENST00000301935.9

UBXN1-202, Transcript of UBX domain protein 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene UBXN1, Length 1,153 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBXN1-202ENST00000301935 DERL1Q9BUN8 251 aa11.11□□□□□ -0.63
UBXN1-202ENST00000301935 ALMS1Q8TCU4 4167 aa11.1□□□□□ -0.63
UBXN1-202ENST00000301935 TRAV8-1A0A0A6YYK1 113 aa11.1□□□□□ -0.63
UBXN1-202ENST00000301935 F8W036 122 aa11.1□□□□□ -0.63
UBXN1-202ENST00000301935 CT45A10P0DMU9 189 aa11.1□□□□□ -0.63
UBXN1-202ENST00000301935 CRISP2P16562 243 aa11.1□□□□□ -0.63
UBXN1-202ENST00000301935 CENPWQ5EE01 88 aa11.1□□□□□ -0.63
UBXN1-202ENST00000301935 GDF5OSQ5U4N7 250 aa11.1□□□□□ -0.63
UBXN1-202ENST00000301935 MORN3Q6PF18 240 aaPredicted RBP11.1□□□□□ -0.63
UBXN1-202ENST00000301935 TRPT1Q86TN4 253 aaKnown RBP11.1□□□□□ -0.63
UBXN1-202ENST00000301935 TMEM183AQ8IXX5 376 aa11.1□□□□□ -0.63
UBXN1-202ENST00000301935 FAM19A4Q96LR4 140 aa11.1□□□□□ -0.63
UBXN1-202ENST00000301935 IGF2BP2-AS1Q96M15 143 aa11.1□□□□□ -0.63
UBXN1-202ENST00000301935 NAT8Q9UHE5 227 aa11.1□□□□□ -0.63
UBXN1-202ENST00000301935 ZNF705DP0CH99 300 aaPredicted RBP11.09□□□□□ -0.63
UBXN1-202ENST00000301935 ZNF705BP0CI00 300 aaPredicted RBP11.09□□□□□ -0.63
UBXN1-202ENST00000301935 PNRC1Q12796 327 aaPredicted RBP11.09□□□□□ -0.63
UBXN1-202ENST00000301935 SMUG1Q53HV7 270 aa11.09□□□□□ -0.63
UBXN1-202ENST00000301935 C10orf91Q5T1B1 145 aa11.09□□□□□ -0.63
UBXN1-202ENST00000301935 DEFB125Q8N687 156 aa11.09□□□□□ -0.63
UBXN1-202ENST00000301935 MLST8Q9BVC4 326 aa11.09□□□□□ -0.63
UBXN1-202ENST00000301935 TUBA4BQ9H853 241 aa11.09□□□□□ -0.63
UBXN1-202ENST00000301935 CDKN1BP46527 198 aa11.08□□□□□ -0.64
UBXN1-202ENST00000301935 DEFB1P60022 68 aa11.08□□□□□ -0.64
UBXN1-202ENST00000301935 SGK494Q96LW2 274 aa11.08□□□□□ -0.64
UBXN1-202ENST00000301935 C1QTNF4Q9BXJ3 329 aa11.08□□□□□ -0.64
UBXN1-202ENST00000301935 SRD5A3Q9H8P0 318 aa11.08□□□□□ -0.64
UBXN1-202ENST00000301935 KIR2DL5BA0A0G2JN68 375 aa11.07□□□□□ -0.64
UBXN1-202ENST00000301935 KIR2DL5BA0A0G2JPC4 375 aa11.07□□□□□ -0.64
UBXN1-202ENST00000301935 GPX1P07203 203 aa11.07□□□□□ -0.64
UBXN1-202ENST00000301935 ZNF124Q15973 351 aa11.07□□□□□ -0.64
UBXN1-202ENST00000301935 AMTNQ6UX39 209 aa11.07□□□□□ -0.64
UBXN1-202ENST00000301935 KIR2DL5AQ8N109 375 aa11.07□□□□□ -0.64
UBXN1-202ENST00000301935 KIR2DL5BQ8NHK3 375 aa11.07□□□□□ -0.64
UBXN1-202ENST00000301935 TVP23CQ96ET8 276 aa11.07□□□□□ -0.64
UBXN1-202ENST00000301935 SDF2L1Q9HCN8 221 aa11.07□□□□□ -0.64
UBXN1-202ENST00000301935 RETNQ9HD89 108 aa11.07□□□□□ -0.64
UBXN1-202ENST00000301935 CARHSP1Q9Y2V2 147 aaKnown RBP11.07□□□□□ -0.64
UBXN1-202ENST00000301935 AGRNO00468 2067 aa11.06□□□□□ -0.64
UBXN1-202ENST00000301935 TRBV20OR9-2A0A075B6H5 130 aa11.06□□□□□ -0.64
UBXN1-202ENST00000301935 LOC102724200A0A096LPH7 203 aaPredicted RBP11.06□□□□□ -0.64
UBXN1-202ENST00000301935 KLLNB2CW77 178 aa11.06□□□□□ -0.64
UBXN1-202ENST00000301935 IGKV3-20P01619 116 aa11.06□□□□□ -0.64
UBXN1-202ENST00000301935 IL17DQ8TAD2 202 aa11.06□□□□□ -0.64
UBXN1-202ENST00000301935 OCC1Q8TAD7 63 aa11.06□□□□□ -0.64
UBXN1-202ENST00000301935 Q8TAT8 98 aa11.06□□□□□ -0.64
UBXN1-202ENST00000301935 C20orf144Q9BQM9 153 aa11.06□□□□□ -0.64
UBXN1-202ENST00000301935 FABP5P3A8MUU1 101 aa11.05□□□□□ -0.64
UBXN1-202ENST00000301935 IGLV2-8P01709 118 aa11.05□□□□□ -0.64
UBXN1-202ENST00000301935 APOC4P55056 127 aa11.05□□□□□ -0.64
UBXN1-202ENST00000301935 LINC00322Q6ZN03 302 aaPredicted RBP11.05□□□□□ -0.64
UBXN1-202ENST00000301935 LINC01551Q86U37 167 aa11.05□□□□□ -0.64
UBXN1-202ENST00000301935 ZFAND2AQ8N6M9 145 aa11.05□□□□□ -0.64
UBXN1-202ENST00000301935 DAZAP1Q96EP5 407 aaKnown RBP11.05□□□□□ -0.64
UBXN1-202ENST00000301935 CSTL1Q9H114 145 aa11.05□□□□□ -0.64
UBXN1-202ENST00000301935 WFDC10AQ9H1F0 79 aa11.05□□□□□ -0.64
UBXN1-202ENST00000301935 TRAV21A0A0B4J279 112 aa11.04□□□□□ -0.64
UBXN1-202ENST00000301935 B4DEV8 164 aa11.04□□□□□ -0.64
UBXN1-202ENST00000301935 UBE2CO00762 179 aa11.04□□□□□ -0.64
UBXN1-202ENST00000301935 GCGP01275 180 aa11.04□□□□□ -0.64
UBXN1-202ENST00000301935 PRB4P10163 310 aaPredicted RBP11.04□□□□□ -0.64
UBXN1-202ENST00000301935 MGST1P10620 155 aaKnown RBP11.04□□□□□ -0.64
UBXN1-202ENST00000301935 FAM162BQ5T6X4 162 aa11.04□□□□□ -0.64
UBXN1-202ENST00000301935 C7orf71A4D174 169 aa11.03□□□□□ -0.64
UBXN1-202ENST00000301935 PFN1P07737 140 aaKnown RBP11.03□□□□□ -0.64
UBXN1-202ENST00000301935 ADCYAP1P18509 176 aa11.03□□□□□ -0.64
UBXN1-202ENST00000301935 RPL23P62829 140 aaKnown RBP11.03□□□□□ -0.64
UBXN1-202ENST00000301935 Q6AWC8 147 aa11.03□□□□□ -0.64
UBXN1-202ENST00000301935 SVBPQ8N300 66 aa11.03□□□□□ -0.64
UBXN1-202ENST00000301935 ZC2HC1AQ96GY0 325 aa11.03□□□□□ -0.64
UBXN1-202ENST00000301935 C8orf49Q96NF6 230 aa11.03□□□□□ -0.64
UBXN1-202ENST00000301935 RBMY1BA6NDE4 496 aaKnown RBP11.02□□□□□ -0.65
UBXN1-202ENST00000301935 RBMY1EA6NEQ0 496 aaKnown RBP11.02□□□□□ -0.65
UBXN1-202ENST00000301935 INSP01308 110 aa11.02□□□□□ -0.65
UBXN1-202ENST00000301935 RBMY1DP0C7P1 496 aaKnown RBP11.02□□□□□ -0.65
UBXN1-202ENST00000301935 RPL35AP18077 110 aaKnown RBP11.02□□□□□ -0.65
UBXN1-202ENST00000301935 S100A1P23297 94 aa11.02□□□□□ -0.65
UBXN1-202ENST00000301935 RNASE4P34096 147 aaKnown RBP11.02□□□□□ -0.65
UBXN1-202ENST00000301935 ADIRFQ15847 76 aa11.02□□□□□ -0.65
UBXN1-202ENST00000301935 SPINK13Q1W4C9 94 aa11.02□□□□□ -0.65
UBXN1-202ENST00000301935 FAM231DQ6ZW35 169 aa11.02□□□□□ -0.65
UBXN1-202ENST00000301935 TMEM256Q8N2U0 113 aa11.02□□□□□ -0.65
UBXN1-202ENST00000301935 M0R2Z0 102 aa11.01□□□□□ -0.65
UBXN1-202ENST00000301935 PPP1R2P9O14990 202 aa11.01□□□□□ -0.65
UBXN1-202ENST00000301935 SNAPINO95295 136 aa11.01□□□□□ -0.65
UBXN1-202ENST00000301935 C15orf54Q8N8G6 183 aa11.01□□□□□ -0.65
UBXN1-202ENST00000301935 NHLRC2Q8NBF2 726 aa11.01□□□□□ -0.65
UBXN1-202ENST00000301935 ISOC2Q96AB3 205 aa11.01□□□□□ -0.65
UBXN1-202ENST00000301935 OSTCQ9NRP0 149 aa11.01□□□□□ -0.65
UBXN1-202ENST00000301935 PGPEP1LA6NFU8 196 aa11□□□□□ -0.65
UBXN1-202ENST00000301935 K7EN84 100 aa11□□□□□ -0.65
UBXN1-202ENST00000301935 M0R036 132 aa11□□□□□ -0.65
UBXN1-202ENST00000301935 CA1P00915 261 aaPredicted RBP11□□□□□ -0.65
UBXN1-202ENST00000301935 APOC3P02656 99 aa11□□□□□ -0.65
UBXN1-202ENST00000301935 MT-ND4LP03901 98 aa11□□□□□ -0.65
UBXN1-202ENST00000301935 GFI1BQ5VTD9 330 aa11□□□□□ -0.65
UBXN1-202ENST00000301935 KCNS1Q96KK3 526 aa11□□□□□ -0.65
UBXN1-202ENST00000301935 XKRY2A2RUG3 117 aa10.99□□□□□ -0.65
UBXN1-202ENST00000301935 C19orf71A6NCJ1 209 aa10.99□□□□□ -0.65
UBXN1-202ENST00000301935 CRXO43186 299 aaPredicted RBP10.99□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 74.3 ms