RNA–Protein interactions for RNA: ENST00000297518.4

CDK5-201, Transcript of cyclin dependent kinase 5, humanhuman

TSL 1 (best) BASIC

Gene CDK5, Length 783 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5-201ENST00000297518 C11orf72Q8NBR9 251 aa8.46□□□□□ -1.06
CDK5-201ENST00000297518 GSN-AS1Q9NRJ2 163 aa8.46□□□□□ -1.06
CDK5-201ENST00000297518 TRAV8-1A0A0A6YYK1 113 aa8.45□□□□□ -1.06
CDK5-201ENST00000297518 SERTM2A0A1B0GWG4 89 aa8.45□□□□□ -1.06
CDK5-201ENST00000297518 BCL2L11O43521 198 aa8.45□□□□□ -1.06
CDK5-201ENST00000297518 SUMO1P63165 101 aaKnown RBP8.45□□□□□ -1.06
CDK5-201ENST00000297518 DAZ2Q13117 558 aaKnown RBP8.45□□□□□ -1.06
CDK5-201ENST00000297518 Q6AWC8 147 aa8.45□□□□□ -1.06
CDK5-201ENST00000297518 VPS13DQ5THJ4 4388 aa8.45□□□□□ -1.06
CDK5-201ENST00000297518 KANTRA0A1W2PQU2 76 aa8.44□□□□□ -1.06
CDK5-201ENST00000297518 A0A1W2PRE2 83 aa8.44□□□□□ -1.06
CDK5-201ENST00000297518 GAGE12BA1L429 117 aa8.44□□□□□ -1.06
CDK5-201ENST00000297518 GGTLC3B5MD39 225 aa8.44□□□□□ -1.06
CDK5-201ENST00000297518 F5H768 121 aa8.44□□□□□ -1.06
CDK5-201ENST00000297518 GAGE7O76087 117 aa8.44□□□□□ -1.06
CDK5-201ENST00000297518 TCRAP04437 139 aa8.44□□□□□ -1.06
CDK5-201ENST00000297518 GAGE12FP0CL80 117 aa8.44□□□□□ -1.06
CDK5-201ENST00000297518 GAGE12GP0CL81 117 aa8.44□□□□□ -1.06
CDK5-201ENST00000297518 GAGE12IP0CL82 117 aa8.44□□□□□ -1.06
CDK5-201ENST00000297518 P0DMU3 169 aa8.44□□□□□ -1.06
CDK5-201ENST00000297518 FAM231AP0DMU4 169 aa8.44□□□□□ -1.06
CDK5-201ENST00000297518 FAM231CP0DMU5 169 aa8.44□□□□□ -1.06
CDK5-201ENST00000297518 TCL1AP56279 114 aa8.44□□□□□ -1.06
CDK5-201ENST00000297518 IBA57Q5T440 356 aaKnown RBP8.44□□□□□ -1.06
CDK5-201ENST00000297518 C15orf53Q8NAA6 179 aa8.44□□□□□ -1.06
CDK5-201ENST00000297518 ZNF471Q9BX82 626 aaPredicted RBP8.44□□□□□ -1.06
CDK5-201ENST00000297518 TMPRSS5Q9H3S3 457 aa8.44□□□□□ -1.06
CDK5-201ENST00000297518 MAP1LC3B2A6NCE7 125 aa8.43□□□□□ -1.06
CDK5-201ENST00000297518 K7EQM0 130 aa8.43□□□□□ -1.06
CDK5-201ENST00000297518 SEC11BP0C7V7 166 aa8.43□□□□□ -1.06
CDK5-201ENST00000297518 FGF8P55075 233 aaPredicted RBP8.43□□□□□ -1.06
CDK5-201ENST00000297518 MUC21Q5SSG8 566 aa8.43□□□□□ -1.06
CDK5-201ENST00000297518 Q6ZNX1 250 aa8.43□□□□□ -1.06
CDK5-201ENST00000297518 Q6ZTI0 123 aa8.43□□□□□ -1.06
CDK5-201ENST00000297518 CYB561D1Q8N8Q1 229 aa8.43□□□□□ -1.06
CDK5-201ENST00000297518 TVP23CQ96ET8 276 aa8.43□□□□□ -1.06
CDK5-201ENST00000297518 NDFIP1Q9BT67 221 aa8.43□□□□□ -1.06
CDK5-201ENST00000297518 MAP1LC3BQ9GZQ8 125 aa8.43□□□□□ -1.06
CDK5-201ENST00000297518 TREM1Q9NP99 234 aa8.43□□□□□ -1.06
CDK5-201ENST00000297518 TP53TG3Q9ULZ0 132 aa8.43□□□□□ -1.06
CDK5-201ENST00000297518 EPDR1Q9UM22 224 aa8.43□□□□□ -1.06
CDK5-201ENST00000297518 KLF12Q9Y4X4 402 aa8.43□□□□□ -1.06
CDK5-201ENST00000297518 F6UZH7 168 aa8.42□□□□□ -1.06
CDK5-201ENST00000297518 PFDN1O60925 122 aa8.42□□□□□ -1.06
CDK5-201ENST00000297518 UBE2G2P60604 165 aa8.42□□□□□ -1.06
CDK5-201ENST00000297518 EIF5AP63241 154 aaKnown RBP8.42□□□□□ -1.06
CDK5-201ENST00000297518 ZNF415Q09FC8 603 aa8.42□□□□□ -1.06
CDK5-201ENST00000297518 FAM159AQ6UWV7 190 aa8.42□□□□□ -1.06
CDK5-201ENST00000297518 TMUB2Q71RG4 321 aa8.42□□□□□ -1.06
CDK5-201ENST00000297518 TCTE3Q8IZS6 198 aa8.42□□□□□ -1.06
CDK5-201ENST00000297518 POM121L12Q8N7R1 296 aa8.42□□□□□ -1.06
CDK5-201ENST00000297518 SGK494Q96LW2 274 aa8.42□□□□□ -1.06
CDK5-201ENST00000297518 ATG101Q9BSB4 218 aa8.42□□□□□ -1.06
CDK5-201ENST00000297518 PSG8Q9UQ74 426 aa8.42□□□□□ -1.06
CDK5-201ENST00000297518 HYDINQ4G0P3 5121 aa8.42□□□□□ -1.06
CDK5-201ENST00000297518 TRGV1A0A0A0MS02 117 aa8.41□□□□□ -1.06
CDK5-201ENST00000297518 TRAV21A0A0B4J279 112 aa8.41□□□□□ -1.06
CDK5-201ENST00000297518 FBLL1A6NHQ2 334 aaKnown RBP8.41□□□□□ -1.06
CDK5-201ENST00000297518 UMAD1C9J7I0 102 aa8.41□□□□□ -1.06
CDK5-201ENST00000297518 SPINK4O60575 86 aa8.41□□□□□ -1.06
CDK5-201ENST00000297518 IFNA7P01567 189 aa8.41□□□□□ -1.06
CDK5-201ENST00000297518 FHITP49789 147 aa8.41□□□□□ -1.06
CDK5-201ENST00000297518 FLI1Q01543 452 aaPredicted RBP8.41□□□□□ -1.06
CDK5-201ENST00000297518 UBE2DNLQ8IWF7 75 aa8.41□□□□□ -1.06
CDK5-201ENST00000297518 TMEM75Q8N9X5 138 aa8.41□□□□□ -1.06
CDK5-201ENST00000297518 STOML3Q8TAV4 291 aa8.41□□□□□ -1.06
CDK5-201ENST00000297518 NKX6-2Q9C056 277 aaPredicted RBP8.41□□□□□ -1.06
CDK5-201ENST00000297518 NAGKQ9UJ70 344 aa8.41□□□□□ -1.06
CDK5-201ENST00000297518 KMT2AQ03164 3969 aa8.4□□□□□ -1.06
CDK5-201ENST00000297518 hCG_2014768A0A024R1R8 64 aa8.4□□□□□ -1.06
CDK5-201ENST00000297518 TRGV11A0A075B6L2 103 aa8.4□□□□□ -1.06
CDK5-201ENST00000297518 TRGV2A0A075B6R0 118 aa8.4□□□□□ -1.06
CDK5-201ENST00000297518 FAM74A7A6NL05 159 aa8.4□□□□□ -1.06
CDK5-201ENST00000297518 IGLV2-11P01706 119 aa8.4□□□□□ -1.06
CDK5-201ENST00000297518 TPT1P13693 172 aaKnown RBP8.4□□□□□ -1.06
CDK5-201ENST00000297518 OR5I1Q13606 314 aa8.4□□□□□ -1.06
CDK5-201ENST00000297518 TMEM183BQ1AE95 376 aa8.4□□□□□ -1.06
CDK5-201ENST00000297518 TDRG1Q3Y452 100 aa8.4□□□□□ -1.06
CDK5-201ENST00000297518 RNF212Q495C1 297 aa8.4□□□□□ -1.06
CDK5-201ENST00000297518 TMEM183AQ8IXX5 376 aa8.4□□□□□ -1.06
CDK5-201ENST00000297518 FAM213BQ8TBF2 198 aa8.4□□□□□ -1.06
CDK5-201ENST00000297518 C18orf15Q96N68 181 aa8.4□□□□□ -1.06
CDK5-201ENST00000297518 PEX7O00628 323 aa8.39□□□□□ -1.07
CDK5-201ENST00000297518 NUDT3O95989 172 aa8.39□□□□□ -1.07
CDK5-201ENST00000297518 HOXA5P20719 270 aa8.39□□□□□ -1.07
CDK5-201ENST00000297518 PPT1P50897 306 aa8.39□□□□□ -1.07
CDK5-201ENST00000297518 LGALS9BQ3B8N2 356 aa8.39□□□□□ -1.07
CDK5-201ENST00000297518 ZFP69Q49AA0 526 aa8.39□□□□□ -1.07
CDK5-201ENST00000297518 DPPA3Q6W0C5 159 aa8.39□□□□□ -1.07
CDK5-201ENST00000297518 PRNTQ86SH4 94 aa8.39□□□□□ -1.07
CDK5-201ENST00000297518 C8orf49Q96NF6 230 aa8.39□□□□□ -1.07
CDK5-201ENST00000297518 SPXQ9BT56 116 aa8.39□□□□□ -1.07
CDK5-201ENST00000297518 MRPL16Q9NX20 251 aaKnown RBP8.39□□□□□ -1.07
CDK5-201ENST00000297518 MDFICQ9P1T7 246 aa8.39□□□□□ -1.07
CDK5-201ENST00000297518 ARL2-SNX15V9GYD0 113 aa8.39□□□□□ -1.07
CDK5-201ENST00000297518 MUC4Q99102 2169 aa8.38□□□□□ -1.07
CDK5-201ENST00000297518 TRAV26-1A0A087WT03 109 aa8.38□□□□□ -1.07
CDK5-201ENST00000297518 GCGP01275 180 aa8.38□□□□□ -1.07
CDK5-201ENST00000297518 C1QBP02746 253 aa8.38□□□□□ -1.07
CDK5-201ENST00000297518 LGALSLQ3ZCW2 172 aaPredicted RBP8.38□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 66.4 ms