RNA–Protein interactions for RNA: ENST00000296503.9

HMGB2-201, Transcript of high mobility group box 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HMGB2, Length 1,889 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB2-201ENST00000296503 BAGE2Q86Y30 109 aa9.02□□□□□ -0.97
HMGB2-201ENST00000296503 RABAC1Q9UI14 185 aa9.02□□□□□ -0.97
HMGB2-201ENST00000296503 IGKV1D-37A0A075B6S9 117 aa9.01□□□□□ -0.97
HMGB2-201ENST00000296503 PRSS46E5RG02 174 aa9.01□□□□□ -0.97
HMGB2-201ENST00000296503 CCL25O15444 150 aa9.01□□□□□ -0.97
HMGB2-201ENST00000296503 SPATA45Q537H7 98 aa9.01□□□□□ -0.97
HMGB2-201ENST00000296503 RASL11AQ6T310 242 aa9.01□□□□□ -0.97
HMGB2-201ENST00000296503 STPG4Q8N801 248 aa9.01□□□□□ -0.97
HMGB2-201ENST00000296503 TRGV9Q99603 122 aa9.01□□□□□ -0.97
HMGB2-201ENST00000296503 HNRNPA3P51991 378 aaKnown RBP9□□□□□ -0.97
HMGB2-201ENST00000296503 CMC4P56277 68 aaPredicted RBP9□□□□□ -0.97
HMGB2-201ENST00000296503 THAP8Q8NA92 274 aa9□□□□□ -0.97
HMGB2-201ENST00000296503 OCC1Q8TAD7 63 aa9□□□□□ -0.97
HMGB2-201ENST00000296503 RNASE8Q8TDE3 154 aaKnown RBP9□□□□□ -0.97
HMGB2-201ENST00000296503 RNF125Q96EQ8 232 aa9□□□□□ -0.97
HMGB2-201ENST00000296503 KCNS1Q96KK3 526 aa9□□□□□ -0.97
HMGB2-201ENST00000296503 MS4A6AQ9H2W1 248 aa9□□□□□ -0.97
HMGB2-201ENST00000296503 NRN1Q9NPD7 142 aa9□□□□□ -0.97
HMGB2-201ENST00000296503 DNAH9Q9NYC9 4486 aa9□□□□□ -0.97
HMGB2-201ENST00000296503 COL7A1Q02388 2944 aa9□□□□□ -0.97
HMGB2-201ENST00000296503 TRBV20OR9-2A0A075B6H5 130 aa9□□□□□ -0.97
HMGB2-201ENST00000296503 IGKV1OR2-108A0A075B7D4 117 aa9□□□□□ -0.97
HMGB2-201ENST00000296503 A0A1W2PPV4 95 aa9□□□□□ -0.97
HMGB2-201ENST00000296503 RBMY1BA6NDE4 496 aaKnown RBP9□□□□□ -0.97
HMGB2-201ENST00000296503 RBMY1EA6NEQ0 496 aaKnown RBP9□□□□□ -0.97
HMGB2-201ENST00000296503 RBMY1DP0C7P1 496 aaKnown RBP9□□□□□ -0.97
HMGB2-201ENST00000296503 LYZP61626 148 aa9□□□□□ -0.97
HMGB2-201ENST00000296503 STXBP6Q8NFX7 210 aa9□□□□□ -0.97
HMGB2-201ENST00000296503 OSTCQ9NRP0 149 aa9□□□□□ -0.97
HMGB2-201ENST00000296503 U3KQE9 123 aa9□□□□□ -0.97
HMGB2-201ENST00000296503 GRIFINA4D1Z8 144 aa8.99□□□□□ -0.97
HMGB2-201ENST00000296503 HLA-DQA1P01909 254 aa8.99□□□□□ -0.97
HMGB2-201ENST00000296503 ATP5G3P48201 142 aa8.99□□□□□ -0.97
HMGB2-201ENST00000296503 ODF3L2Q3SX64 289 aa8.99□□□□□ -0.97
HMGB2-201ENST00000296503 C16orf54Q6UWD8 224 aa8.99□□□□□ -0.97
HMGB2-201ENST00000296503 LINC00322Q6ZN03 302 aaPredicted RBP8.99□□□□□ -0.97
HMGB2-201ENST00000296503 RCHY1Q96PM5 261 aa8.99□□□□□ -0.97
HMGB2-201ENST00000296503 LOC102724200A0A096LPH7 203 aaPredicted RBP8.98□□□□□ -0.97
HMGB2-201ENST00000296503 HELTA6NFD8 242 aa8.98□□□□□ -0.97
HMGB2-201ENST00000296503 ZNF324O75467 553 aaPredicted RBP8.98□□□□□ -0.97
HMGB2-201ENST00000296503 TSPOP30536 169 aa8.98□□□□□ -0.97
HMGB2-201ENST00000296503 PET117Q6UWS5 81 aa8.98□□□□□ -0.97
HMGB2-201ENST00000296503 Q6ZN92 141 aa8.98□□□□□ -0.97
HMGB2-201ENST00000296503 APRG1Q8IVJ8 170 aa8.98□□□□□ -0.97
HMGB2-201ENST00000296503 UHRF2Q96PU4 802 aa8.98□□□□□ -0.97
HMGB2-201ENST00000296503 TM2D3Q9BRN9 247 aa8.98□□□□□ -0.97
HMGB2-201ENST00000296503 NPVFQ9HCQ7 196 aa8.98□□□□□ -0.97
HMGB2-201ENST00000296503 SNURFLB1AK76 121 aa8.98□□□□□ -0.97
HMGB2-201ENST00000296503 BUB3O43684 328 aa8.98□□□□□ -0.97
HMGB2-201ENST00000296503 GATA2P23769 480 aaPredicted RBP8.98□□□□□ -0.97
HMGB2-201ENST00000296503 BATFQ16520 125 aa8.98□□□□□ -0.97
HMGB2-201ENST00000296503 SMIM15Q7Z3B0 74 aa8.98□□□□□ -0.97
HMGB2-201ENST00000296503 FAM110AQ9BQ89 295 aa8.98□□□□□ -0.97
HMGB2-201ENST00000296503 SPATA25Q9BR10 227 aa8.98□□□□□ -0.97
HMGB2-201ENST00000296503 ALKBH7Q9BT30 221 aaPredicted RBP8.98□□□□□ -0.97
HMGB2-201ENST00000296503 V9GYV3 84 aa8.98□□□□□ -0.97
HMGB2-201ENST00000296503 FNDC10F2Z333 226 aa8.97□□□□□ -0.97
HMGB2-201ENST00000296503 HMGB3O15347 200 aaKnown RBP8.97□□□□□ -0.97
HMGB2-201ENST00000296503 ORM2P19652 201 aa8.97□□□□□ -0.97
HMGB2-201ENST00000296503 TMEM136Q6ZRR5 245 aa8.97□□□□□ -0.97
HMGB2-201ENST00000296503 GLMPQ8WWB7 406 aa8.97□□□□□ -0.97
HMGB2-201ENST00000296503 GGTLC1Q9BX51 225 aa8.97□□□□□ -0.97
HMGB2-201ENST00000296503 TRAV9-2A0A087WT02 112 aa8.96□□□□□ -0.97
HMGB2-201ENST00000296503 TRAV2A0A0B4J234 112 aa8.96□□□□□ -0.97
HMGB2-201ENST00000296503 ISLRO14498 428 aa8.96□□□□□ -0.97
HMGB2-201ENST00000296503 AMTP48728 403 aa8.96□□□□□ -0.97
HMGB2-201ENST00000296503 KRTDAPP60985 99 aa8.96□□□□□ -0.97
HMGB2-201ENST00000296503 FAM162BQ5T6X4 162 aa8.96□□□□□ -0.97
HMGB2-201ENST00000296503 SIGLEC15Q6ZMC9 328 aa8.96□□□□□ -0.97
HMGB2-201ENST00000296503 NIT1Q86X76 327 aa8.96□□□□□ -0.97
HMGB2-201ENST00000296503 WWC2-AS2Q96NR7 200 aa8.96□□□□□ -0.97
HMGB2-201ENST00000296503 DERL1Q9BUN8 251 aa8.96□□□□□ -0.97
HMGB2-201ENST00000296503 MAP6D1Q9H9H5 199 aa8.96□□□□□ -0.97
HMGB2-201ENST00000296503 LINC00869P0C866 280 aa8.96□□□□□ -0.98
HMGB2-201ENST00000296503 C3orf79P0CE67 100 aa8.96□□□□□ -0.98
HMGB2-201ENST00000296503 RPL35AP18077 110 aaKnown RBP8.96□□□□□ -0.98
HMGB2-201ENST00000296503 DEFB131AP59861 70 aa8.96□□□□□ -0.98
HMGB2-201ENST00000296503 TEPPQ6URK8 271 aa8.96□□□□□ -0.98
HMGB2-201ENST00000296503 OR1B1Q8NGR6 318 aa8.96□□□□□ -0.98
HMGB2-201ENST00000296503 K7EN84 100 aa8.95□□□□□ -0.98
HMGB2-201ENST00000296503 K7EQG2 157 aa8.95□□□□□ -0.98
HMGB2-201ENST00000296503 OR8I2Q8N0Y5 310 aa8.95□□□□□ -0.98
HMGB2-201ENST00000296503 BORCS7Q96B45 105 aa8.95□□□□□ -0.98
HMGB2-201ENST00000296503 SCO2A0A1W2PP80 73 aa8.94□□□□□ -0.98
HMGB2-201ENST00000296503 SMIM27A0A1W2PRY6 76 aa8.94□□□□□ -0.98
HMGB2-201ENST00000296503 ARL14EPLP0DKL9 152 aa8.94□□□□□ -0.98
HMGB2-201ENST00000296503 GCHFRP30047 84 aa8.94□□□□□ -0.98
HMGB2-201ENST00000296503 S100A7P31151 101 aa8.94□□□□□ -0.98
HMGB2-201ENST00000296503 APOC4P55056 127 aa8.94□□□□□ -0.98
HMGB2-201ENST00000296503 RETNQ9HD89 108 aa8.94□□□□□ -0.98
HMGB2-201ENST00000296503 NBEAL2Q6ZNJ1 2754 aa8.94□□□□□ -0.98
HMGB2-201ENST00000296503 ZNF688P0C7X2 276 aa8.94□□□□□ -0.98
HMGB2-201ENST00000296503 STPG3Q8N7X2 389 aa8.94□□□□□ -0.98
HMGB2-201ENST00000296503 DCANP1Q8TF63 244 aa8.94□□□□□ -0.98
HMGB2-201ENST00000296503 TSKUQ8WUA8 353 aa8.94□□□□□ -0.98
HMGB2-201ENST00000296503 TMEM167BQ9NRX6 74 aa8.94□□□□□ -0.98
HMGB2-201ENST00000296503 NAT8BQ9UHF3 227 aa8.94□□□□□ -0.98
HMGB2-201ENST00000296503 CRXO43186 299 aaPredicted RBP8.93□□□□□ -0.98
HMGB2-201ENST00000296503 RAB31Q13636 194 aa8.93□□□□□ -0.98
HMGB2-201ENST00000296503 OR4C5Q8NGB2 326 aa8.93□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 79 ms