RNA–Protein interactions for RNA: ENST00000292779.3

CCDC116-201, Transcript of coiled-coil domain containing 116, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene CCDC116, Length 2,260 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC116-201ENST00000292779 TRAV41A0A0B4J266 112 aa11.58□□□□□ -0.56
CCDC116-201ENST00000292779 NPYP01303 97 aa11.58□□□□□ -0.56
CCDC116-201ENST00000292779 TRAV40A0A0B4J280 105 aa11.57□□□□□ -0.56
CCDC116-201ENST00000292779 FXYD7P58549 80 aa11.57□□□□□ -0.56
CCDC116-201ENST00000292779 SLC25A34Q6PIV7 304 aa11.57□□□□□ -0.56
CCDC116-201ENST00000292779 PIFOQ8TCI5 191 aa11.57□□□□□ -0.56
CCDC116-201ENST00000292779 CCL19Q99731 98 aa11.57□□□□□ -0.56
CCDC116-201ENST00000292779 PIMREGQ9BSJ6 248 aa11.57□□□□□ -0.56
CCDC116-201ENST00000292779 AGPAT4-IT1Q9H0P7 198 aa11.57□□□□□ -0.56
CCDC116-201ENST00000292779 SCRT2Q9NQ03 307 aa11.57□□□□□ -0.56
CCDC116-201ENST00000292779 HECTD1Q9ULT8 2610 aa11.57□□□□□ -0.56
CCDC116-201ENST00000292779 IGHV1-69DA0A0B4J2H0 117 aa11.57□□□□□ -0.56
CCDC116-201ENST00000292779 J3QKU1 62 aa11.57□□□□□ -0.56
CCDC116-201ENST00000292779 IGHV1-69P01742 117 aa11.57□□□□□ -0.56
CCDC116-201ENST00000292779 LINC01559Q495D7 138 aa11.57□□□□□ -0.56
CCDC116-201ENST00000292779 C19orf54Q5BKX5 351 aa11.57□□□□□ -0.56
CCDC116-201ENST00000292779 C8orf86Q6ZUL3 223 aa11.57□□□□□ -0.56
CCDC116-201ENST00000292779 OR8A1Q8NGG7 326 aa11.57□□□□□ -0.56
CCDC116-201ENST00000292779 COX6B1P14854 86 aa11.56□□□□□ -0.56
CCDC116-201ENST00000292779 PPIFP30405 207 aaKnown RBP11.56□□□□□ -0.56
CCDC116-201ENST00000292779 CNFNQ9BYD5 112 aa11.56□□□□□ -0.56
CCDC116-201ENST00000292779 U3KQE9 123 aa11.56□□□□□ -0.56
CCDC116-201ENST00000292779 Q6ZVH6 145 aa11.56□□□□□ -0.56
CCDC116-201ENST00000292779 RNF185Q96GF1 192 aa11.56□□□□□ -0.56
CCDC116-201ENST00000292779 MS4A6AQ9H2W1 248 aa11.56□□□□□ -0.56
CCDC116-201ENST00000292779 NAV2Q8IVL1 2488 aa11.55□□□□□ -0.56
CCDC116-201ENST00000292779 ZNF469Q96JG9 3925 aaPredicted RBP11.55□□□□□ -0.56
CCDC116-201ENST00000292779 PRSS57Q6UWY2 283 aa11.55□□□□□ -0.56
CCDC116-201ENST00000292779 C10orf105Q8TEF2 133 aa11.55□□□□□ -0.56
CCDC116-201ENST00000292779 IGKV3D-20A0A0C4DH25 116 aa11.55□□□□□ -0.56
CCDC116-201ENST00000292779 TRGV3P03979 118 aa11.55□□□□□ -0.56
CCDC116-201ENST00000292779 MPV17L2Q567V2 206 aa11.55□□□□□ -0.56
CCDC116-201ENST00000292779 C11orf21Q9P2W6 132 aa11.55□□□□□ -0.56
CCDC116-201ENST00000292779 PDZD2O15018 2839 aa11.54□□□□□ -0.56
CCDC116-201ENST00000292779 FAM223BA6NKX1 122 aa11.54□□□□□ -0.56
CCDC116-201ENST00000292779 GAS8-AS1O95177 125 aa11.54□□□□□ -0.56
CCDC116-201ENST00000292779 IGHV4-38-2P0DP08 117 aa11.54□□□□□ -0.56
CCDC116-201ENST00000292779 TMEM78Q5T7P6 136 aa11.54□□□□□ -0.56
CCDC116-201ENST00000292779 FAM223AQ8IWN6 122 aa11.54□□□□□ -0.56
CCDC116-201ENST00000292779 HBDP02042 147 aa11.53□□□□□ -0.56
CCDC116-201ENST00000292779 CRIP2P52943 208 aaPredicted RBP11.53□□□□□ -0.56
CCDC116-201ENST00000292779 MRPL53Q96EL3 112 aaKnown RBP11.53□□□□□ -0.56
CCDC116-201ENST00000292779 UNC79Q9P2D8 2635 aa11.53□□□□□ -0.56
CCDC116-201ENST00000292779 TCF21O43680 179 aa11.53□□□□□ -0.56
CCDC116-201ENST00000292779 HIST1H1AQ02539 215 aaPredicted RBP11.53□□□□□ -0.56
CCDC116-201ENST00000292779 IGHV4-30-2A0A087WSY4 118 aa11.52□□□□□ -0.56
CCDC116-201ENST00000292779 NUDT3O95989 172 aa11.52□□□□□ -0.56
CCDC116-201ENST00000292779 ARL3P36405 182 aa11.52□□□□□ -0.56
CCDC116-201ENST00000292779 ATP5J2P56134 94 aa11.52□□□□□ -0.56
CCDC116-201ENST00000292779 LY6EQ16553 131 aa11.52□□□□□ -0.56
CCDC116-201ENST00000292779 ORAOV1Q8WV07 137 aa11.52□□□□□ -0.56
CCDC116-201ENST00000292779 MEGF9Q9H1U4 602 aa11.52□□□□□ -0.56
CCDC116-201ENST00000292779 COX11Q9Y6N1 276 aa11.52□□□□□ -0.56
CCDC116-201ENST00000292779 TRBV12-3P01733 135 aa11.52□□□□□ -0.57
CCDC116-201ENST00000292779 CLEC2AQ6UVW9 174 aa11.52□□□□□ -0.57
CCDC116-201ENST00000292779 C9orf47Q6ZRZ4 202 aa11.52□□□□□ -0.57
CCDC116-201ENST00000292779 GLMPQ8WWB7 406 aa11.52□□□□□ -0.57
CCDC116-201ENST00000292779 C16orf92Q96LL3 132 aa11.52□□□□□ -0.57
CCDC116-201ENST00000292779 ATP6V0BQ99437 205 aa11.52□□□□□ -0.57
CCDC116-201ENST00000292779 PPBPP02775 128 aa11.51□□□□□ -0.57
CCDC116-201ENST00000292779 Q6ZQT7 251 aa11.51□□□□□ -0.57
CCDC116-201ENST00000292779 MAP1LC3AQ9H492 121 aa11.51□□□□□ -0.57
CCDC116-201ENST00000292779 HIF1ANQ9NWT6 349 aa11.51□□□□□ -0.57
CCDC116-201ENST00000292779 COX8AP10176 69 aa11.51□□□□□ -0.57
CCDC116-201ENST00000292779 CACNG7P62955 275 aa11.51□□□□□ -0.57
CCDC116-201ENST00000292779 FOXE3Q13461 319 aa11.51□□□□□ -0.57
CCDC116-201ENST00000292779 LGALS9BQ3B8N2 356 aa11.51□□□□□ -0.57
CCDC116-201ENST00000292779 LGALS9CQ6DKI2 356 aa11.51□□□□□ -0.57
CCDC116-201ENST00000292779 UNQ9165/PRO28630Q6UXU0 137 aa11.51□□□□□ -0.57
CCDC116-201ENST00000292779 NDUFS8O00217 210 aa11.5□□□□□ -0.57
CCDC116-201ENST00000292779 SMAD7O15105 426 aaKnown RBP11.5□□□□□ -0.57
CCDC116-201ENST00000292779 EVI2AP22794 236 aa11.5□□□□□ -0.57
CCDC116-201ENST00000292779 BVES-AS1Q5T3Y7 98 aa11.5□□□□□ -0.57
CCDC116-201ENST00000292779 ZNF738Q8NE65 137 aa11.5□□□□□ -0.57
CCDC116-201ENST00000292779 IFI27L1Q96BM0 104 aa11.5□□□□□ -0.57
CCDC116-201ENST00000292779 C20orf173Q96LM9 149 aa11.5□□□□□ -0.57
CCDC116-201ENST00000292779 TNFRSF6BO95407 300 aa11.49□□□□□ -0.57
CCDC116-201ENST00000292779 IGF1P05019 195 aa11.49□□□□□ -0.57
CCDC116-201ENST00000292779 GATA1P15976 413 aaPredicted RBP11.49□□□□□ -0.57
CCDC116-201ENST00000292779 CCDC168Q8NDH2 2452 aa11.49□□□□□ -0.57
CCDC116-201ENST00000292779 IGHV7-4-1A0A0J9YVY3 117 aa11.49□□□□□ -0.57
CCDC116-201ENST00000292779 H3BUX3 64 aa11.49□□□□□ -0.57
CCDC116-201ENST00000292779 SNAI2O43623 268 aa11.49□□□□□ -0.57
CCDC116-201ENST00000292779 ANKRD39Q53RE8 183 aa11.49□□□□□ -0.57
CCDC116-201ENST00000292779 WFDC3Q8IUB2 231 aa11.49□□□□□ -0.57
CCDC116-201ENST00000292779 C9orf139Q6ZV77 190 aa11.48□□□□□ -0.57
CCDC116-201ENST00000292779 LINC01546A6NGU7 62 aa11.48□□□□□ -0.57
CCDC116-201ENST00000292779 IGHV3-11P01762 117 aa11.48□□□□□ -0.57
CCDC116-201ENST00000292779 PRR9Q5T870 116 aa11.48□□□□□ -0.57
CCDC116-201ENST00000292779 C12orf54Q6X4T0 127 aa11.48□□□□□ -0.57
CCDC116-201ENST00000292779 GPHB5Q86YW7 130 aa11.48□□□□□ -0.57
CCDC116-201ENST00000292779 PPP1R14DQ9NXH3 145 aa11.48□□□□□ -0.57
CCDC116-201ENST00000292779 TEX15Q9BXT5 2789 aa11.48□□□□□ -0.57
CCDC116-201ENST00000292779 NDUFA4O00483 81 aa11.47□□□□□ -0.57
CCDC116-201ENST00000292779 IGHG2P01859 326 aa11.47□□□□□ -0.57
CCDC116-201ENST00000292779 C2orf91Q6ZV80 131 aa11.47□□□□□ -0.57
CCDC116-201ENST00000292779 C18orf15Q96N68 181 aa11.47□□□□□ -0.57
CCDC116-201ENST00000292779 KLK15Q9H2R5 256 aa11.47□□□□□ -0.57
CCDC116-201ENST00000292779 AKAP9Q99996 3911 aa11.47□□□□□ -0.57
CCDC116-201ENST00000292779 ITPR3Q14573 2671 aa11.47□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 53.5 ms