RNA–Protein interactions for RNA: ENST00000287543.4

MALSU1-201, Transcript of mitochondrial assembly of ribosomal large subunit 1, humanhuman

TSL 2

Gene MALSU1, Length 572 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MALSU1-201ENST00000287543 Q8TAT8 98 aa13.28□□□□□ -0.28
MALSU1-201ENST00000287543 ACTR3CQ9C0K3 210 aaPredicted RBP13.28□□□□□ -0.28
MALSU1-201ENST00000287543 TAAR5O14804 337 aa13.27□□□□□ -0.29
MALSU1-201ENST00000287543 ARL14EPLP0DKL9 152 aa13.27□□□□□ -0.29
MALSU1-201ENST00000287543 RAB24Q969Q5 203 aa13.27□□□□□ -0.29
MALSU1-201ENST00000287543 ST6GAL2Q96JF0 529 aa13.27□□□□□ -0.29
MALSU1-201ENST00000287543 TMEM167BQ9NRX6 74 aa13.27□□□□□ -0.29
MALSU1-201ENST00000287543 RNF222A6NCQ9 220 aa13.26□□□□□ -0.29
MALSU1-201ENST00000287543 HMGB3O15347 200 aaKnown RBP13.26□□□□□ -0.29
MALSU1-201ENST00000287543 EIF3GO75821 320 aaKnown RBP eCLIP13.26□□□□□ -0.29
MALSU1-201ENST00000287543 CXorf1O96002 111 aa13.26□□□□□ -0.29
MALSU1-201ENST00000287543 PRR9Q5T870 116 aa13.26□□□□□ -0.29
MALSU1-201ENST00000287543 Q6AWC8 147 aa13.26□□□□□ -0.29
MALSU1-201ENST00000287543 Q6ZTI0 123 aa13.26□□□□□ -0.29
MALSU1-201ENST00000287543 SUN5Q8TC36 379 aa13.26□□□□□ -0.29
MALSU1-201ENST00000287543 TRGV1A0A0A0MS02 117 aa13.25□□□□□ -0.29
MALSU1-201ENST00000287543 K7EQM0 130 aa13.25□□□□□ -0.29
MALSU1-201ENST00000287543 SPINK4O60575 86 aa13.25□□□□□ -0.29
MALSU1-201ENST00000287543 ZNF415Q09FC8 603 aa13.25□□□□□ -0.29
MALSU1-201ENST00000287543 RPL7L1Q6DKI1 246 aaKnown RBP13.25□□□□□ -0.29
MALSU1-201ENST00000287543 FAM159AQ6UWV7 190 aa13.25□□□□□ -0.29
MALSU1-201ENST00000287543 GOLT1AQ6ZVE7 132 aa13.25□□□□□ -0.29
MALSU1-201ENST00000287543 TRAV26-1A0A087WT03 109 aa13.24□□□□□ -0.29
MALSU1-201ENST00000287543 M0R2N4 97 aa13.24□□□□□ -0.29
MALSU1-201ENST00000287543 GCHFRP30047 84 aa13.24□□□□□ -0.29
MALSU1-201ENST00000287543 SOHLH1Q5JUK2 328 aa13.24□□□□□ -0.29
MALSU1-201ENST00000287543 C5orf17Q8NAS9 161 aa13.24□□□□□ -0.29
MALSU1-201ENST00000287543 NDFIP1Q9BT67 221 aa13.24□□□□□ -0.29
MALSU1-201ENST00000287543 RPH3ALQ9UNE2 315 aa13.24□□□□□ -0.29
MALSU1-201ENST00000287543 KLF12Q9Y4X4 402 aa13.24□□□□□ -0.29
MALSU1-201ENST00000287543 TRGV11A0A075B6L2 103 aa13.23□□□□□ -0.29
MALSU1-201ENST00000287543 SH3BGRL3Q9H299 93 aa13.23□□□□□ -0.29
MALSU1-201ENST00000287543 TMPRSS5Q9H3S3 457 aa13.23□□□□□ -0.29
MALSU1-201ENST00000287543 IGLV2-18A0A075B6J9 118 aa13.22□□□□□ -0.29
MALSU1-201ENST00000287543 TRAV21A0A0B4J279 112 aa13.22□□□□□ -0.29
MALSU1-201ENST00000287543 FBLL1A6NHQ2 334 aaKnown RBP13.22□□□□□ -0.29
MALSU1-201ENST00000287543 HOXA5P20719 270 aa13.22□□□□□ -0.29
MALSU1-201ENST00000287543 SLAQ13239 276 aa13.22□□□□□ -0.29
MALSU1-201ENST00000287543 Q6ZR54 194 aa13.22□□□□□ -0.29
MALSU1-201ENST00000287543 SPXQ9BT56 116 aa13.22□□□□□ -0.29
MALSU1-201ENST00000287543 TREM1Q9NP99 234 aa13.22□□□□□ -0.29
MALSU1-201ENST00000287543 TP53TG3Q9ULZ0 132 aa13.22□□□□□ -0.29
MALSU1-201ENST00000287543 TDRG1Q3Y452 100 aa13.21□□□□□ -0.29
MALSU1-201ENST00000287543 MUC21Q5SSG8 566 aa13.21□□□□□ -0.29
MALSU1-201ENST00000287543 A0A0J9YY99 117 aa13.2□□□□□ -0.3
MALSU1-201ENST00000287543 ARPC5O15511 151 aa13.2□□□□□ -0.3
MALSU1-201ENST00000287543 TCRAP04437 139 aa13.2□□□□□ -0.3
MALSU1-201ENST00000287543 AKR1C8PQ5T2L2 129 aa13.2□□□□□ -0.3
MALSU1-201ENST00000287543 DNAH6Q9C0G6 4158 aa13.2□□□□□ -0.3
MALSU1-201ENST00000287543 CTXND1A0A1B0GTU2 59 aa13.19□□□□□ -0.3
MALSU1-201ENST00000287543 A0A1W2PRE2 83 aa13.19□□□□□ -0.3
MALSU1-201ENST00000287543 G3V3Q6 166 aa13.19□□□□□ -0.3
MALSU1-201ENST00000287543 SUMO1P63165 101 aaKnown RBP13.19□□□□□ -0.3
MALSU1-201ENST00000287543 GNG5P63218 68 aa13.19□□□□□ -0.3
MALSU1-201ENST00000287543 Q6ZQT7 251 aa13.19□□□□□ -0.3
MALSU1-201ENST00000287543 IQCF2Q8IXL9 164 aa13.19□□□□□ -0.3
MALSU1-201ENST00000287543 ZNRF2Q8NHG8 242 aa13.19□□□□□ -0.3
MALSU1-201ENST00000287543 KCNS1Q96KK3 526 aa13.19□□□□□ -0.3
MALSU1-201ENST00000287543 NKX6-2Q9C056 277 aaPredicted RBP13.19□□□□□ -0.3
MALSU1-201ENST00000287543 EPDR1Q9UM22 224 aa13.19□□□□□ -0.3
MALSU1-201ENST00000287543 TMEM183BQ1AE95 376 aa13.18□□□□□ -0.3
MALSU1-201ENST00000287543 SSX7Q7RTT5 188 aa13.18□□□□□ -0.3
MALSU1-201ENST00000287543 TMEM183AQ8IXX5 376 aa13.18□□□□□ -0.3
MALSU1-201ENST00000287543 MRPL16Q9NX20 251 aaKnown RBP13.18□□□□□ -0.3
MALSU1-201ENST00000287543 LINC00588Q9Y4M8 146 aa13.18□□□□□ -0.3
MALSU1-201ENST00000287543 DNAH10Q8IVF4 4471 aa13.17□□□□□ -0.3
MALSU1-201ENST00000287543 TRAV8-1A0A0A6YYK1 113 aa13.17□□□□□ -0.3
MALSU1-201ENST00000287543 C1orf134Q5TEV5 83 aa13.17□□□□□ -0.3
MALSU1-201ENST00000287543 CYB561D1Q8N8Q1 229 aa13.17□□□□□ -0.3
MALSU1-201ENST00000287543 MDFICQ9P1T7 246 aa13.17□□□□□ -0.3
MALSU1-201ENST00000287543 PRO0255Q9UI72 69 aa13.17□□□□□ -0.3
MALSU1-201ENST00000287543 NAGKQ9UJ70 344 aa13.17□□□□□ -0.3
MALSU1-201ENST00000287543 PRSS29PA6NIE9 313 aa13.16□□□□□ -0.3
MALSU1-201ENST00000287543 RTL8CO15255 209 aa13.16□□□□□ -0.3
MALSU1-201ENST00000287543 PAX4O43316 350 aa13.16□□□□□ -0.3
MALSU1-201ENST00000287543 ZNF345Q14585 488 aa13.16□□□□□ -0.3
MALSU1-201ENST00000287543 ZFP69Q49AA0 526 aa13.16□□□□□ -0.3
MALSU1-201ENST00000287543 SAPCD1Q5SSQ6 148 aa13.16□□□□□ -0.3
MALSU1-201ENST00000287543 RASL10AQ92737 203 aa13.16□□□□□ -0.3
MALSU1-201ENST00000287543 TVP23CQ96ET8 276 aa13.16□□□□□ -0.3
MALSU1-201ENST00000287543 SDF2L1Q9HCN8 221 aa13.16□□□□□ -0.3
MALSU1-201ENST00000287543 PSG8Q9UQ74 426 aa13.16□□□□□ -0.3
MALSU1-201ENST00000287543 NBDYA0A0U1RRE5 68 aa13.15□□□□□ -0.3
MALSU1-201ENST00000287543 HMSDA8MTL9 139 aa13.15□□□□□ -0.3
MALSU1-201ENST00000287543 GGTLC3B5MD39 225 aa13.15□□□□□ -0.3
MALSU1-201ENST00000287543 PPT1P50897 306 aa13.15□□□□□ -0.3
MALSU1-201ENST00000287543 FLI1Q01543 452 aaPredicted RBP13.15□□□□□ -0.3
MALSU1-201ENST00000287543 TMEM75Q8N9X5 138 aa13.15□□□□□ -0.3
MALSU1-201ENST00000287543 STOML3Q8TAV4 291 aa13.15□□□□□ -0.3
MALSU1-201ENST00000287543 VSIG2Q96IQ7 327 aa13.15□□□□□ -0.3
MALSU1-201ENST00000287543 UPK3BQ9BT76 320 aa13.15□□□□□ -0.3
MALSU1-201ENST00000287543 Q9H8V8 135 aa13.15□□□□□ -0.3
MALSU1-201ENST00000287543 CYTL1Q9NRR1 136 aa13.15□□□□□ -0.3
MALSU1-201ENST00000287543 F6UZH7 168 aa13.14□□□□□ -0.31
MALSU1-201ENST00000287543 IFNA7P01567 189 aa13.14□□□□□ -0.31
MALSU1-201ENST00000287543 ZNF726P1Q15940 193 aa13.14□□□□□ -0.31
MALSU1-201ENST00000287543 SMUG1Q53HV7 270 aa13.14□□□□□ -0.31
MALSU1-201ENST00000287543 KCNRGQ8N5I3 272 aa13.14□□□□□ -0.31
MALSU1-201ENST00000287543 HHLA3Q9XRX5 114 aa13.14□□□□□ -0.31
MALSU1-201ENST00000287543 ICOSQ9Y6W8 199 aa13.14□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms