RNA–Protein interactions for RNA: ENST00000284771.6

PDLIM3-203, Transcript of PDZ and LIM domain 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PDLIM3, Length 1,672 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM3-203ENST00000284771 GPX1P07203 203 aa15.92■□□□□ 0.14
PDLIM3-203ENST00000284771 RBMY1A1P0DJD3 496 aaKnown RBP15.92■□□□□ 0.14
PDLIM3-203ENST00000284771 RBMY1CP0DJD4 496 aa15.92■□□□□ 0.14
PDLIM3-203ENST00000284771 NUTF2P61970 127 aaKnown RBP15.92■□□□□ 0.14
PDLIM3-203ENST00000284771 BTN1A1Q13410 526 aa15.92■□□□□ 0.14
PDLIM3-203ENST00000284771 RBMY1FQ15415 496 aaKnown RBP15.92■□□□□ 0.14
PDLIM3-203ENST00000284771 GFI1BQ5VTD9 330 aa15.92■□□□□ 0.14
PDLIM3-203ENST00000284771 NBEAL2Q6ZNJ1 2754 aa15.92■□□□□ 0.14
PDLIM3-203ENST00000284771 K7EN84 100 aa15.92■□□□□ 0.14
PDLIM3-203ENST00000284771 LEPP41159 167 aa15.92■□□□□ 0.14
PDLIM3-203ENST00000284771 NDUFA5Q16718 116 aa15.92■□□□□ 0.14
PDLIM3-203ENST00000284771 MORN3Q6PF18 240 aaPredicted RBP15.92■□□□□ 0.14
PDLIM3-203ENST00000284771 CSNK1G2-AS1Q8NCQ2 148 aa15.92■□□□□ 0.14
PDLIM3-203ENST00000284771 NDFIP1Q9BT67 221 aa15.92■□□□□ 0.14
PDLIM3-203ENST00000284771 RNASE4P34096 147 aaKnown RBP15.91■□□□□ 0.14
PDLIM3-203ENST00000284771 KIR2DL5BA0A0G2JN68 375 aa15.9■□□□□ 0.14
PDLIM3-203ENST00000284771 KIR2DL5BA0A0G2JPC4 375 aa15.9■□□□□ 0.14
PDLIM3-203ENST00000284771 CA1P00915 261 aaPredicted RBP15.9■□□□□ 0.14
PDLIM3-203ENST00000284771 GCGP01275 180 aa15.9■□□□□ 0.14
PDLIM3-203ENST00000284771 TSPOP30536 169 aa15.9■□□□□ 0.14
PDLIM3-203ENST00000284771 FAM74A3Q4VXF1 159 aa15.9■□□□□ 0.14
PDLIM3-203ENST00000284771 DEFB121Q5J5C9 76 aa15.9■□□□□ 0.14
PDLIM3-203ENST00000284771 KIR2DL5AQ8N109 375 aa15.9■□□□□ 0.14
PDLIM3-203ENST00000284771 KIR2DL5BQ8NHK3 375 aa15.9■□□□□ 0.14
PDLIM3-203ENST00000284771 MEGF8Q7Z7M0 2845 aa15.9■□□□□ 0.14
PDLIM3-203ENST00000284771 ZNF324O75467 553 aaPredicted RBP15.89■□□□□ 0.13
PDLIM3-203ENST00000284771 TMEM241Q24JQ0 296 aa15.89■□□□□ 0.13
PDLIM3-203ENST00000284771 SMUG1Q53HV7 270 aa15.89■□□□□ 0.13
PDLIM3-203ENST00000284771 LINC01551Q86U37 167 aa15.89■□□□□ 0.13
PDLIM3-203ENST00000284771 TRAV12-3A0A0B4J271 114 aa15.89■□□□□ 0.13
PDLIM3-203ENST00000284771 OR5I1Q13606 314 aa15.89■□□□□ 0.13
PDLIM3-203ENST00000284771 SMIM12Q96EX1 92 aa15.89■□□□□ 0.13
PDLIM3-203ENST00000284771 SDF2L1Q9HCN8 221 aa15.89■□□□□ 0.13
PDLIM3-203ENST00000284771 C7orf71A4D174 169 aa15.88■□□□□ 0.13
PDLIM3-203ENST00000284771 F8W036 122 aa15.88■□□□□ 0.13
PDLIM3-203ENST00000284771 Q6AWC8 147 aa15.88■□□□□ 0.13
PDLIM3-203ENST00000284771 C1orf158Q8N1D5 194 aa15.88■□□□□ 0.13
PDLIM3-203ENST00000284771 MGST1P10620 155 aaKnown RBP15.87■□□□□ 0.13
PDLIM3-203ENST00000284771 APOC4P55056 127 aa15.87■□□□□ 0.13
PDLIM3-203ENST00000284771 RPL23P62829 140 aaKnown RBP15.87■□□□□ 0.13
PDLIM3-203ENST00000284771 DEFA6Q01524 100 aa15.87■□□□□ 0.13
PDLIM3-203ENST00000284771 C10orf91Q5T1B1 145 aa15.87■□□□□ 0.13
PDLIM3-203ENST00000284771 SEC11CQ9BY50 192 aa15.87■□□□□ 0.13
PDLIM3-203ENST00000284771 NAT8Q9UHE5 227 aa15.87■□□□□ 0.13
PDLIM3-203ENST00000284771 LY96Q9Y6Y9 160 aa15.87■□□□□ 0.13
PDLIM3-203ENST00000284771 PRR27Q6MZM9 219 aa15.86■□□□□ 0.13
PDLIM3-203ENST00000284771 NIPSNAP3BQ9BS92 247 aa15.86■□□□□ 0.13
PDLIM3-203ENST00000284771 C11orf21Q9P2W6 132 aa15.86■□□□□ 0.13
PDLIM3-203ENST00000284771 PFN1P07737 140 aaKnown RBP15.86■□□□□ 0.13
PDLIM3-203ENST00000284771 AMBPP02760 352 aa15.85■□□□□ 0.13
PDLIM3-203ENST00000284771 PRM2P04554 102 aa15.85■□□□□ 0.13
PDLIM3-203ENST00000284771 SBSPONQ8IVN8 264 aa15.85■□□□□ 0.13
PDLIM3-203ENST00000284771 MRAPQ8TCY5 172 aa15.85■□□□□ 0.13
PDLIM3-203ENST00000284771 C1QTNF4Q9BXJ3 329 aa15.85■□□□□ 0.13
PDLIM3-203ENST00000284771 DEFB135Q30KP9 77 aa15.84■□□□□ 0.13
PDLIM3-203ENST00000284771 ZNF575Q86XF7 245 aa15.84■□□□□ 0.13
PDLIM3-203ENST00000284771 FABP5P3A8MUU1 101 aa15.83■□□□□ 0.13
PDLIM3-203ENST00000284771 SH2D1AO60880 128 aa15.83■□□□□ 0.13
PDLIM3-203ENST00000284771 INSP01308 110 aa15.83■□□□□ 0.13
PDLIM3-203ENST00000284771 C19orf71A6NCJ1 209 aa15.83■□□□□ 0.12
PDLIM3-203ENST00000284771 FAM162BQ5T6X4 162 aa15.83■□□□□ 0.12
PDLIM3-203ENST00000284771 RNASE7Q9H1E1 156 aaKnown RBP15.83■□□□□ 0.12
PDLIM3-203ENST00000284771 CARHSP1Q9Y2V2 147 aaKnown RBP15.83■□□□□ 0.12
PDLIM3-203ENST00000284771 TRAV21A0A0B4J279 112 aa15.82■□□□□ 0.12
PDLIM3-203ENST00000284771 UBE2CO00762 179 aa15.82■□□□□ 0.12
PDLIM3-203ENST00000284771 ADIRFQ15847 76 aa15.82■□□□□ 0.12
PDLIM3-203ENST00000284771 ZNF705AQ6ZN79 300 aaPredicted RBP15.82■□□□□ 0.12
PDLIM3-203ENST00000284771 ISOC2Q96AB3 205 aa15.82■□□□□ 0.12
PDLIM3-203ENST00000284771 PRKDCP78527 4128 aaKnown RBP15.81■□□□□ 0.12
PDLIM3-203ENST00000284771 IGHV3OR16-12A0A075B7B8 117 aa15.81■□□□□ 0.12
PDLIM3-203ENST00000284771 MUC21Q5SSG8 566 aa15.81■□□□□ 0.12
PDLIM3-203ENST00000284771 Q6ZWC4 215 aa15.81■□□□□ 0.12
PDLIM3-203ENST00000284771 IGKV3D-20A0A0C4DH25 116 aa15.8■□□□□ 0.12
PDLIM3-203ENST00000284771 NUDT10Q8NFP7 164 aa15.8■□□□□ 0.12
PDLIM3-203ENST00000284771 NUDT11Q96G61 164 aa15.8■□□□□ 0.12
PDLIM3-203ENST00000284771 C20orf144Q9BQM9 153 aa15.8■□□□□ 0.12
PDLIM3-203ENST00000284771 KRBOX1C9JBD0 128 aa15.79■□□□□ 0.12
PDLIM3-203ENST00000284771 LINC01587Q99440 93 aa15.79■□□□□ 0.12
PDLIM3-203ENST00000284771 M0R036 132 aa15.79■□□□□ 0.12
PDLIM3-203ENST00000284771 RPL19P84098 196 aaKnown RBP15.79■□□□□ 0.12
PDLIM3-203ENST00000284771 ANXA2RQ3ZCQ2 193 aa15.79■□□□□ 0.12
PDLIM3-203ENST00000284771 RNF183Q96D59 192 aa15.79■□□□□ 0.12
PDLIM3-203ENST00000284771 H7BYZ3 331 aa15.78■□□□□ 0.12
PDLIM3-203ENST00000284771 HTN1P15515 57 aa15.78■□□□□ 0.12
PDLIM3-203ENST00000284771 RETNQ9HD89 108 aa15.78■□□□□ 0.12
PDLIM3-203ENST00000284771 NAGKQ9UJ70 344 aa15.78■□□□□ 0.12
PDLIM3-203ENST00000284771 TP53TG3Q9ULZ0 132 aa15.78■□□□□ 0.12
PDLIM3-203ENST00000284771 TENM3Q9P273 2699 aa15.78■□□□□ 0.12
PDLIM3-203ENST00000284771 DNAH9Q9NYC9 4486 aa15.78■□□□□ 0.12
PDLIM3-203ENST00000284771 PNRC1Q12796 327 aaPredicted RBP15.77■□□□□ 0.12
PDLIM3-203ENST00000284771 TDRG1Q3Y452 100 aa15.77■□□□□ 0.12
PDLIM3-203ENST00000284771 IBA57Q5T440 356 aaKnown RBP15.77■□□□□ 0.12
PDLIM3-203ENST00000284771 FAM231DQ6ZW35 169 aa15.77■□□□□ 0.12
PDLIM3-203ENST00000284771 RCHY1Q96PM5 261 aa15.77■□□□□ 0.12
PDLIM3-203ENST00000284771 OVOL2Q9BRP0 275 aa15.77■□□□□ 0.12
PDLIM3-203ENST00000284771 TMEM208Q9BTX3 173 aa15.77■□□□□ 0.12
PDLIM3-203ENST00000284771 BIN3Q9NQY0 253 aa15.77■□□□□ 0.12
PDLIM3-203ENST00000284771 GOLT1BQ9Y3E0 138 aa15.77■□□□□ 0.12
PDLIM3-203ENST00000284771 X6R8D5 127 aa15.77■□□□□ 0.12
PDLIM3-203ENST00000284771 IGHV1OR15-1A0A075B7D0 117 aa15.76■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms