RNA–Protein interactions for RNA: ENST00000266088.8

SLC5A1-201, Transcript of solute carrier family 5 member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SLC5A1, Length 5,061 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC5A1-201ENST00000266088 LAGE3Q14657 143 aa6.75□□□□□ -1.33
SLC5A1-201ENST00000266088 C11orf1Q9H5F2 150 aa6.75□□□□□ -1.33
SLC5A1-201ENST00000266088 C5orf30Q96GV9 206 aa6.74□□□□□ -1.33
SLC5A1-201ENST00000266088 C1orf159Q96HA4 380 aa6.74□□□□□ -1.33
SLC5A1-201ENST00000266088 LSM4Q9Y4Z0 139 aaKnown RBP6.74□□□□□ -1.33
SLC5A1-201ENST00000266088 SETD2Q9BYW2 2564 aaPredicted RBP6.74□□□□□ -1.33
SLC5A1-201ENST00000266088 C19orf84I3L1E1 186 aa6.74□□□□□ -1.33
SLC5A1-201ENST00000266088 DNAL4O96015 105 aa6.74□□□□□ -1.33
SLC5A1-201ENST00000266088 TMEM256Q8N2U0 113 aa6.74□□□□□ -1.33
SLC5A1-201ENST00000266088 ZNF491Q8N8L2 437 aa6.74□□□□□ -1.33
SLC5A1-201ENST00000266088 CSTL1Q9H114 145 aa6.74□□□□□ -1.33
SLC5A1-201ENST00000266088 MRPL16Q9NX20 251 aaKnown RBP6.74□□□□□ -1.33
SLC5A1-201ENST00000266088 KIAA1549Q9HCM3 1950 aa6.74□□□□□ -1.33
SLC5A1-201ENST00000266088 USP9XQ93008 2570 aaPredicted RBP6.74□□□□□ -1.33
SLC5A1-201ENST00000266088 C2CD3Q4AC94 2353 aa6.74□□□□□ -1.33
SLC5A1-201ENST00000266088 H3BRN7 92 aa6.74□□□□□ -1.33
SLC5A1-201ENST00000266088 VGLL1Q99990 258 aa6.74□□□□□ -1.33
SLC5A1-201ENST00000266088 CHTOPQ9Y3Y2 248 aaKnown RBP6.74□□□□□ -1.33
SLC5A1-201ENST00000266088 IGHV7-81A0A0B4J1V7 117 aa6.74□□□□□ -1.33
SLC5A1-201ENST00000266088 TYMSP04818 313 aa6.74□□□□□ -1.33
SLC5A1-201ENST00000266088 PFN1P07737 140 aaKnown RBP6.74□□□□□ -1.33
SLC5A1-201ENST00000266088 CKS1BP61024 79 aa6.74□□□□□ -1.33
SLC5A1-201ENST00000266088 CHCHD1Q96BP2 118 aaKnown RBP6.74□□□□□ -1.33
SLC5A1-201ENST00000266088 MS4A6AQ9H2W1 248 aa6.74□□□□□ -1.33
SLC5A1-201ENST00000266088 MRPL27Q9P0M9 148 aaKnown RBP6.74□□□□□ -1.33
SLC5A1-201ENST00000266088 A0A1B0GUS0 222 aa6.73□□□□□ -1.33
SLC5A1-201ENST00000266088 TMEM213A2RRL7 107 aa6.73□□□□□ -1.33
SLC5A1-201ENST00000266088 IGHV3-16A0A0C4DH30 117 aa6.73□□□□□ -1.33
SLC5A1-201ENST00000266088 IGHV7-4-1A0A0J9YVY3 117 aa6.73□□□□□ -1.33
SLC5A1-201ENST00000266088 VCYO14598 125 aa6.73□□□□□ -1.33
SLC5A1-201ENST00000266088 HOXD3P31249 432 aaPredicted RBP6.73□□□□□ -1.33
SLC5A1-201ENST00000266088 MRPS16Q9Y3D3 137 aaKnown RBP6.73□□□□□ -1.33
SLC5A1-201ENST00000266088 USP9YO00507 2555 aaPredicted RBP6.73□□□□□ -1.33
SLC5A1-201ENST00000266088 SFTA2Q6UW10 78 aa6.73□□□□□ -1.33
SLC5A1-201ENST00000266088 OR2K2Q8NGT1 345 aa6.73□□□□□ -1.33
SLC5A1-201ENST00000266088 C11orf68Q9H3H3 251 aaKnown RBP6.73□□□□□ -1.33
SLC5A1-201ENST00000266088 AMBPP02760 352 aa6.73□□□□□ -1.33
SLC5A1-201ENST00000266088 TMEM75Q8N9X5 138 aa6.73□□□□□ -1.33
SLC5A1-201ENST00000266088 PRR25Q96S07 402 aa6.73□□□□□ -1.33
SLC5A1-201ENST00000266088 CDH23Q9H251 3354 aa6.72□□□□□ -1.33
SLC5A1-201ENST00000266088 ASPHD1Q5U4P2 390 aa6.72□□□□□ -1.33
SLC5A1-201ENST00000266088 C17orf77Q96MU5 243 aa6.72□□□□□ -1.33
SLC5A1-201ENST00000266088 TRAV8-2A0A0B4J237 113 aa6.72□□□□□ -1.33
SLC5A1-201ENST00000266088 TRBV7-9A0A0J9YWB2 115 aa6.72□□□□□ -1.33
SLC5A1-201ENST00000266088 F6UB75 175 aa6.72□□□□□ -1.33
SLC5A1-201ENST00000266088 HLA-DMBP28068 263 aa6.72□□□□□ -1.33
SLC5A1-201ENST00000266088 OR5A1Q8NGJ0 315 aa6.72□□□□□ -1.33
SLC5A1-201ENST00000266088 PRUNE2Q8WUY3 3088 aa6.72□□□□□ -1.33
SLC5A1-201ENST00000266088 TNRC6AQ8NDV7 1962 aaKnown RBP6.72□□□□□ -1.33
SLC5A1-201ENST00000266088 EPG5Q9HCE0 2579 aa6.72□□□□□ -1.33
SLC5A1-201ENST00000266088 IGKCP01834 107 aa6.72□□□□□ -1.33
SLC5A1-201ENST00000266088 CDKN1BP46527 198 aa6.72□□□□□ -1.33
SLC5A1-201ENST00000266088 RASL11AQ6T310 242 aa6.72□□□□□ -1.33
SLC5A1-201ENST00000266088 THAP8Q8NA92 274 aa6.72□□□□□ -1.33
SLC5A1-201ENST00000266088 ABCA12Q86UK0 2595 aa6.72□□□□□ -1.33
SLC5A1-201ENST00000266088 F5H768 121 aa6.72□□□□□ -1.33
SLC5A1-201ENST00000266088 PRR20EP86478 221 aa6.72□□□□□ -1.33
SLC5A1-201ENST00000266088 PRR20CP86479 221 aa6.72□□□□□ -1.33
SLC5A1-201ENST00000266088 PRR20DP86480 221 aa6.72□□□□□ -1.33
SLC5A1-201ENST00000266088 PRR20BP86481 221 aa6.72□□□□□ -1.33
SLC5A1-201ENST00000266088 PRR20AP86496 221 aa6.72□□□□□ -1.33
SLC5A1-201ENST00000266088 MED12LQ86YW9 2145 aa6.72□□□□□ -1.33
SLC5A1-201ENST00000266088 Q8N7P7 452 aa6.72□□□□□ -1.33
SLC5A1-201ENST00000266088 PLA2G2EQ9NZK7 142 aa6.72□□□□□ -1.33
SLC5A1-201ENST00000266088 TRAV9-2A0A087WT02 112 aa6.71□□□□□ -1.33
SLC5A1-201ENST00000266088 TRAV13-1A0A0B4J241 112 aa6.71□□□□□ -1.33
SLC5A1-201ENST00000266088 ZNF815PA8K554 130 aa6.71□□□□□ -1.33
SLC5A1-201ENST00000266088 CCL24O00175 119 aa6.71□□□□□ -1.33
SLC5A1-201ENST00000266088 GAGE12BA1L429 117 aa6.71□□□□□ -1.34
SLC5A1-201ENST00000266088 GAGE7O76087 117 aa6.71□□□□□ -1.34
SLC5A1-201ENST00000266088 GAGE12FP0CL80 117 aa6.71□□□□□ -1.34
SLC5A1-201ENST00000266088 GAGE12GP0CL81 117 aa6.71□□□□□ -1.34
SLC5A1-201ENST00000266088 GAGE12IP0CL82 117 aa6.71□□□□□ -1.34
SLC5A1-201ENST00000266088 TMEM158Q8WZ71 300 aa6.71□□□□□ -1.34
SLC5A1-201ENST00000266088 IGHV1OR15-1A0A075B7D0 117 aa6.71□□□□□ -1.34
SLC5A1-201ENST00000266088 VWC2Q2TAL6 325 aa6.71□□□□□ -1.34
SLC5A1-201ENST00000266088 ANXA2RQ3ZCQ2 193 aa6.71□□□□□ -1.34
SLC5A1-201ENST00000266088 FXYD5Q96DB9 178 aa6.71□□□□□ -1.34
SLC5A1-201ENST00000266088 TMEM14CQ9P0S9 112 aa6.71□□□□□ -1.34
SLC5A1-201ENST00000266088 SMPXQ9UHP9 88 aa6.71□□□□□ -1.34
SLC5A1-201ENST00000266088 TSSC4Q9Y5U2 329 aaPredicted RBP6.71□□□□□ -1.34
SLC5A1-201ENST00000266088 TRAV2A0A0B4J234 112 aa6.71□□□□□ -1.34
SLC5A1-201ENST00000266088 GAGE12JA6NER3 117 aa6.71□□□□□ -1.34
SLC5A1-201ENST00000266088 EREGO14944 169 aa6.71□□□□□ -1.34
SLC5A1-201ENST00000266088 IGLV1-47P01700 117 aa6.71□□□□□ -1.34
SLC5A1-201ENST00000266088 GAGE1Q13065 139 aa6.71□□□□□ -1.34
SLC5A1-201ENST00000266088 GAGE4Q13068 117 aa6.71□□□□□ -1.34
SLC5A1-201ENST00000266088 GAGE5Q13069 117 aa6.71□□□□□ -1.34
SLC5A1-201ENST00000266088 GAGE13Q4V321 117 aa6.71□□□□□ -1.34
SLC5A1-201ENST00000266088 KMT2EQ8IZD2 1858 aa6.71□□□□□ -1.34
SLC5A1-201ENST00000266088 ZNF664Q8N3J9 261 aa6.71□□□□□ -1.34
SLC5A1-201ENST00000266088 H3BUA1 57 aa6.7□□□□□ -1.34
SLC5A1-201ENST00000266088 DAD1P61803 113 aa6.7□□□□□ -1.34
SLC5A1-201ENST00000266088 TEX43Q6ZNM6 134 aa6.7□□□□□ -1.34
SLC5A1-201ENST00000266088 Q8N9W7 124 aa6.7□□□□□ -1.34
SLC5A1-201ENST00000266088 MCRIP2Q9BUT9 160 aaKnown RBP6.7□□□□□ -1.34
SLC5A1-201ENST00000266088 SLURP1P55000 103 aa6.7□□□□□ -1.34
SLC5A1-201ENST00000266088 GAGE2BQ13066 116 aa6.7□□□□□ -1.34
SLC5A1-201ENST00000266088 GAGE2EQ4V326 116 aa6.7□□□□□ -1.34
SLC5A1-201ENST00000266088 ZNF114Q8NC26 417 aa6.7□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 40.3 ms