RNA–Protein interactions for RNA: ENST00000263741.11

SDF4-201, Transcript of stromal cell derived factor 4, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SDF4, Length 2,079 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDF4-201ENST00000263741 JOSD1Q15040 202 aaPredicted RBP13.52□□□□□ -0.25
SDF4-201ENST00000263741 CDPF1Q6NVV7 123 aa13.52□□□□□ -0.25
SDF4-201ENST00000263741 TMEM18Q96B42 140 aa13.52□□□□□ -0.25
SDF4-201ENST00000263741 FXYD5Q96DB9 178 aa13.52□□□□□ -0.25
SDF4-201ENST00000263741 UBE2L3P68036 154 aaKnown RBP13.51□□□□□ -0.25
SDF4-201ENST00000263741 RETNQ9HD89 108 aa13.51□□□□□ -0.25
SDF4-201ENST00000263741 ZNF331Q9NQX6 463 aaPredicted RBP13.51□□□□□ -0.25
SDF4-201ENST00000263741 GCGP01275 180 aa13.51□□□□□ -0.25
SDF4-201ENST00000263741 IGKV3-20P01619 116 aa13.51□□□□□ -0.25
SDF4-201ENST00000263741 ZNF705DP0CH99 300 aaPredicted RBP13.51□□□□□ -0.25
SDF4-201ENST00000263741 ZNF705BP0CI00 300 aaPredicted RBP13.51□□□□□ -0.25
SDF4-201ENST00000263741 STHQ8IWL8 128 aa13.51□□□□□ -0.25
SDF4-201ENST00000263741 ZNF738Q8NE65 137 aa13.51□□□□□ -0.25
SDF4-201ENST00000263741 SFRP2Q96HF1 295 aa13.51□□□□□ -0.25
SDF4-201ENST00000263741 TRBV19A0A075B6N1 114 aa13.5□□□□□ -0.25
SDF4-201ENST00000263741 HIST1H1EP10412 219 aaKnown RBP13.5□□□□□ -0.25
SDF4-201ENST00000263741 HUWE1Q7Z6Z7 4374 aaKnown RBP13.5□□□□□ -0.25
SDF4-201ENST00000263741 ZNF705FA8MVS1 300 aaPredicted RBP13.49□□□□□ -0.25
SDF4-201ENST00000263741 CNN1P51911 297 aaKnown RBP13.49□□□□□ -0.25
SDF4-201ENST00000263741 TAS2R45P59539 299 aa13.49□□□□□ -0.25
SDF4-201ENST00000263741 SAMD13Q5VXD3 122 aa13.49□□□□□ -0.25
SDF4-201ENST00000263741 ARL2-SNX15V9GYD0 113 aa13.49□□□□□ -0.25
SDF4-201ENST00000263741 TRAV9-1A0A075B6T8 112 aa13.49□□□□□ -0.25
SDF4-201ENST00000263741 DDTP30046 118 aa13.49□□□□□ -0.25
SDF4-201ENST00000263741 GCHFRP30047 84 aa13.49□□□□□ -0.25
SDF4-201ENST00000263741 TRPT1Q86TN4 253 aaKnown RBP13.49□□□□□ -0.25
SDF4-201ENST00000263741 SLC50A1Q9BRV3 221 aa13.49□□□□□ -0.25
SDF4-201ENST00000263741 TRAPPC1Q9Y5R8 145 aa13.49□□□□□ -0.25
SDF4-201ENST00000263741 NBEAP1P0C6P0 100 aa13.48□□□□□ -0.25
SDF4-201ENST00000263741 EXOC3-AS1Q8N2X6 119 aa13.48□□□□□ -0.25
SDF4-201ENST00000263741 M0R3E3 92 aa13.48□□□□□ -0.25
SDF4-201ENST00000263741 PSG3Q16557 428 aa13.48□□□□□ -0.25
SDF4-201ENST00000263741 SCO2A0A1W2PP80 73 aa13.47□□□□□ -0.25
SDF4-201ENST00000263741 HLA-DRB4P13762 266 aa13.47□□□□□ -0.25
SDF4-201ENST00000263741 FOXI2Q6ZQN5 318 aa13.47□□□□□ -0.25
SDF4-201ENST00000263741 OR4B1Q8NGF8 309 aa13.47□□□□□ -0.25
SDF4-201ENST00000263741 OR10G8Q8NGN5 311 aa13.47□□□□□ -0.25
SDF4-201ENST00000263741 DERL1Q9BUN8 251 aa13.47□□□□□ -0.25
SDF4-201ENST00000263741 LY96Q9Y6Y9 160 aa13.47□□□□□ -0.25
SDF4-201ENST00000263741 HLA-DRB4X5D2U9 266 aa13.47□□□□□ -0.25
SDF4-201ENST00000263741 STAB2Q8WWQ8 2551 aa13.47□□□□□ -0.25
SDF4-201ENST00000263741 PRAC2D3DTV9 90 aa13.46□□□□□ -0.25
SDF4-201ENST00000263741 H3BMM0 161 aa13.46□□□□□ -0.25
SDF4-201ENST00000263741 GZMBP10144 247 aa13.46□□□□□ -0.25
SDF4-201ENST00000263741 C11orf52Q96A22 123 aa13.46□□□□□ -0.25
SDF4-201ENST00000263741 A0A0J9YX75 114 aa13.46□□□□□ -0.26
SDF4-201ENST00000263741 C9JCJ5 164 aa13.46□□□□□ -0.26
SDF4-201ENST00000263741 FXYD7P58549 80 aa13.46□□□□□ -0.26
SDF4-201ENST00000263741 DEFB135Q30KP9 77 aa13.46□□□□□ -0.26
SDF4-201ENST00000263741 TMEM167BQ9NRX6 74 aa13.46□□□□□ -0.26
SDF4-201ENST00000263741 RPL19P84098 196 aaKnown RBP13.45□□□□□ -0.26
SDF4-201ENST00000263741 EBLN2Q6P2I7 272 aa13.45□□□□□ -0.26
SDF4-201ENST00000263741 PQLC2Q6ZP29 291 aa13.45□□□□□ -0.26
SDF4-201ENST00000263741 CA1P00915 261 aaPredicted RBP13.44□□□□□ -0.26
SDF4-201ENST00000263741 APOC4P55056 127 aa13.44□□□□□ -0.26
SDF4-201ENST00000263741 RANP62826 216 aaKnown RBP13.44□□□□□ -0.26
SDF4-201ENST00000263741 HIST1H1AQ02539 215 aaPredicted RBP13.44□□□□□ -0.26
SDF4-201ENST00000263741 IQCJQ1A5X6 159 aa13.44□□□□□ -0.26
SDF4-201ENST00000263741 TM2D3Q9BRN9 247 aa13.44□□□□□ -0.26
SDF4-201ENST00000263741 YTHDF2Q9Y5A9 579 aaKnown RBP13.44□□□□□ -0.26
SDF4-201ENST00000263741 ZNF253O75346 499 aa13.44□□□□□ -0.26
SDF4-201ENST00000263741 PDE6HQ13956 83 aa13.44□□□□□ -0.26
SDF4-201ENST00000263741 C14orf144Q96I85 54 aa13.44□□□□□ -0.26
SDF4-201ENST00000263741 PRO1933Q9H354 126 aa13.44□□□□□ -0.26
SDF4-201ENST00000263741 GIG44P09565 113 aaPredicted RBP13.43□□□□□ -0.26
SDF4-201ENST00000263741 OR8A1Q8NGG7 326 aa13.43□□□□□ -0.26
SDF4-201ENST00000263741 CSTL1Q9H114 145 aa13.43□□□□□ -0.26
SDF4-201ENST00000263741 Q9H3A6 140 aa13.43□□□□□ -0.26
SDF4-201ENST00000263741 CLEC5AQ9NY25 188 aa13.43□□□□□ -0.26
SDF4-201ENST00000263741 ZNF705GA8MUZ8 300 aaPredicted RBP13.43□□□□□ -0.26
SDF4-201ENST00000263741 PSG9Q00887 426 aa13.43□□□□□ -0.26
SDF4-201ENST00000263741 AAMDCQ9H7C9 122 aa13.43□□□□□ -0.26
SDF4-201ENST00000263741 IL36BQ9NZH7 164 aa13.43□□□□□ -0.26
SDF4-201ENST00000263741 TRBV20OR9-2A0A075B6H5 130 aa13.42□□□□□ -0.26
SDF4-201ENST00000263741 KIR2DL5BA0A0G2JN68 375 aa13.42□□□□□ -0.26
SDF4-201ENST00000263741 KIR2DL5BA0A0G2JPC4 375 aa13.42□□□□□ -0.26
SDF4-201ENST00000263741 PGPEP1LA6NFU8 196 aa13.42□□□□□ -0.26
SDF4-201ENST00000263741 LBHQ53QV2 105 aaPredicted RBP13.42□□□□□ -0.26
SDF4-201ENST00000263741 KIR2DL5AQ8N109 375 aa13.42□□□□□ -0.26
SDF4-201ENST00000263741 KIR2DL5BQ8NHK3 375 aa13.42□□□□□ -0.26
SDF4-201ENST00000263741 OCC1Q8TAD7 63 aa13.41□□□□□ -0.26
SDF4-201ENST00000263741 SPATA25Q9BR10 227 aa13.41□□□□□ -0.26
SDF4-201ENST00000263741 XCL2Q9UBD3 114 aa13.41□□□□□ -0.26
SDF4-201ENST00000263741 IGKV2-40A0A087WW87 121 aaPredicted RBP13.4□□□□□ -0.26
SDF4-201ENST00000263741 IGKV2D-40P01614 121 aaPredicted RBP13.4□□□□□ -0.26
SDF4-201ENST00000263741 RPH3ALQ9UNE2 315 aa13.4□□□□□ -0.26
SDF4-201ENST00000263741 GNG4P50150 75 aa13.4□□□□□ -0.27
SDF4-201ENST00000263741 AMTNQ6UX39 209 aa13.4□□□□□ -0.27
SDF4-201ENST00000263741 RCHY1Q96PM5 261 aa13.4□□□□□ -0.27
SDF4-201ENST00000263741 ZMAT4Q9H898 229 aa13.4□□□□□ -0.27
SDF4-201ENST00000263741 M0R2Z0 102 aa13.39□□□□□ -0.27
SDF4-201ENST00000263741 ERCC8Q13216 396 aa13.39□□□□□ -0.27
SDF4-201ENST00000263741 OVOL2Q9BRP0 275 aa13.39□□□□□ -0.27
SDF4-201ENST00000263741 NHLRC4P0CG21 123 aaPredicted RBP13.38□□□□□ -0.27
SDF4-201ENST00000263741 SPINK13Q1W4C9 94 aa13.38□□□□□ -0.27
SDF4-201ENST00000263741 CMTM2Q8TAZ6 248 aa13.38□□□□□ -0.27
SDF4-201ENST00000263741 ERVFC1-1P60608 527 aa13.38□□□□□ -0.27
SDF4-201ENST00000263741 GNG5P63218 68 aa13.38□□□□□ -0.27
SDF4-201ENST00000263741 COX19Q49B96 90 aa13.38□□□□□ -0.27
SDF4-201ENST00000263741 MORN3Q6PF18 240 aaPredicted RBP13.38□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms