RNA–Protein interactions for RNA: ENST00000263511.8

CROCCP3-201, Transcript of ciliary rootlet coiled-coil, rootletin pseudogene 3, humanhuman

TSL 1 (best) BASIC

Gene CROCCP3, Length 5,368 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CROCCP3-201ENST00000263511 SLAQ13239 276 aa13.34□□□□□ -0.27
CROCCP3-201ENST00000263511 IGHV3-38A0A0C4DH36 116 aa13.34□□□□□ -0.27
CROCCP3-201ENST00000263511 SRSF2Q01130 221 aaKnown RBP13.34□□□□□ -0.27
CROCCP3-201ENST00000263511 KIR3DS1Q14943 382 aa13.34□□□□□ -0.27
CROCCP3-201ENST00000263511 MRPL51Q4U2R6 128 aaKnown RBP13.34□□□□□ -0.27
CROCCP3-201ENST00000263511 FOXI2Q6ZQN5 318 aa13.34□□□□□ -0.27
CROCCP3-201ENST00000263511 WDR81Q562E7 1941 aa13.34□□□□□ -0.27
CROCCP3-201ENST00000263511 STPG4Q8N801 248 aa13.33□□□□□ -0.27
CROCCP3-201ENST00000263511 MALRD1Q5VYJ5 2156 aa13.33□□□□□ -0.28
CROCCP3-201ENST00000263511 ZNF491Q8N8L2 437 aa13.33□□□□□ -0.28
CROCCP3-201ENST00000263511 GTSF1LQ9H1H1 148 aa13.33□□□□□ -0.28
CROCCP3-201ENST00000263511 CD5LO43866 347 aa13.33□□□□□ -0.28
CROCCP3-201ENST00000263511 HLA-DRB4P13762 266 aa13.33□□□□□ -0.28
CROCCP3-201ENST00000263511 PFN2P35080 140 aa13.33□□□□□ -0.28
CROCCP3-201ENST00000263511 HLA-DRB4X5D2U9 266 aa13.33□□□□□ -0.28
CROCCP3-201ENST00000263511 FAM208BQ5VWN6 2430 aa13.33□□□□□ -0.28
CROCCP3-201ENST00000263511 PRSS57Q6UWY2 283 aa13.33□□□□□ -0.28
CROCCP3-201ENST00000263511 OR11H6Q8NGC7 330 aa13.33□□□□□ -0.28
CROCCP3-201ENST00000263511 VOPP1Q96AW1 172 aa13.33□□□□□ -0.28
CROCCP3-201ENST00000263511 ZNF726P1Q15940 193 aa13.32□□□□□ -0.28
CROCCP3-201ENST00000263511 MED13LQ71F56 2210 aa13.32□□□□□ -0.28
CROCCP3-201ENST00000263511 HOXD3P31249 432 aaPredicted RBP13.32□□□□□ -0.28
CROCCP3-201ENST00000263511 KLF2Q9Y5W3 355 aaPredicted RBP13.32□□□□□ -0.28
CROCCP3-201ENST00000263511 IGHV4-61A0A0C4DH41 118 aa13.32□□□□□ -0.28
CROCCP3-201ENST00000263511 CCL24O00175 119 aa13.32□□□□□ -0.28
CROCCP3-201ENST00000263511 GAGE2BQ13066 116 aa13.32□□□□□ -0.28
CROCCP3-201ENST00000263511 GAGE2EQ4V326 116 aa13.32□□□□□ -0.28
CROCCP3-201ENST00000263511 GAGE2DQ9UEU5 116 aa13.32□□□□□ -0.28
CROCCP3-201ENST00000263511 GTF3C1Q12789 2109 aa13.32□□□□□ -0.28
CROCCP3-201ENST00000263511 ZFHX2Q9C0A1 2572 aaPredicted RBP13.32□□□□□ -0.28
CROCCP3-201ENST00000263511 FXYD5Q96DB9 178 aa13.31□□□□□ -0.28
CROCCP3-201ENST00000263511 CENPVL3A0A0U1RRI6 287 aa13.31□□□□□ -0.28
CROCCP3-201ENST00000263511 IGF2BP2-AS1Q96M15 143 aa13.31□□□□□ -0.28
CROCCP3-201ENST00000263511 HEATR5AQ86XA9 2040 aa13.31□□□□□ -0.28
CROCCP3-201ENST00000263511 TRAV26-2A0A0B4J265 109 aa13.31□□□□□ -0.28
CROCCP3-201ENST00000263511 NPSP0C0P6 89 aa13.31□□□□□ -0.28
CROCCP3-201ENST00000263511 C11orf53Q8IXP5 236 aa13.31□□□□□ -0.28
CROCCP3-201ENST00000263511 TSC2P49815 1807 aa13.31□□□□□ -0.28
CROCCP3-201ENST00000263511 CGB3P0DN86 165 aa13.31□□□□□ -0.28
CROCCP3-201ENST00000263511 ZFAND6Q6FIF0 208 aa13.3□□□□□ -0.28
CROCCP3-201ENST00000263511 Q8NFD4 153 aa13.3□□□□□ -0.28
CROCCP3-201ENST00000263511 IGLC7A0M8Q6 106 aa13.3□□□□□ -0.28
CROCCP3-201ENST00000263511 ZC2HC1AQ96GY0 325 aa13.3□□□□□ -0.28
CROCCP3-201ENST00000263511 V9GYV3 84 aa13.3□□□□□ -0.28
CROCCP3-201ENST00000263511 MRPL53Q96EL3 112 aaKnown RBP13.3□□□□□ -0.28
CROCCP3-201ENST00000263511 TMEM126AQ9H061 195 aa13.3□□□□□ -0.28
CROCCP3-201ENST00000263511 MUC6Q6W4X9 2439 aa13.3□□□□□ -0.28
CROCCP3-201ENST00000263511 TANC1Q9C0D5 1861 aa13.29□□□□□ -0.28
CROCCP3-201ENST00000263511 OCIAD2Q56VL3 154 aa13.29□□□□□ -0.28
CROCCP3-201ENST00000263511 SMIM2Q9BVW6 85 aa13.29□□□□□ -0.28
CROCCP3-201ENST00000263511 PCNX2A6NKB5 2137 aa13.29□□□□□ -0.28
CROCCP3-201ENST00000263511 IGHV4-30-2A0A087WSY4 118 aa13.29□□□□□ -0.28
CROCCP3-201ENST00000263511 RHOHQ15669 191 aa13.29□□□□□ -0.28
CROCCP3-201ENST00000263511 A0A1B0GUS0 222 aa13.29□□□□□ -0.28
CROCCP3-201ENST00000263511 ANGP03950 147 aaKnown RBP13.29□□□□□ -0.28
CROCCP3-201ENST00000263511 SMIM27A0A1W2PRY6 76 aa13.28□□□□□ -0.28
CROCCP3-201ENST00000263511 FOXE3Q13461 319 aa13.28□□□□□ -0.28
CROCCP3-201ENST00000263511 PRB1P04280 392 aa13.28□□□□□ -0.28
CROCCP3-201ENST00000263511 PRR20EP86478 221 aa13.28□□□□□ -0.28
CROCCP3-201ENST00000263511 PRR20CP86479 221 aa13.28□□□□□ -0.28
CROCCP3-201ENST00000263511 PRR20DP86480 221 aa13.28□□□□□ -0.28
CROCCP3-201ENST00000263511 PRR20BP86481 221 aa13.28□□□□□ -0.28
CROCCP3-201ENST00000263511 PRR20AP86496 221 aa13.28□□□□□ -0.28
CROCCP3-201ENST00000263511 C11orf52Q96A22 123 aa13.28□□□□□ -0.28
CROCCP3-201ENST00000263511 ZGRF1Q86YA3 2104 aa13.28□□□□□ -0.28
CROCCP3-201ENST00000263511 LHBP01229 141 aa13.27□□□□□ -0.28
CROCCP3-201ENST00000263511 DKK4Q9UBT3 224 aa13.27□□□□□ -0.28
CROCCP3-201ENST00000263511 NLRC5Q86WI3 1866 aa13.27□□□□□ -0.28
CROCCP3-201ENST00000263511 A0A096LPF7 62 aa13.27□□□□□ -0.28
CROCCP3-201ENST00000263511 KLF5Q13887 457 aaPredicted RBP13.27□□□□□ -0.28
CROCCP3-201ENST00000263511 PYGO2Q9BRQ0 406 aa13.27□□□□□ -0.28
CROCCP3-201ENST00000263511 IGHV1-24A0A0C4DH33 117 aa13.27□□□□□ -0.29
CROCCP3-201ENST00000263511 NXPH4O95158 308 aa13.27□□□□□ -0.29
CROCCP3-201ENST00000263511 C9JAW5 83 aa13.27□□□□□ -0.29
CROCCP3-201ENST00000263511 RPL32P62910 135 aaKnown RBP13.27□□□□□ -0.29
CROCCP3-201ENST00000263511 PLXNA2O75051 1894 aa13.27□□□□□ -0.29
CROCCP3-201ENST00000263511 BDP1A6H8Y1 2624 aa13.26□□□□□ -0.29
CROCCP3-201ENST00000263511 GAGE2AQ6NT46 116 aa13.26□□□□□ -0.29
CROCCP3-201ENST00000263511 C20orf78Q9BR46 151 aa13.26□□□□□ -0.29
CROCCP3-201ENST00000263511 NDUFA12Q9UI09 145 aa13.26□□□□□ -0.29
CROCCP3-201ENST00000263511 CGB7P0DN87 165 aa13.26□□□□□ -0.29
CROCCP3-201ENST00000263511 C9orf66Q5T8R8 295 aa13.26□□□□□ -0.29
CROCCP3-201ENST00000263511 ZNF48Q96MX3 618 aaPredicted RBP13.26□□□□□ -0.29
CROCCP3-201ENST00000263511 TTC28Q96AY4 2481 aa13.26□□□□□ -0.29
CROCCP3-201ENST00000263511 RNF138Q8WVD3 245 aa13.26□□□□□ -0.29
CROCCP3-201ENST00000263511 LENEPQ9Y5L5 61 aa13.26□□□□□ -0.29
CROCCP3-201ENST00000263511 IGHV4-38-2P0DP08 117 aa13.26□□□□□ -0.29
CROCCP3-201ENST00000263511 HERVK_113P63121 156 aa13.26□□□□□ -0.29
CROCCP3-201ENST00000263511 NOP10Q9NPE3 64 aaKnown RBP13.26□□□□□ -0.29
CROCCP3-201ENST00000263511 PRSS29PA6NIE9 313 aa13.25□□□□□ -0.29
CROCCP3-201ENST00000263511 DEFB136Q30KP8 78 aa13.25□□□□□ -0.29
CROCCP3-201ENST00000263511 HELZP42694 1942 aaKnown RBP13.25□□□□□ -0.29
CROCCP3-201ENST00000263511 MRAPQ8TCY5 172 aa13.25□□□□□ -0.29
CROCCP3-201ENST00000263511 F6UB75 175 aa13.25□□□□□ -0.29
CROCCP3-201ENST00000263511 NPYP01303 97 aa13.25□□□□□ -0.29
CROCCP3-201ENST00000263511 C10orf105Q8TEF2 133 aa13.25□□□□□ -0.29
CROCCP3-201ENST00000263511 SIGLEC8Q9NYZ4 499 aa13.25□□□□□ -0.29
CROCCP3-201ENST00000263511 H3BMM0 161 aa13.24□□□□□ -0.29
CROCCP3-201ENST00000263511 IGLC2P0DOY2 106 aa13.24□□□□□ -0.29
CROCCP3-201ENST00000263511 IGLC3P0DOY3 106 aa13.24□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 464.8 ms