RNA–Protein interactions for RNA: ENST00000260795.6

FGFR3-201, Transcript of fibroblast growth factor receptor 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene FGFR3, Length 4,132 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FGFR3-201ENST00000260795 KIR2DL4Q99706 377 aa11.32□□□□□ -0.6
FGFR3-201ENST00000260795 SIGLEC8Q9NYZ4 499 aa11.32□□□□□ -0.6
FGFR3-201ENST00000260795 IGKCP01834 107 aa11.32□□□□□ -0.6
FGFR3-201ENST00000260795 UBE2E1P51965 193 aa11.32□□□□□ -0.6
FGFR3-201ENST00000260795 C14orf178Q8N769 122 aaPredicted RBP11.32□□□□□ -0.6
FGFR3-201ENST00000260795 IGHV2-70DA0A0C4DH43 119 aa11.31□□□□□ -0.6
FGFR3-201ENST00000260795 NPYP01303 97 aa11.31□□□□□ -0.6
FGFR3-201ENST00000260795 IGLV2-23P01705 113 aa11.31□□□□□ -0.6
FGFR3-201ENST00000260795 ZFP36P26651 326 aaKnown RBP11.31□□□□□ -0.6
FGFR3-201ENST00000260795 EMP1P54849 157 aa11.31□□□□□ -0.6
FGFR3-201ENST00000260795 GDF5OSQ5U4N7 250 aa11.31□□□□□ -0.6
FGFR3-201ENST00000260795 OR4X2Q8NGF9 303 aa11.31□□□□□ -0.6
FGFR3-201ENST00000260795 RNF114Q9Y508 228 aa11.31□□□□□ -0.6
FGFR3-201ENST00000260795 TMEM95Q3KNT9 176 aa11.31□□□□□ -0.6
FGFR3-201ENST00000260795 SIGLEC15Q6ZMC9 328 aa11.31□□□□□ -0.6
FGFR3-201ENST00000260795 SMIM12Q96EX1 92 aa11.31□□□□□ -0.6
FGFR3-201ENST00000260795 TRAV26-2A0A0B4J265 109 aa11.31□□□□□ -0.6
FGFR3-201ENST00000260795 H3BRN7 92 aa11.31□□□□□ -0.6
FGFR3-201ENST00000260795 IGHV4-39P01824 125 aa11.31□□□□□ -0.6
FGFR3-201ENST00000260795 CD7P09564 240 aa11.31□□□□□ -0.6
FGFR3-201ENST00000260795 SNRPD3P62318 126 aaKnown RBP11.31□□□□□ -0.6
FGFR3-201ENST00000260795 GAGE12BA1L429 117 aa11.3□□□□□ -0.6
FGFR3-201ENST00000260795 CIDEAO60543 219 aa11.3□□□□□ -0.6
FGFR3-201ENST00000260795 C1orf159Q96HA4 380 aa11.3□□□□□ -0.6
FGFR3-201ENST00000260795 FAM231BA6NCW3 169 aa11.3□□□□□ -0.6
FGFR3-201ENST00000260795 K7EIM0 57 aa11.3□□□□□ -0.6
FGFR3-201ENST00000260795 KIR3DS1Q14943 382 aa11.3□□□□□ -0.6
FGFR3-201ENST00000260795 HIST2H2BCQ6DN03 193 aa11.3□□□□□ -0.6
FGFR3-201ENST00000260795 MSRB1Q9NZV6 116 aa11.3□□□□□ -0.6
FGFR3-201ENST00000260795 TNFRSF6BO95407 300 aa11.3□□□□□ -0.6
FGFR3-201ENST00000260795 PF4P02776 101 aa11.3□□□□□ -0.6
FGFR3-201ENST00000260795 CD300EQ496F6 205 aaPredicted RBP11.3□□□□□ -0.6
FGFR3-201ENST00000260795 MRPL16Q9NX20 251 aaKnown RBP11.3□□□□□ -0.6
FGFR3-201ENST00000260795 IGHV1-69DA0A0B4J2H0 117 aa11.29□□□□□ -0.6
FGFR3-201ENST00000260795 IGHV1-69P01742 117 aa11.29□□□□□ -0.6
FGFR3-201ENST00000260795 NSUN5P1Q3KNT7 163 aa11.29□□□□□ -0.6
FGFR3-201ENST00000260795 ZNF418Q8TF45 676 aaPredicted RBP11.29□□□□□ -0.6
FGFR3-201ENST00000260795 SEC11AP67812 179 aa11.29□□□□□ -0.6
FGFR3-201ENST00000260795 SRSF1Q07955 248 aaKnown RBP eCLIP11.29□□□□□ -0.63e-8■□□□□ 10
FGFR3-201ENST00000260795 HSD52Q0P140 79 aa11.29□□□□□ -0.6
FGFR3-201ENST00000260795 PSMG4Q5JS54 123 aa11.29□□□□□ -0.6
FGFR3-201ENST00000260795 GATA1P15976 413 aaPredicted RBP11.29□□□□□ -0.6
FGFR3-201ENST00000260795 MYO15AQ9UKN7 3530 aa11.29□□□□□ -0.6
FGFR3-201ENST00000260795 TNRC6BQ9UPQ9 1833 aaKnown RBP11.29□□□□□ -0.6
FGFR3-201ENST00000260795 IGHV4-38-2P0DP08 117 aa11.28□□□□□ -0.6
FGFR3-201ENST00000260795 EGR2P11161 476 aaPredicted RBP11.28□□□□□ -0.6
FGFR3-201ENST00000260795 PDE6HQ13956 83 aa11.28□□□□□ -0.6
FGFR3-201ENST00000260795 I3L2K1 104 aa11.28□□□□□ -0.6
FGFR3-201ENST00000260795 MRPL52Q86TS9 123 aaKnown RBP11.28□□□□□ -0.6
FGFR3-201ENST00000260795 WIPF2Q8TF74 440 aaPredicted RBP11.28□□□□□ -0.6
FGFR3-201ENST00000260795 BOD1L1Q8NFC6 3051 aa11.28□□□□□ -0.6
FGFR3-201ENST00000260795 A0A1B0GWB2 263 aa11.28□□□□□ -0.6
FGFR3-201ENST00000260795 SYNJ2BPP57105 145 aa11.28□□□□□ -0.6
FGFR3-201ENST00000260795 PIP4P2Q8N4L2 257 aa11.28□□□□□ -0.6
FGFR3-201ENST00000260795 TMEM14CQ9P0S9 112 aa11.28□□□□□ -0.6
FGFR3-201ENST00000260795 CCL25O15444 150 aa11.28□□□□□ -0.6
FGFR3-201ENST00000260795 BLCAPP62952 87 aa11.28□□□□□ -0.6
FGFR3-201ENST00000260795 CYSLTR1Q9Y271 337 aa11.28□□□□□ -0.6
FGFR3-201ENST00000260795 PSMB11A5LHX3 300 aa11.27□□□□□ -0.6
FGFR3-201ENST00000260795 FCN3O75636 299 aa11.27□□□□□ -0.6
FGFR3-201ENST00000260795 SAMD5Q5TGI4 173 aa11.27□□□□□ -0.6
FGFR3-201ENST00000260795 DUX3Q96PT4 197 aa11.27□□□□□ -0.6
FGFR3-201ENST00000260795 ZNF747Q9BV97 191 aa11.27□□□□□ -0.6
FGFR3-201ENST00000260795 DKK2Q9UBU2 259 aa11.27□□□□□ -0.6
FGFR3-201ENST00000260795 TRAV21A0A0B4J279 112 aa11.27□□□□□ -0.61
FGFR3-201ENST00000260795 TMEM238LA0A1B0GVL6 79 aa11.27□□□□□ -0.61
FGFR3-201ENST00000260795 A6NJY4 79 aa11.27□□□□□ -0.61
FGFR3-201ENST00000260795 CD5LO43866 347 aa11.27□□□□□ -0.61
FGFR3-201ENST00000260795 IGKV3OR2-268A0A0C4DH90 116 aa11.27□□□□□ -0.61
FGFR3-201ENST00000260795 IGLV1-47P01700 117 aa11.27□□□□□ -0.61
FGFR3-201ENST00000260795 IGHV3-64A0A075B6Q5 118 aa11.26□□□□□ -0.61
FGFR3-201ENST00000260795 LAGE3Q14657 143 aa11.26□□□□□ -0.61
FGFR3-201ENST00000260795 MTURNQ8N3F0 131 aa11.26□□□□□ -0.61
FGFR3-201ENST00000260795 TEX22C9J3V5 150 aa11.26□□□□□ -0.61
FGFR3-201ENST00000260795 LGALS3P17931 250 aaKnown RBP11.26□□□□□ -0.61
FGFR3-201ENST00000260795 KLF5Q13887 457 aaPredicted RBP11.26□□□□□ -0.61
FGFR3-201ENST00000260795 BVES-AS1Q5T3Y7 98 aa11.26□□□□□ -0.61
FGFR3-201ENST00000260795 LINC01356Q8N9X3 169 aa11.26□□□□□ -0.61
FGFR3-201ENST00000260795 OOSP1A8MZH6 123 aa11.26□□□□□ -0.61
FGFR3-201ENST00000260795 IGHV4-59P01825 116 aa11.25□□□□□ -0.61
FGFR3-201ENST00000260795 OR9G4Q8NGQ1 327 aa11.25□□□□□ -0.61
FGFR3-201ENST00000260795 DYNAPQ8N1N2 210 aa11.25□□□□□ -0.61
FGFR3-201ENST00000260795 COL5A1P20908 1838 aaPredicted RBP11.25□□□□□ -0.61
FGFR3-201ENST00000260795 ESDP10768 282 aa11.25□□□□□ -0.61
FGFR3-201ENST00000260795 LYRM7Q5U5X0 104 aa11.25□□□□□ -0.61
FGFR3-201ENST00000260795 TTTY13Q9BZ97 58 aa11.25□□□□□ -0.61
FGFR3-201ENST00000260795 ANKRD17O75179 2603 aaKnown RBP11.24□□□□□ -0.61
FGFR3-201ENST00000260795 PCP2Q8IVA1 136 aa11.24□□□□□ -0.61
FGFR3-201ENST00000260795 SYT8Q8NBV8 401 aa11.24□□□□□ -0.61
FGFR3-201ENST00000260795 RHPN1-AS1Q9BWJ2 59 aa11.24□□□□□ -0.61
FGFR3-201ENST00000260795 CHTOPQ9Y3Y2 248 aaKnown RBP11.24□□□□□ -0.61
FGFR3-201ENST00000260795 TMEM8BA6NDV4 472 aa11.24□□□□□ -0.61
FGFR3-201ENST00000260795 ANKRD39Q53RE8 183 aa11.24□□□□□ -0.61
FGFR3-201ENST00000260795 C1orf122Q6ZSJ8 110 aa11.24□□□□□ -0.61
FGFR3-201ENST00000260795 ZNF479Q96JC4 524 aa11.24□□□□□ -0.61
FGFR3-201ENST00000260795 SRSF8Q9BRL6 282 aaKnown RBP11.24□□□□□ -0.61
FGFR3-201ENST00000260795 CST9LQ9H4G1 147 aa11.24□□□□□ -0.61
FGFR3-201ENST00000260795 A0A087WWL8 130 aa11.24□□□□□ -0.61
FGFR3-201ENST00000260795 TRAV12-3A0A0B4J271 114 aa11.24□□□□□ -0.61
FGFR3-201ENST00000260795 ZNF815PA8K554 130 aa11.24□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 57.3 ms