RNA–Protein interactions for RNA: ENST00000259043.11

TRA2B-201, Transcript of transformer 2 beta homolog, humanhuman

TSL 3

Gene TRA2B, Length 943 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRA2B-201ENST00000259043 TNFSF18Q9UNG2 199 aa2.86□□□□□ -1.95
TRA2B-201ENST00000259043 LSM5Q9Y4Y9 91 aaKnown RBP2.86□□□□□ -1.95
TRA2B-201ENST00000259043 IGHV3-43A0A0B4J1X8 118 aa2.85□□□□□ -1.95
TRA2B-201ENST00000259043 IGKV1-6A0A0C4DH72 117 aa2.85□□□□□ -1.95
TRA2B-201ENST00000259043 DUXBA0A1W2PPF3 345 aa2.85□□□□□ -1.95
TRA2B-201ENST00000259043 C17orf98A8MV24 154 aa2.85□□□□□ -1.95
TRA2B-201ENST00000259043 NDUFC2-KCTD14E9PQ53 114 aa2.85□□□□□ -1.95
TRA2B-201ENST00000259043 H0Y980 276 aa2.85□□□□□ -1.95
TRA2B-201ENST00000259043 K7EPK0 472 aa2.85□□□□□ -1.95
TRA2B-201ENST00000259043 M0QZK8 103 aa2.85□□□□□ -1.95
TRA2B-201ENST00000259043 SNAI2O43623 268 aa2.85□□□□□ -1.95
TRA2B-201ENST00000259043 PGLYRP1O75594 196 aaPredicted RBP2.85□□□□□ -1.95
TRA2B-201ENST00000259043 HLA-DQA1P01909 254 aa2.85□□□□□ -1.95
TRA2B-201ENST00000259043 RBP4P02753 201 aa2.85□□□□□ -1.95
TRA2B-201ENST00000259043 CD24P25063 80 aa2.85□□□□□ -1.95
TRA2B-201ENST00000259043 PPP1CCP36873 323 aaKnown RBP2.85□□□□□ -1.95
TRA2B-201ENST00000259043 GNG10P50151 68 aa2.85□□□□□ -1.95
TRA2B-201ENST00000259043 KRTAP10-10P60014 251 aa2.85□□□□□ -1.95
TRA2B-201ENST00000259043 EIF5AP63241 154 aaKnown RBP2.85□□□□□ -1.95
TRA2B-201ENST00000259043 SYCNQ0VAF6 134 aa2.85□□□□□ -1.95
TRA2B-201ENST00000259043 OR2F1Q13607 317 aa2.85□□□□□ -1.95
TRA2B-201ENST00000259043 EBI3Q14213 229 aa2.85□□□□□ -1.95
TRA2B-201ENST00000259043 PSG3Q16557 428 aa2.85□□□□□ -1.95
TRA2B-201ENST00000259043 MINOS1Q5TGZ0 78 aa2.85□□□□□ -1.95
TRA2B-201ENST00000259043 NTM-AS1Q6ZSK4 140 aa2.85□□□□□ -1.95
TRA2B-201ENST00000259043 TCF23Q7RTU1 214 aa2.85□□□□□ -1.95
TRA2B-201ENST00000259043 SLC16A13Q7RTY0 426 aa2.85□□□□□ -1.95
TRA2B-201ENST00000259043 LYZL2Q7Z4W2 148 aa2.85□□□□□ -1.95
TRA2B-201ENST00000259043 COMMD7Q86VX2 200 aa2.85□□□□□ -1.95
TRA2B-201ENST00000259043 EIF4E3Q8N5X7 224 aaKnown RBP2.85□□□□□ -1.95
TRA2B-201ENST00000259043 ZNF645Q8N7E2 425 aa2.85□□□□□ -1.95
TRA2B-201ENST00000259043 SLC35G3Q8N808 338 aa2.85□□□□□ -1.95
TRA2B-201ENST00000259043 OR11H6Q8NGC7 330 aa2.85□□□□□ -1.95
TRA2B-201ENST00000259043 OR13D1Q8NGV5 346 aa2.85□□□□□ -1.95
TRA2B-201ENST00000259043 STOML3Q8TAV4 291 aa2.85□□□□□ -1.95
TRA2B-201ENST00000259043 RBPMSQ93062 196 aaKnown RBP2.85□□□□□ -1.95
TRA2B-201ENST00000259043 FAM19A4Q96LR4 140 aa2.85□□□□□ -1.95
TRA2B-201ENST00000259043 TP53RKQ96S44 253 aa2.85□□□□□ -1.95
TRA2B-201ENST00000259043 NABP2Q9BQ15 211 aa2.85□□□□□ -1.95
TRA2B-201ENST00000259043 ZNF471Q9BX82 626 aaPredicted RBP2.85□□□□□ -1.95
TRA2B-201ENST00000259043 TMEM222Q9H0R3 208 aa2.85□□□□□ -1.95
TRA2B-201ENST00000259043 SDHAF2Q9NX18 166 aa2.85□□□□□ -1.95
TRA2B-201ENST00000259043 JPT1Q9UK76 154 aa2.85□□□□□ -1.95
TRA2B-201ENST00000259043 PSG11Q9UQ72 335 aa2.85□□□□□ -1.95
TRA2B-201ENST00000259043 PRELID3BQ9Y3B1 194 aa2.85□□□□□ -1.95
TRA2B-201ENST00000259043 HILPDAQ9Y5L2 63 aa2.85□□□□□ -1.95
TRA2B-201ENST00000259043 MINOS1-NBL1R4GNA1 71 aa2.85□□□□□ -1.95
TRA2B-201ENST00000259043 BORCS7-ASMTA0A0B4J1R7 106 aa2.84□□□□□ -1.95
TRA2B-201ENST00000259043 ZNF729A6NN14 1252 aaPredicted RBP2.84□□□□□ -1.95
TRA2B-201ENST00000259043 M0R1X1 148 aa2.84□□□□□ -1.95
TRA2B-201ENST00000259043 TOR1AO14656 332 aa2.84□□□□□ -1.95
TRA2B-201ENST00000259043 SSSCA1O60232 199 aa2.84□□□□□ -1.95
TRA2B-201ENST00000259043 CDS2O95674 445 aa2.84□□□□□ -1.95
TRA2B-201ENST00000259043 TRBV12-3P01733 135 aa2.84□□□□□ -1.95
TRA2B-201ENST00000259043 IGHV3-11P01762 117 aa2.84□□□□□ -1.95
TRA2B-201ENST00000259043 IGHV3-7P01780 117 aa2.84□□□□□ -1.95
TRA2B-201ENST00000259043 IL3RAP26951 378 aa2.84□□□□□ -1.95
TRA2B-201ENST00000259043 LPAR6P43657 344 aa2.84□□□□□ -1.95
TRA2B-201ENST00000259043 MEF2CQ06413 473 aaPredicted RBP2.84□□□□□ -1.95
TRA2B-201ENST00000259043 ZNF816Q0VGE8 651 aaPredicted RBP2.84□□□□□ -1.95
TRA2B-201ENST00000259043 MSMO1Q15800 293 aa2.84□□□□□ -1.95
TRA2B-201ENST00000259043 EIF5AL1Q6IS14 154 aaKnown RBP2.84□□□□□ -1.95
TRA2B-201ENST00000259043 ZNF880Q6PDB4 577 aa2.84□□□□□ -1.95
TRA2B-201ENST00000259043 PRSS54Q6PEW0 395 aa2.84□□□□□ -1.95
TRA2B-201ENST00000259043 ALKAL2Q6UX46 152 aa2.84□□□□□ -1.95
TRA2B-201ENST00000259043 SLC51BQ86UW2 128 aa2.84□□□□□ -1.95
TRA2B-201ENST00000259043 DRAM1Q8N682 238 aa2.84□□□□□ -1.95
TRA2B-201ENST00000259043 OR10X1Q8NGY0 326 aa2.84□□□□□ -1.95
TRA2B-201ENST00000259043 C4orf3Q8WVX3 66 aa2.84□□□□□ -1.95
TRA2B-201ENST00000259043 OR10C1Q96KK4 312 aa2.84□□□□□ -1.95
TRA2B-201ENST00000259043 ZNF714Q96N38 554 aa2.84□□□□□ -1.95
TRA2B-201ENST00000259043 GGTLC1Q9BX51 225 aa2.84□□□□□ -1.95
TRA2B-201ENST00000259043 SLC25A31Q9H0C2 315 aa2.84□□□□□ -1.95
TRA2B-201ENST00000259043 ENY2Q9NPA8 101 aa2.84□□□□□ -1.95
TRA2B-201ENST00000259043 IDI2-AS1Q9NZ38 188 aa2.84□□□□□ -1.95
TRA2B-201ENST00000259043 LINC00527Q9UJ94 153 aa2.84□□□□□ -1.95
TRA2B-201ENST00000259043 VPS13DQ5THJ4 4388 aa2.83□□□□□ -1.96
TRA2B-201ENST00000259043 IGHV2-26A0A0B4J1V2 119 aa2.83□□□□□ -1.96
TRA2B-201ENST00000259043 NUPR2A6NF83 97 aa2.83□□□□□ -1.96
TRA2B-201ENST00000259043 CEBPZOSA8MTT3 80 aa2.83□□□□□ -1.96
TRA2B-201ENST00000259043 C15orf65H3BRN8 121 aa2.83□□□□□ -1.96
TRA2B-201ENST00000259043 I3L521 148 aa2.83□□□□□ -1.96
TRA2B-201ENST00000259043 RBFOX2O43251 390 aaKnown RBP eCLIP2.83□□□□□ -1.96
TRA2B-201ENST00000259043 FGF16O43320 207 aa2.83□□□□□ -1.96
TRA2B-201ENST00000259043 YPEL1O60688 119 aa2.83□□□□□ -1.96
TRA2B-201ENST00000259043 ZNF737O75373 536 aa2.83□□□□□ -1.96
TRA2B-201ENST00000259043 DEDDO75618 318 aa2.83□□□□□ -1.96
TRA2B-201ENST00000259043 CRYZL1O95825 349 aa2.83□□□□□ -1.96
TRA2B-201ENST00000259043 KRASP01116 189 aa2.83□□□□□ -1.96
TRA2B-201ENST00000259043 TPT1P13693 172 aaKnown RBP2.83□□□□□ -1.96
TRA2B-201ENST00000259043 M6PRP20645 277 aa2.83□□□□□ -1.96
TRA2B-201ENST00000259043 CNTFRP26992 372 aa2.83□□□□□ -1.96
TRA2B-201ENST00000259043 RPL12P30050 165 aaKnown RBP2.83□□□□□ -1.96
TRA2B-201ENST00000259043 BRS3P32247 399 aa2.83□□□□□ -1.96
TRA2B-201ENST00000259043 G6PCP35575 357 aa2.83□□□□□ -1.96
TRA2B-201ENST00000259043 PSMB2P49721 201 aa2.83□□□□□ -1.96
TRA2B-201ENST00000259043 RTL8BQ17RB0 113 aa2.83□□□□□ -1.96
TRA2B-201ENST00000259043 MORN2Q502X0 79 aa2.83□□□□□ -1.96
TRA2B-201ENST00000259043 ZFP2Q6ZN57 461 aa2.83□□□□□ -1.96
TRA2B-201ENST00000259043 STX12Q86Y82 276 aa2.83□□□□□ -1.96
Retrieved 100 of 20,778 RNA–protein pairs in 42.7 ms