RNA–Protein interactions for RNA: ENST00000252816.10

LSM4-201, Transcript of LSM4 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 2 BASIC

Gene LSM4, Length 986 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM4-201ENST00000252816 GOLT1AQ6ZVE7 132 aa16.1■□□□□ 0.17
LSM4-201ENST00000252816 C15orf53Q8NAA6 179 aa16.1■□□□□ 0.17
LSM4-201ENST00000252816 ACTR3CQ9C0K3 210 aaPredicted RBP16.1■□□□□ 0.17
LSM4-201ENST00000252816 LENEPQ9Y5L5 61 aa16.1■□□□□ 0.17
LSM4-201ENST00000252816 IGHV1OR15-1A0A075B7D0 117 aa16.09■□□□□ 0.17
LSM4-201ENST00000252816 ARL6IP6Q8N6S5 226 aa16.09■□□□□ 0.17
LSM4-201ENST00000252816 TMED6Q8WW62 240 aa16.09■□□□□ 0.17
LSM4-201ENST00000252816 CYTL1Q9NRR1 136 aa16.09■□□□□ 0.17
LSM4-201ENST00000252816 KLF12Q9Y4X4 402 aa16.09■□□□□ 0.17
LSM4-201ENST00000252816 TRAV8-1A0A0A6YYK1 113 aa16.08■□□□□ 0.16
LSM4-201ENST00000252816 TCL1AP56279 114 aa16.08■□□□□ 0.16
LSM4-201ENST00000252816 ZNF726P1Q15940 193 aa16.08■□□□□ 0.16
LSM4-201ENST00000252816 UBE2DNLQ8IWF7 75 aa16.08■□□□□ 0.16
LSM4-201ENST00000252816 ST6GAL2Q96JF0 529 aa16.08■□□□□ 0.16
LSM4-201ENST00000252816 BIRC6Q9NR09 4857 aa16.08■□□□□ 0.16
LSM4-201ENST00000252816 CXorf1O96002 111 aa16.07■□□□□ 0.16
LSM4-201ENST00000252816 HOXA5P20719 270 aa16.07■□□□□ 0.16
LSM4-201ENST00000252816 TVP23CQ96ET8 276 aa16.07■□□□□ 0.16
LSM4-201ENST00000252816 TAAR5O14804 337 aa16.06■□□□□ 0.16
LSM4-201ENST00000252816 RNF212Q495C1 297 aa16.06■□□□□ 0.16
LSM4-201ENST00000252816 MUC21Q5SSG8 566 aa16.06■□□□□ 0.16
LSM4-201ENST00000252816 IBA57Q5T440 356 aaKnown RBP16.06■□□□□ 0.16
LSM4-201ENST00000252816 Q6AWC8 147 aa16.06■□□□□ 0.16
LSM4-201ENST00000252816 TMPRSS5Q9H3S3 457 aa16.06■□□□□ 0.16
LSM4-201ENST00000252816 TRGV1A0A0A0MS02 117 aa16.05■□□□□ 0.16
LSM4-201ENST00000252816 SPINK4O60575 86 aa16.05■□□□□ 0.16
LSM4-201ENST00000252816 NUDT3O95989 172 aa16.05■□□□□ 0.16
LSM4-201ENST00000252816 OR5I1Q13606 314 aa16.05■□□□□ 0.16
LSM4-201ENST00000252816 OR11H4Q8NGC9 324 aa16.05■□□□□ 0.16
LSM4-201ENST00000252816 TMEM167BQ9NRX6 74 aa16.05■□□□□ 0.16
LSM4-201ENST00000252816 DNAH2Q9P225 4427 aa16.05■□□□□ 0.16
LSM4-201ENST00000252816 GGTLC3B5MD39 225 aa16.04■□□□□ 0.16
LSM4-201ENST00000252816 C5orf17Q8NAS9 161 aa16.04■□□□□ 0.16
LSM4-201ENST00000252816 SGK494Q96LW2 274 aa16.04■□□□□ 0.16
LSM4-201ENST00000252816 ARPC5LQ9BPX5 153 aa16.04■□□□□ 0.16
LSM4-201ENST00000252816 TRAV26-1A0A087WT03 109 aa16.03■□□□□ 0.16
LSM4-201ENST00000252816 CTXND1A0A1B0GTU2 59 aa16.03■□□□□ 0.16
LSM4-201ENST00000252816 M0R2N4 97 aa16.03■□□□□ 0.16
LSM4-201ENST00000252816 TCRAP04437 139 aa16.03■□□□□ 0.16
LSM4-201ENST00000252816 SUMO1P63165 101 aaKnown RBP16.03■□□□□ 0.16
LSM4-201ENST00000252816 IQCF2Q8IXL9 164 aa16.03■□□□□ 0.16
LSM4-201ENST00000252816 C18orf15Q96N68 181 aa16.03■□□□□ 0.16
LSM4-201ENST00000252816 IGLV2-18A0A075B6J9 118 aa16.02■□□□□ 0.16
LSM4-201ENST00000252816 TRGV2A0A075B6R0 118 aa16.02■□□□□ 0.16
LSM4-201ENST00000252816 F6UZH7 168 aa16.02■□□□□ 0.16
LSM4-201ENST00000252816 AKR1C8PQ5T2L2 129 aa16.02■□□□□ 0.16
LSM4-201ENST00000252816 KCNRGQ8N5I3 272 aa16.02■□□□□ 0.16
LSM4-201ENST00000252816 MDFICQ9P1T7 246 aa16.02■□□□□ 0.16
LSM4-201ENST00000252816 NACAE9PAV3 2078 aa16.02■□□□□ 0.15
LSM4-201ENST00000252816 A0A0J9YY99 117 aa16.01■□□□□ 0.15
LSM4-201ENST00000252816 ZNF345Q14585 488 aa16.01■□□□□ 0.15
LSM4-201ENST00000252816 TREM1Q9NP99 234 aa16.01■□□□□ 0.15
LSM4-201ENST00000252816 MRPL16Q9NX20 251 aaKnown RBP16.01■□□□□ 0.15
LSM4-201ENST00000252816 SERTM2A0A1B0GWG4 89 aa16■□□□□ 0.15
LSM4-201ENST00000252816 FGF8P55075 233 aaPredicted RBP16■□□□□ 0.15
LSM4-201ENST00000252816 ZNF415Q09FC8 603 aa16■□□□□ 0.15
LSM4-201ENST00000252816 TMEM183BQ1AE95 376 aa16■□□□□ 0.15
LSM4-201ENST00000252816 TMEM183AQ8IXX5 376 aa16■□□□□ 0.15
LSM4-201ENST00000252816 ATG101Q9BSB4 218 aa16■□□□□ 0.15
LSM4-201ENST00000252816 NAGKQ9UJ70 344 aa16■□□□□ 0.15
LSM4-201ENST00000252816 EPDR1Q9UM22 224 aa16■□□□□ 0.15
LSM4-201ENST00000252816 A0A1W2PRE2 83 aa15.99■□□□□ 0.15
LSM4-201ENST00000252816 HMSDA8MTL9 139 aa15.99■□□□□ 0.15
LSM4-201ENST00000252816 IGLV2-11P01706 119 aa15.99■□□□□ 0.15
LSM4-201ENST00000252816 LGALS9BQ3B8N2 356 aa15.99■□□□□ 0.15
LSM4-201ENST00000252816 FAM159AQ6UWV7 190 aa15.99■□□□□ 0.15
LSM4-201ENST00000252816 TDRG1Q3Y452 100 aa15.98■□□□□ 0.15
LSM4-201ENST00000252816 Q6ZR54 194 aa15.98■□□□□ 0.15
LSM4-201ENST00000252816 MUC4Q99102 2169 aa15.98■□□□□ 0.15
LSM4-201ENST00000252816 PSG8Q9UQ74 426 aa15.98■□□□□ 0.15
LSM4-201ENST00000252816 FAT2Q9NYQ8 4349 aa15.98■□□□□ 0.15
LSM4-201ENST00000252816 TRAV21A0A0B4J279 112 aa15.97■□□□□ 0.15
LSM4-201ENST00000252816 FAM3BP58499 235 aaPredicted RBP15.97■□□□□ 0.15
LSM4-201ENST00000252816 UBE2G2P60604 165 aa15.97■□□□□ 0.15
LSM4-201ENST00000252816 CYB561D1Q8N8Q1 229 aa15.97■□□□□ 0.15
LSM4-201ENST00000252816 VSIG2Q96IQ7 327 aa15.97■□□□□ 0.15
LSM4-201ENST00000252816 C8orf49Q96NF6 230 aa15.97■□□□□ 0.15
LSM4-201ENST00000252816 LINC00588Q9Y4M8 146 aa15.97■□□□□ 0.15
LSM4-201ENST00000252816 DNAH17Q9UFH2 4485 aa15.97■□□□□ 0.15
LSM4-201ENST00000252816 HECTD4Q9Y4D8 3996 aa15.96■□□□□ 0.15
LSM4-201ENST00000252816 TRGV11A0A075B6L2 103 aa15.96■□□□□ 0.15
LSM4-201ENST00000252816 K7EQM0 130 aa15.96■□□□□ 0.15
LSM4-201ENST00000252816 GNRH2O43555 120 aa15.96■□□□□ 0.15
LSM4-201ENST00000252816 IGHV3-53P01767 116 aa15.96■□□□□ 0.15
LSM4-201ENST00000252816 ZNF80P51504 273 aaPredicted RBP15.96■□□□□ 0.15
LSM4-201ENST00000252816 NDFIP1Q9BT67 221 aa15.96■□□□□ 0.15
LSM4-201ENST00000252816 MAP1LC3B2A6NCE7 125 aa15.95■□□□□ 0.14
LSM4-201ENST00000252816 H3BNG1 76 aa15.95■□□□□ 0.14
LSM4-201ENST00000252816 FHITP49789 147 aa15.95■□□□□ 0.14
LSM4-201ENST00000252816 CCL18P55774 89 aa15.95■□□□□ 0.14
LSM4-201ENST00000252816 FLI1Q01543 452 aaPredicted RBP15.95■□□□□ 0.14
LSM4-201ENST00000252816 LINC00479Q96M42 142 aa15.95■□□□□ 0.14
LSM4-201ENST00000252816 MAP1LC3BQ9GZQ8 125 aa15.95■□□□□ 0.14
LSM4-201ENST00000252816 A0A0D9SG52 128 aa15.94■□□□□ 0.14
LSM4-201ENST00000252816 FAM74A7A6NL05 159 aa15.94■□□□□ 0.14
LSM4-201ENST00000252816 PRNTQ86SH4 94 aa15.94■□□□□ 0.14
LSM4-201ENST00000252816 TMEM75Q8N9X5 138 aa15.94■□□□□ 0.14
LSM4-201ENST00000252816 ZNRF2Q8NHG8 242 aa15.94■□□□□ 0.14
LSM4-201ENST00000252816 TRAV34A0A0B4J273 112 aa15.93■□□□□ 0.14
LSM4-201ENST00000252816 IGHV3-16A0A0C4DH30 117 aa15.93■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms