RNA–Protein interactions for RNA: ENST00000233242.5

APOB-201, Transcript of apolipoprotein B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene APOB, Length 14,121 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOB-201ENST00000233242 PRR20CP86479 221 aa6.6□□□□□ -1.35
APOB-201ENST00000233242 PRR20DP86480 221 aa6.6□□□□□ -1.35
APOB-201ENST00000233242 PRR20BP86481 221 aa6.6□□□□□ -1.35
APOB-201ENST00000233242 PRR20AP86496 221 aa6.6□□□□□ -1.35
APOB-201ENST00000233242 ZNF625Q96I27 306 aaPredicted RBP6.6□□□□□ -1.35
APOB-201ENST00000233242 A0A087WWL8 130 aa6.6□□□□□ -1.35
APOB-201ENST00000233242 TRGV1A0A0A0MS02 117 aa6.6□□□□□ -1.35
APOB-201ENST00000233242 TFF1P04155 84 aa6.6□□□□□ -1.35
APOB-201ENST00000233242 HERVK_113P63121 156 aa6.6□□□□□ -1.35
APOB-201ENST00000233242 CSRP1P21291 193 aaKnown RBP6.6□□□□□ -1.35
APOB-201ENST00000233242 C8orf49Q96NF6 230 aa6.6□□□□□ -1.35
APOB-201ENST00000233242 DSCR8Q96T75 97 aa6.6□□□□□ -1.35
APOB-201ENST00000233242 DSCR9P59020 149 aa6.6□□□□□ -1.35
APOB-201ENST00000233242 ZC2HC1AQ96GY0 325 aa6.6□□□□□ -1.35
APOB-201ENST00000233242 TCTEX1D4Q5JR98 221 aa6.6□□□□□ -1.35
APOB-201ENST00000233242 Q8NFD4 153 aa6.6□□□□□ -1.35
APOB-201ENST00000233242 LENEPQ9Y5L5 61 aa6.6□□□□□ -1.35
APOB-201ENST00000233242 K7EN84 100 aa6.59□□□□□ -1.35
APOB-201ENST00000233242 B3GALT5-AS1P59052 145 aa6.59□□□□□ -1.35
APOB-201ENST00000233242 LINC00311Q8N616 119 aa6.59□□□□□ -1.35
APOB-201ENST00000233242 FAM110DQ8TAY7 271 aaPredicted RBP6.59□□□□□ -1.35
APOB-201ENST00000233242 MRAPQ8TCY5 172 aa6.59□□□□□ -1.35
APOB-201ENST00000233242 NTN5Q8WTR8 489 aaPredicted RBP6.59□□□□□ -1.35
APOB-201ENST00000233242 CRYBA4P53673 196 aa6.59□□□□□ -1.35
APOB-201ENST00000233242 RBM3P98179 157 aaKnown RBP6.59□□□□□ -1.35
APOB-201ENST00000233242 RBAKDNA6NC62 111 aa6.59□□□□□ -1.35
APOB-201ENST00000233242 INS-IGF2F8WCM5 200 aa6.59□□□□□ -1.35
APOB-201ENST00000233242 MRPL53Q96EL3 112 aaKnown RBP6.59□□□□□ -1.35
APOB-201ENST00000233242 TRBV25-1A0A075B6N4 114 aa6.59□□□□□ -1.35
APOB-201ENST00000233242 E9PLN8 166 aa6.59□□□□□ -1.35
APOB-201ENST00000233242 C8orf86Q6ZUL3 223 aa6.59□□□□□ -1.36
APOB-201ENST00000233242 RLFQ13129 1914 aa6.58□□□□□ -1.36
APOB-201ENST00000233242 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP6.58□□□□□ -1.36
APOB-201ENST00000233242 RHPN1-AS1Q9BWJ2 59 aa6.58□□□□□ -1.36
APOB-201ENST00000233242 IGHV3-73A0A0B4J1V6 119 aa6.58□□□□□ -1.36
APOB-201ENST00000233242 METRNQ9UJH8 293 aa6.58□□□□□ -1.36
APOB-201ENST00000233242 HOXD3P31249 432 aaPredicted RBP6.58□□□□□ -1.36
APOB-201ENST00000233242 PRDM6Q9NQX0 595 aa6.58□□□□□ -1.36
APOB-201ENST00000233242 IGHV1-69DA0A0B4J2H0 117 aa6.58□□□□□ -1.36
APOB-201ENST00000233242 FOXG1P55316 489 aaPredicted RBP6.58□□□□□ -1.36
APOB-201ENST00000233242 PINLYPA6NC86 204 aa6.58□□□□□ -1.36
APOB-201ENST00000233242 TNS1Q9HBL0 1735 aaKnown RBP6.58□□□□□ -1.36
APOB-201ENST00000233242 NCKAP5O14513 1909 aa6.58□□□□□ -1.36
APOB-201ENST00000233242 CRIPAKQ8N1N5 446 aa6.58□□□□□ -1.36
APOB-201ENST00000233242 CD24P25063 80 aa6.58□□□□□ -1.36
APOB-201ENST00000233242 PCP2Q8IVA1 136 aa6.58□□□□□ -1.36
APOB-201ENST00000233242 DKK2Q9UBU2 259 aa6.57□□□□□ -1.36
APOB-201ENST00000233242 H0YGX0 51 aa6.57□□□□□ -1.36
APOB-201ENST00000233242 IGLV3-1P01715 115 aa6.57□□□□□ -1.36
APOB-201ENST00000233242 TAX1BP3O14907 124 aa6.57□□□□□ -1.36
APOB-201ENST00000233242 C8orf31Q8N9H6 132 aa6.57□□□□□ -1.36
APOB-201ENST00000233242 HAMPP81172 84 aa6.57□□□□□ -1.36
APOB-201ENST00000233242 CRLF1O75462 422 aa6.57□□□□□ -1.36
APOB-201ENST00000233242 ZNF672Q499Z4 452 aaPredicted RBP6.57□□□□□ -1.36
APOB-201ENST00000233242 PLXNA2O75051 1894 aa6.57□□□□□ -1.36
APOB-201ENST00000233242 MLANAQ16655 118 aa6.57□□□□□ -1.36
APOB-201ENST00000233242 IGFBPL1Q8WX77 278 aa6.57□□□□□ -1.36
APOB-201ENST00000233242 EPOPA6NHQ4 379 aa6.57□□□□□ -1.36
APOB-201ENST00000233242 CITED2Q99967 270 aaPredicted RBP6.56□□□□□ -1.36
APOB-201ENST00000233242 IGHG3P01860 377 aa6.56□□□□□ -1.36
APOB-201ENST00000233242 CR1LQ2VPA4 569 aa6.56□□□□□ -1.36
APOB-201ENST00000233242 IGHV1OR15-1A0A075B7D0 117 aa6.56□□□□□ -1.36
APOB-201ENST00000233242 PRSS29PA6NIE9 313 aa6.56□□□□□ -1.36
APOB-201ENST00000233242 C15orf65H3BRN8 121 aa6.56□□□□□ -1.36
APOB-201ENST00000233242 BAALC-AS2P0C853 105 aa6.56□□□□□ -1.36
APOB-201ENST00000233242 Q71RC1 249 aaPredicted RBP6.56□□□□□ -1.36
APOB-201ENST00000233242 ORMDL1Q9P0S3 153 aa6.56□□□□□ -1.36
APOB-201ENST00000233242 SAP30O75446 220 aa6.56□□□□□ -1.36
APOB-201ENST00000233242 HTN3P15516 51 aa6.56□□□□□ -1.36
APOB-201ENST00000233242 FOXI1Q12951 378 aa6.56□□□□□ -1.36
APOB-201ENST00000233242 TMEM243Q9BU79 118 aa6.56□□□□□ -1.36
APOB-201ENST00000233242 A0A0B4J2C4 111 aa6.56□□□□□ -1.36
APOB-201ENST00000233242 H3BT86 120 aa6.56□□□□□ -1.36
APOB-201ENST00000233242 HERV-K104P63124 156 aa6.56□□□□□ -1.36
APOB-201ENST00000233242 EFNA4P52798 201 aa6.56□□□□□ -1.36
APOB-201ENST00000233242 MDS2Q8NDY4 140 aa6.56□□□□□ -1.36
APOB-201ENST00000233242 UNQ6494/PRO21346Q6UXR6 183 aa6.55□□□□□ -1.36
APOB-201ENST00000233242 TRAV12-1A0A0B4J245 112 aa6.55□□□□□ -1.36
APOB-201ENST00000233242 PLXNB3Q9ULL4 1909 aa6.55□□□□□ -1.36
APOB-201ENST00000233242 WT1-ASQ06250 92 aa6.55□□□□□ -1.36
APOB-201ENST00000233242 NDPQ00604 133 aa6.55□□□□□ -1.36
APOB-201ENST00000233242 SH2D6Q7Z4S9 175 aa6.55□□□□□ -1.36
APOB-201ENST00000233242 FNDC1Q4ZHG4 1894 aaPredicted RBP6.55□□□□□ -1.36
APOB-201ENST00000233242 C5orf24Q7Z6I8 188 aa6.55□□□□□ -1.36
APOB-201ENST00000233242 ANAPC1Q9H1A4 1944 aa6.55□□□□□ -1.36
APOB-201ENST00000233242 MBD3L4A6NDZ8 208 aaPredicted RBP6.55□□□□□ -1.36
APOB-201ENST00000233242 MBD3L3A6NE82 208 aaPredicted RBP6.55□□□□□ -1.36
APOB-201ENST00000233242 MBD3L5A6NJ08 208 aaPredicted RBP6.55□□□□□ -1.36
APOB-201ENST00000233242 SPATA12Q7Z6I5 190 aa6.55□□□□□ -1.36
APOB-201ENST00000233242 MBD3L2Q8NHZ7 208 aaPredicted RBP6.55□□□□□ -1.36
APOB-201ENST00000233242 KNCNA6PVL3 124 aa6.55□□□□□ -1.36
APOB-201ENST00000233242 LINC00205P59089 165 aa6.55□□□□□ -1.36
APOB-201ENST00000233242 HCFC1P51610 2035 aa6.55□□□□□ -1.36
APOB-201ENST00000233242 NDUFA4O00483 81 aa6.55□□□□□ -1.36
APOB-201ENST00000233242 ZNF134P52741 427 aa6.55□□□□□ -1.36
APOB-201ENST00000233242 C1orf43Q9BWL3 253 aa6.55□□□□□ -1.36
APOB-201ENST00000233242 F6UB75 175 aa6.54□□□□□ -1.36
APOB-201ENST00000233242 FAM120AOSQ5T036 256 aa6.54□□□□□ -1.36
APOB-201ENST00000233242 IGFL4Q6B9Z1 124 aa6.54□□□□□ -1.36
APOB-201ENST00000233242 SUMO4Q6EEV6 95 aa6.54□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 276.5 ms