RNA–Protein interactions for RNA: ENST00000225441.11

RUNDC3A-201, Transcript of RUN domain containing 3A, humanhuman

TSL 1 (best) BASIC

Gene RUNDC3A, Length 1,821 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RUNDC3A-201ENST00000225441 A0A096LNJ9 63 aa19.2■□□□□ 0.66
RUNDC3A-201ENST00000225441 TRAV40A0A0B4J280 105 aa19.2■□□□□ 0.66
RUNDC3A-201ENST00000225441 IGHV1-69DA0A0B4J2H0 117 aa19.2■□□□□ 0.66
RUNDC3A-201ENST00000225441 TGFAP01135 160 aa19.2■□□□□ 0.66
RUNDC3A-201ENST00000225441 IGHV1-69P01742 117 aa19.2■□□□□ 0.66
RUNDC3A-201ENST00000225441 CKS2P33552 79 aa19.2■□□□□ 0.66
RUNDC3A-201ENST00000225441 TWIST1Q15672 202 aa19.2■□□□□ 0.66
RUNDC3A-201ENST00000225441 BVES-AS1Q5T3Y7 98 aa19.2■□□□□ 0.66
RUNDC3A-201ENST00000225441 CR1P17927 2039 aa19.2■□□□□ 0.66
RUNDC3A-201ENST00000225441 GPR183P32249 361 aa19.19■□□□□ 0.66
RUNDC3A-201ENST00000225441 ZNF80P51504 273 aaPredicted RBP19.19■□□□□ 0.66
RUNDC3A-201ENST00000225441 PTTG1IPP53801 180 aa19.19■□□□□ 0.66
RUNDC3A-201ENST00000225441 PIP4P2Q8N4L2 257 aa19.19■□□□□ 0.66
RUNDC3A-201ENST00000225441 J3QLI3 93 aa19.18■□□□□ 0.66
RUNDC3A-201ENST00000225441 MPV17L2Q567V2 206 aa19.18■□□□□ 0.66
RUNDC3A-201ENST00000225441 IGHV3OR16-10A0A075B7F0 116 aa19.18■□□□□ 0.66
RUNDC3A-201ENST00000225441 NUDT3O95989 172 aa19.18■□□□□ 0.66
RUNDC3A-201ENST00000225441 CLEC3BP05452 202 aa19.18■□□□□ 0.66
RUNDC3A-201ENST00000225441 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa19.18■□□□□ 0.66
RUNDC3A-201ENST00000225441 DEFB125Q8N687 156 aa19.18■□□□□ 0.66
RUNDC3A-201ENST00000225441 ATP6V0E1O15342 81 aa19.17■□□□□ 0.66
RUNDC3A-201ENST00000225441 TCF21O43680 179 aa19.17■□□□□ 0.66
RUNDC3A-201ENST00000225441 AVPP01185 164 aa19.16■□□□□ 0.66
RUNDC3A-201ENST00000225441 IGHV4-38-2P0DP08 117 aa19.16■□□□□ 0.66
RUNDC3A-201ENST00000225441 Q8TAT8 98 aa19.16■□□□□ 0.66
RUNDC3A-201ENST00000225441 ORM1P02763 201 aa19.16■□□□□ 0.66
RUNDC3A-201ENST00000225441 ECSCRQ19T08 205 aa19.16■□□□□ 0.66
RUNDC3A-201ENST00000225441 ZNF575Q86XF7 245 aa19.16■□□□□ 0.66
RUNDC3A-201ENST00000225441 METTL26Q96S19 204 aa19.16■□□□□ 0.66
RUNDC3A-201ENST00000225441 MAP1LC3AQ9H492 121 aa19.16■□□□□ 0.66
RUNDC3A-201ENST00000225441 U3KQE9 123 aa19.16■□□□□ 0.66
RUNDC3A-201ENST00000225441 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP19.16■□□□□ 0.66
RUNDC3A-201ENST00000225441 ITPR2Q14571 2701 aa19.16■□□□□ 0.66
RUNDC3A-201ENST00000225441 PRRC2AP48634 2157 aaKnown RBP19.15■□□□□ 0.66
RUNDC3A-201ENST00000225441 LOC389332A0A1B0GUA5 103 aa19.15■□□□□ 0.66
RUNDC3A-201ENST00000225441 CD5LO43866 347 aa19.15■□□□□ 0.66
RUNDC3A-201ENST00000225441 CLPSL1A2RUU4 121 aa19.14■□□□□ 0.65
RUNDC3A-201ENST00000225441 CRIP2P52943 208 aaPredicted RBP19.14■□□□□ 0.65
RUNDC3A-201ENST00000225441 BRD3OSQ6XYD6 125 aa19.14■□□□□ 0.65
RUNDC3A-201ENST00000225441 NXT2Q9NPJ8 142 aaKnown RBP19.14■□□□□ 0.65
RUNDC3A-201ENST00000225441 H0Y8G0 127 aa19.14■□□□□ 0.65
RUNDC3A-201ENST00000225441 CCL25O15444 150 aa19.14■□□□□ 0.65
RUNDC3A-201ENST00000225441 CCDC140Q96MF4 163 aa19.14■□□□□ 0.65
RUNDC3A-201ENST00000225441 SIVA1O15304 175 aa19.13■□□□□ 0.65
RUNDC3A-201ENST00000225441 NPYP01303 97 aa19.13■□□□□ 0.65
RUNDC3A-201ENST00000225441 OR8A1Q8NGG7 326 aa19.13■□□□□ 0.65
RUNDC3A-201ENST00000225441 PIFOQ8TCI5 191 aa19.13■□□□□ 0.65
RUNDC3A-201ENST00000225441 IFI27L1Q96BM0 104 aa19.13■□□□□ 0.65
RUNDC3A-201ENST00000225441 RNF185Q96GF1 192 aa19.13■□□□□ 0.65
RUNDC3A-201ENST00000225441 CBY1Q9Y3M2 126 aa19.13■□□□□ 0.65
RUNDC3A-201ENST00000225441 NCR2O95944 276 aa19.12■□□□□ 0.65
RUNDC3A-201ENST00000225441 HLA-DMBP28068 263 aa19.12■□□□□ 0.65
RUNDC3A-201ENST00000225441 SEC11AP67812 179 aa19.12■□□□□ 0.65
RUNDC3A-201ENST00000225441 FAM106AQ4KMX7 169 aa19.12■□□□□ 0.65
RUNDC3A-201ENST00000225441 TIMM8BQ9Y5J9 83 aaPredicted RBP19.12■□□□□ 0.65
RUNDC3A-201ENST00000225441 FAM223BA6NKX1 122 aa19.11■□□□□ 0.65
RUNDC3A-201ENST00000225441 FAM223AQ8IWN6 122 aa19.11■□□□□ 0.65
RUNDC3A-201ENST00000225441 TAX1BP3O14907 124 aa19.11■□□□□ 0.65
RUNDC3A-201ENST00000225441 ATP5G2Q06055 141 aa19.11■□□□□ 0.65
RUNDC3A-201ENST00000225441 C9orf47Q6ZRZ4 202 aa19.11■□□□□ 0.65
RUNDC3A-201ENST00000225441 C5orf56Q8N8D9 126 aa19.11■□□□□ 0.65
RUNDC3A-201ENST00000225441 LENEPQ9Y5L5 61 aa19.11■□□□□ 0.65
RUNDC3A-201ENST00000225441 CLEC19AQ6UXS0 136 aa19.1■□□□□ 0.65
RUNDC3A-201ENST00000225441 OR9G4Q8NGQ1 327 aa19.1■□□□□ 0.65
RUNDC3A-201ENST00000225441 CSMD1Q96PZ7 3565 aa19.1■□□□□ 0.65
RUNDC3A-201ENST00000225441 K7EP13 123 aa19.09■□□□□ 0.65
RUNDC3A-201ENST00000225441 TMEM78Q5T7P6 136 aa19.09■□□□□ 0.65
RUNDC3A-201ENST00000225441 IGFL4Q6B9Z1 124 aa19.09■□□□□ 0.65
RUNDC3A-201ENST00000225441 MCRIP2Q9BUT9 160 aaKnown RBP19.09■□□□□ 0.65
RUNDC3A-201ENST00000225441 PRSS47A8MTI9 375 aa19.09■□□□□ 0.65
RUNDC3A-201ENST00000225441 SMAD7O15105 426 aaKnown RBP19.09■□□□□ 0.65
RUNDC3A-201ENST00000225441 BRI3O95415 125 aa19.09■□□□□ 0.65
RUNDC3A-201ENST00000225441 FCER1GP30273 86 aa19.09■□□□□ 0.65
RUNDC3A-201ENST00000225441 ERCC8Q13216 396 aa19.09■□□□□ 0.65
RUNDC3A-201ENST00000225441 C2orf91Q6ZV80 131 aa19.09■□□□□ 0.65
RUNDC3A-201ENST00000225441 BOD1L2Q8IYS8 172 aa19.09■□□□□ 0.65
RUNDC3A-201ENST00000225441 MOB4Q9Y3A3 225 aa19.09■□□□□ 0.65
RUNDC3A-201ENST00000225441 CREBBPQ92793 2442 aa19.08■□□□□ 0.65
RUNDC3A-201ENST00000225441 PRAC2D3DTV9 90 aa19.08■□□□□ 0.64
RUNDC3A-201ENST00000225441 PRB4P10163 310 aaPredicted RBP19.08■□□□□ 0.64
RUNDC3A-201ENST00000225441 C19orf54Q5BKX5 351 aa19.08■□□□□ 0.64
RUNDC3A-201ENST00000225441 AGPAT4-IT1Q9H0P7 198 aa19.08■□□□□ 0.64
RUNDC3A-201ENST00000225441 CCDC168Q8NDH2 2452 aa19.08■□□□□ 0.64
RUNDC3A-201ENST00000225441 ITPR3Q14573 2671 aa19.07■□□□□ 0.64
RUNDC3A-201ENST00000225441 IGHV4-4A0A075B6R2 117 aa19.07■□□□□ 0.64
RUNDC3A-201ENST00000225441 FGF6P10767 208 aa19.07■□□□□ 0.64
RUNDC3A-201ENST00000225441 SMIM15Q7Z3B0 74 aa19.07■□□□□ 0.64
RUNDC3A-201ENST00000225441 MEGF9Q9H1U4 602 aa19.07■□□□□ 0.64
RUNDC3A-201ENST00000225441 TRAV8-2A0A0B4J237 113 aa19.07■□□□□ 0.64
RUNDC3A-201ENST00000225441 MUC21A0A0G2JKD1 596 aa19.07■□□□□ 0.64
RUNDC3A-201ENST00000225441 MUC21A0A140T8X8 626 aa19.07■□□□□ 0.64
RUNDC3A-201ENST00000225441 CACNG7P62955 275 aa19.07■□□□□ 0.64
RUNDC3A-201ENST00000225441 MUC21Q5SSG8 566 aa19.07■□□□□ 0.64
RUNDC3A-201ENST00000225441 VAMP3Q15836 100 aa19.06■□□□□ 0.64
RUNDC3A-201ENST00000225441 TMEM97Q5BJF2 176 aa19.06■□□□□ 0.64
RUNDC3A-201ENST00000225441 IL17RELQ6ZVW7 336 aa19.06■□□□□ 0.64
RUNDC3A-201ENST00000225441 IGHV3-35A0A0C4DH35 117 aa19.05■□□□□ 0.64
RUNDC3A-201ENST00000225441 TNFRSF6BO95407 300 aa19.05■□□□□ 0.64
RUNDC3A-201ENST00000225441 FSHBP01225 129 aa19.05■□□□□ 0.64
RUNDC3A-201ENST00000225441 C8orf86Q6ZUL3 223 aa19.05■□□□□ 0.64
Retrieved 100 of 20,778 RNA–protein pairs in 12.9 ms