RNA–Protein interactions for RNA: ENST00000216211.8

UPK3A-201, Transcript of uroplakin 3A, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene UPK3A, Length 1,051 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPK3A-201ENST00000216211 NKX6-2Q9C056 277 aaPredicted RBP10.62□□□□□ -0.71
UPK3A-201ENST00000216211 TMEM167BQ9NRX6 74 aa10.62□□□□□ -0.71
UPK3A-201ENST00000216211 ARL2-SNX15V9GYD0 113 aa10.62□□□□□ -0.71
UPK3A-201ENST00000216211 DNAH11Q96DT5 4516 aa10.62□□□□□ -0.71
UPK3A-201ENST00000216211 TMEM250H0YL14 139 aa10.61□□□□□ -0.71
UPK3A-201ENST00000216211 HYPMO75409 117 aa10.61□□□□□ -0.71
UPK3A-201ENST00000216211 PRB4P10163 310 aaPredicted RBP10.61□□□□□ -0.71
UPK3A-201ENST00000216211 CLRN3Q8NCR9 226 aa10.61□□□□□ -0.71
UPK3A-201ENST00000216211 ZNF503Q96F45 646 aa10.61□□□□□ -0.71
UPK3A-201ENST00000216211 FAM167A-AS1Q96KT0 104 aa10.61□□□□□ -0.71
UPK3A-201ENST00000216211 UHRF2Q96PU4 802 aa10.61□□□□□ -0.71
UPK3A-201ENST00000216211 TRAV12-2A0A075B6T6 113 aa10.6□□□□□ -0.71
UPK3A-201ENST00000216211 RPL7P18124 248 aaKnown RBP10.6□□□□□ -0.71
UPK3A-201ENST00000216211 SLC25A2Q9BXI2 301 aa10.6□□□□□ -0.71
UPK3A-201ENST00000216211 F6UZH7 168 aa10.59□□□□□ -0.71
UPK3A-201ENST00000216211 PDE6DO43924 150 aa10.59□□□□□ -0.71
UPK3A-201ENST00000216211 HIST1H1AQ02539 215 aaPredicted RBP10.59□□□□□ -0.71
UPK3A-201ENST00000216211 RNF212Q495C1 297 aa10.59□□□□□ -0.71
UPK3A-201ENST00000216211 MORN5Q5VZ52 161 aa10.59□□□□□ -0.71
UPK3A-201ENST00000216211 Q6ZR54 194 aa10.59□□□□□ -0.71
UPK3A-201ENST00000216211 LINC00305Q7Z4B0 112 aa10.59□□□□□ -0.71
UPK3A-201ENST00000216211 A0A087X0K7 114 aa10.58□□□□□ -0.72
UPK3A-201ENST00000216211 TRAV5A0A0B4J249 113 aa10.58□□□□□ -0.72
UPK3A-201ENST00000216211 FAM74A7A6NL05 159 aa10.58□□□□□ -0.72
UPK3A-201ENST00000216211 LYRM9A8MSI8 78 aa10.58□□□□□ -0.72
UPK3A-201ENST00000216211 DEFB130BP0DP73 79 aa10.58□□□□□ -0.72
UPK3A-201ENST00000216211 DEFB130AP0DP74 79 aa10.58□□□□□ -0.72
UPK3A-201ENST00000216211 AZU1P20160 251 aa10.58□□□□□ -0.72
UPK3A-201ENST00000216211 PSG3Q16557 428 aa10.58□□□□□ -0.72
UPK3A-201ENST00000216211 FAM74A3Q4VXF1 159 aa10.58□□□□□ -0.72
UPK3A-201ENST00000216211 OR8A1Q8NGG7 326 aa10.58□□□□□ -0.72
UPK3A-201ENST00000216211 PLAC8L1A1L4L8 177 aa10.57□□□□□ -0.72
UPK3A-201ENST00000216211 H3BQ15 152 aa10.57□□□□□ -0.72
UPK3A-201ENST00000216211 OR7C2O60412 319 aa10.57□□□□□ -0.72
UPK3A-201ENST00000216211 ATP5G3P48201 142 aa10.57□□□□□ -0.72
UPK3A-201ENST00000216211 CEBPGP53567 150 aa10.57□□□□□ -0.72
UPK3A-201ENST00000216211 UBE2G2P60604 165 aa10.57□□□□□ -0.72
UPK3A-201ENST00000216211 BTN1A1Q13410 526 aa10.57□□□□□ -0.72
UPK3A-201ENST00000216211 CST9LP1Q5W188 147 aa10.57□□□□□ -0.72
UPK3A-201ENST00000216211 TVP23CQ96ET8 276 aa10.57□□□□□ -0.72
UPK3A-201ENST00000216211 PAXXQ9BUH6 204 aa10.57□□□□□ -0.72
UPK3A-201ENST00000216211 OR51M1Q9H341 326 aa10.57□□□□□ -0.72
UPK3A-201ENST00000216211 PPP1R14DQ9NXH3 145 aa10.57□□□□□ -0.72
UPK3A-201ENST00000216211 A0A1W2PRE2 83 aa10.56□□□□□ -0.72
UPK3A-201ENST00000216211 MRPS12O15235 138 aaKnown RBP10.56□□□□□ -0.72
UPK3A-201ENST00000216211 SNRPCP09234 159 aaKnown RBP10.56□□□□□ -0.72
UPK3A-201ENST00000216211 TSPOP30536 169 aa10.56□□□□□ -0.72
UPK3A-201ENST00000216211 RHEBQ15382 184 aa10.56□□□□□ -0.72
UPK3A-201ENST00000216211 S100A7AQ86SG5 101 aa10.56□□□□□ -0.72
UPK3A-201ENST00000216211 C15orf53Q8NAA6 179 aa10.56□□□□□ -0.72
UPK3A-201ENST00000216211 LINC01587Q99440 93 aa10.56□□□□□ -0.72
UPK3A-201ENST00000216211 C7orf77A4D0Y5 90 aa10.55□□□□□ -0.72
UPK3A-201ENST00000216211 ZNF727A8MUV8 499 aa10.55□□□□□ -0.72
UPK3A-201ENST00000216211 M0R036 132 aa10.55□□□□□ -0.72
UPK3A-201ENST00000216211 HTN1P15515 57 aa10.55□□□□□ -0.72
UPK3A-201ENST00000216211 PNRC1Q12796 327 aaPredicted RBP10.55□□□□□ -0.72
UPK3A-201ENST00000216211 C11orf52Q96A22 123 aa10.55□□□□□ -0.72
UPK3A-201ENST00000216211 RPUSD4Q96CM3 377 aaKnown RBP10.55□□□□□ -0.72
UPK3A-201ENST00000216211 FXYD5Q96DB9 178 aa10.55□□□□□ -0.72
UPK3A-201ENST00000216211 SDF2L1Q9HCN8 221 aa10.55□□□□□ -0.72
UPK3A-201ENST00000216211 TMEM14CQ9P0S9 112 aa10.55□□□□□ -0.72
UPK3A-201ENST00000216211 B4DEV8 164 aa10.54□□□□□ -0.72
UPK3A-201ENST00000216211 F5H768 121 aa10.54□□□□□ -0.72
UPK3A-201ENST00000216211 MED14OSP0DP75 135 aa10.54□□□□□ -0.72
UPK3A-201ENST00000216211 UBE2L3P68036 154 aaKnown RBP10.54□□□□□ -0.72
UPK3A-201ENST00000216211 TMEM256Q8N2U0 113 aa10.54□□□□□ -0.72
UPK3A-201ENST00000216211 SMIM7Q9BQ49 75 aa10.54□□□□□ -0.72
UPK3A-201ENST00000216211 ATG101Q9BSB4 218 aa10.54□□□□□ -0.72
UPK3A-201ENST00000216211 PARLQ9H300 379 aa10.54□□□□□ -0.72
UPK3A-201ENST00000216211 NAT8Q9UHE5 227 aa10.54□□□□□ -0.72
UPK3A-201ENST00000216211 MUC4Q99102 2169 aa10.53□□□□□ -0.72
UPK3A-201ENST00000216211 H3BTX0 84 aa10.53□□□□□ -0.72
UPK3A-201ENST00000216211 NUDT3O95989 172 aa10.53□□□□□ -0.72
UPK3A-201ENST00000216211 OR10J4P0C629 311 aa10.53□□□□□ -0.72
UPK3A-201ENST00000216211 PYYP10082 97 aa10.53□□□□□ -0.72
UPK3A-201ENST00000216211 CDKN1BP46527 198 aa10.53□□□□□ -0.72
UPK3A-201ENST00000216211 TAS2R60P59551 318 aa10.53□□□□□ -0.72
UPK3A-201ENST00000216211 TMEM241Q24JQ0 296 aa10.53□□□□□ -0.72
UPK3A-201ENST00000216211 C1orf134Q5TEV5 83 aa10.53□□□□□ -0.72
UPK3A-201ENST00000216211 ZNF331Q9NQX6 463 aaPredicted RBP10.53□□□□□ -0.72
UPK3A-201ENST00000216211 RNF24Q9Y225 148 aa10.53□□□□□ -0.72
UPK3A-201ENST00000216211 ABCA13Q86UQ4 5058 aa10.53□□□□□ -0.72
UPK3A-201ENST00000216211 A0A087WWC5 75 aa10.52□□□□□ -0.73
UPK3A-201ENST00000216211 SLC17A3O00476 420 aa10.52□□□□□ -0.73
UPK3A-201ENST00000216211 ATP5G1P05496 136 aa10.52□□□□□ -0.73
UPK3A-201ENST00000216211 FAM3BP58499 235 aaPredicted RBP10.52□□□□□ -0.73
UPK3A-201ENST00000216211 KIR3DS1Q14943 382 aa10.52□□□□□ -0.73
UPK3A-201ENST00000216211 BPIFA4PQ86YQ2 179 aa10.52□□□□□ -0.73
UPK3A-201ENST00000216211 C16orf74Q96GX8 76 aa10.52□□□□□ -0.73
UPK3A-201ENST00000216211 SLC50A1Q9BRV3 221 aa10.52□□□□□ -0.73
UPK3A-201ENST00000216211 RPS10P5Q9NQ39 176 aa10.52□□□□□ -0.73
UPK3A-201ENST00000216211 SMCO4Q9NRQ5 59 aa10.52□□□□□ -0.73
UPK3A-201ENST00000216211 SCO2A0A1W2PP80 73 aa10.51□□□□□ -0.73
UPK3A-201ENST00000216211 CBY3A6NI87 242 aa10.51□□□□□ -0.73
UPK3A-201ENST00000216211 NDUFB4O95168 129 aa10.51□□□□□ -0.73
UPK3A-201ENST00000216211 NBEAP1P0C6P0 100 aa10.51□□□□□ -0.73
UPK3A-201ENST00000216211 HIST1H1EP10412 219 aaKnown RBP10.51□□□□□ -0.73
UPK3A-201ENST00000216211 ZNF674Q2M3X9 581 aa10.51□□□□□ -0.73
UPK3A-201ENST00000216211 TCEAL7Q9BRU2 100 aa10.51□□□□□ -0.73
UPK3A-201ENST00000216211 TIMM8BQ9Y5J9 83 aaPredicted RBP10.51□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 86.2 ms