RNA–Protein interactions for RNA: ENST00000057513.7

TNIP3-201, Transcript of TNFAIP3 interacting protein 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene TNIP3, Length 2,416 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNIP3-201ENST00000057513 LINC01619G3V211 115 aa10.6□□□□□ -0.71
TNIP3-201ENST00000057513 RPL7P18124 248 aaKnown RBP10.6□□□□□ -0.71
TNIP3-201ENST00000057513 Q6ZS92 163 aa10.6□□□□□ -0.71
TNIP3-201ENST00000057513 NRACQ8N912 160 aa10.6□□□□□ -0.71
TNIP3-201ENST00000057513 PTH2Q96A98 100 aa10.6□□□□□ -0.71
TNIP3-201ENST00000057513 SMAD5-AS1Q9Y6J3 95 aa10.6□□□□□ -0.71
TNIP3-201ENST00000057513 LGALS1P09382 135 aaKnown RBP10.59□□□□□ -0.71
TNIP3-201ENST00000057513 COX7A1P24310 79 aa10.59□□□□□ -0.71
TNIP3-201ENST00000057513 SRSF8Q9BRL6 282 aaKnown RBP10.59□□□□□ -0.71
TNIP3-201ENST00000057513 LINC01549A6NIU2 74 aa10.59□□□□□ -0.71
TNIP3-201ENST00000057513 F8VRH5 84 aa10.59□□□□□ -0.71
TNIP3-201ENST00000057513 H7C1H1 209 aa10.59□□□□□ -0.71
TNIP3-201ENST00000057513 GATA3P23771 443 aa10.59□□□□□ -0.71
TNIP3-201ENST00000057513 PSMB2P49721 201 aa10.59□□□□□ -0.71
TNIP3-201ENST00000057513 DYNAPQ8N1N2 210 aa10.59□□□□□ -0.71
TNIP3-201ENST00000057513 CFHR4Q92496 578 aa10.59□□□□□ -0.71
TNIP3-201ENST00000057513 MAP1BP46821 2468 aaKnown RBP10.59□□□□□ -0.71
TNIP3-201ENST00000057513 LOC107984156A0A0G2JMH3 177 aa10.58□□□□□ -0.72
TNIP3-201ENST00000057513 F8W735 103 aaPredicted RBP10.58□□□□□ -0.72
TNIP3-201ENST00000057513 TSPAN13O95857 204 aa10.58□□□□□ -0.72
TNIP3-201ENST00000057513 ZFP2Q6ZN57 461 aa10.58□□□□□ -0.72
TNIP3-201ENST00000057513 ARL17AQ8IVW1 177 aa10.58□□□□□ -0.72
TNIP3-201ENST00000057513 RNF183Q96D59 192 aa10.58□□□□□ -0.72
TNIP3-201ENST00000057513 KAAG1Q9UBP8 84 aa10.58□□□□□ -0.72
TNIP3-201ENST00000057513 IGKV3D-20A0A0C4DH25 116 aa10.58□□□□□ -0.72
TNIP3-201ENST00000057513 LINC01548A6NM66 108 aa10.58□□□□□ -0.72
TNIP3-201ENST00000057513 PRAC2D3DTV9 90 aa10.58□□□□□ -0.72
TNIP3-201ENST00000057513 IGHV3-23P01764 117 aa10.58□□□□□ -0.72
TNIP3-201ENST00000057513 MFAP4P55083 255 aa10.58□□□□□ -0.72
TNIP3-201ENST00000057513 ADGRG4Q8IZF6 3080 aa10.58□□□□□ -0.72
TNIP3-201ENST00000057513 IL17RELQ6ZVW7 336 aa10.57□□□□□ -0.72
TNIP3-201ENST00000057513 CARD19Q96LW7 228 aa10.57□□□□□ -0.72
TNIP3-201ENST00000057513 FANCD2OSQ96PS1 177 aa10.57□□□□□ -0.72
TNIP3-201ENST00000057513 C11orf21Q9P2W6 132 aa10.57□□□□□ -0.72
TNIP3-201ENST00000057513 UFC1Q9Y3C8 167 aa10.57□□□□□ -0.72
TNIP3-201ENST00000057513 IGHV3OR16-8A0A075B7F1 116 aa10.57□□□□□ -0.72
TNIP3-201ENST00000057513 ZNF672Q499Z4 452 aaPredicted RBP10.57□□□□□ -0.72
TNIP3-201ENST00000057513 TMEM78Q5T7P6 136 aa10.57□□□□□ -0.72
TNIP3-201ENST00000057513 KLK15Q9H2R5 256 aa10.57□□□□□ -0.72
TNIP3-201ENST00000057513 ERG28Q9UKR5 140 aa10.57□□□□□ -0.72
TNIP3-201ENST00000057513 TRAV12-1A0A0B4J245 112 aa10.56□□□□□ -0.72
TNIP3-201ENST00000057513 TIMM23O14925 209 aa10.56□□□□□ -0.72
TNIP3-201ENST00000057513 IGFBPL1Q8WX77 278 aa10.56□□□□□ -0.72
TNIP3-201ENST00000057513 RNF5Q99942 180 aa10.56□□□□□ -0.72
TNIP3-201ENST00000057513 RAXQ9Y2V3 346 aa10.56□□□□□ -0.72
TNIP3-201ENST00000057513 IGLV11-55A0A075B6I3 123 aa10.55□□□□□ -0.72
TNIP3-201ENST00000057513 CDX4O14627 284 aaPredicted RBP10.55□□□□□ -0.72
TNIP3-201ENST00000057513 BSPH1Q075Z2 132 aa10.55□□□□□ -0.72
TNIP3-201ENST00000057513 PPDPFLQ8WWR9 84 aa10.55□□□□□ -0.72
TNIP3-201ENST00000057513 WNK2Q9Y3S1 2297 aa10.55□□□□□ -0.72
TNIP3-201ENST00000057513 A6NJY4 79 aa10.55□□□□□ -0.72
TNIP3-201ENST00000057513 UBE2D1P51668 147 aa10.55□□□□□ -0.72
TNIP3-201ENST00000057513 RNF182Q8N6D2 247 aa10.55□□□□□ -0.72
TNIP3-201ENST00000057513 PRADC1Q9BSG0 188 aa10.55□□□□□ -0.72
TNIP3-201ENST00000057513 C21orf62Q9NYP8 219 aa10.55□□□□□ -0.72
TNIP3-201ENST00000057513 IGHV3-35A0A0C4DH35 117 aa10.54□□□□□ -0.72
TNIP3-201ENST00000057513 NBR2O15453 112 aa10.54□□□□□ -0.72
TNIP3-201ENST00000057513 TEN1Q86WV5 123 aa10.54□□□□□ -0.72
TNIP3-201ENST00000057513 PLEKHB2Q96CS7 222 aa10.54□□□□□ -0.72
TNIP3-201ENST00000057513 SCGB3A1Q96QR1 104 aa10.54□□□□□ -0.72
TNIP3-201ENST00000057513 RALYQ9UKM9 306 aaKnown RBP10.54□□□□□ -0.72
TNIP3-201ENST00000057513 PCNX1Q96RV3 2341 aa10.54□□□□□ -0.72
TNIP3-201ENST00000057513 LAMA5O15230 3695 aa10.54□□□□□ -0.72
TNIP3-201ENST00000057513 IGHV7-4-1A0A0J9YVY3 117 aa10.54□□□□□ -0.72
TNIP3-201ENST00000057513 PRSS29PA6NIE9 313 aa10.54□□□□□ -0.72
TNIP3-201ENST00000057513 ZNF815PA8K554 130 aa10.54□□□□□ -0.72
TNIP3-201ENST00000057513 UBE2D3P61077 147 aa10.54□□□□□ -0.72
TNIP3-201ENST00000057513 UBE2D2P62837 147 aa10.54□□□□□ -0.72
TNIP3-201ENST00000057513 SRSF9Q13242 221 aaKnown RBP eCLIP10.54□□□□□ -0.72
TNIP3-201ENST00000057513 C5orf64Q2M2E5 130 aa10.54□□□□□ -0.72
TNIP3-201ENST00000057513 SCGB1D4Q6XE38 83 aa10.54□□□□□ -0.72
TNIP3-201ENST00000057513 LY6LH3BQJ8 138 aa10.53□□□□□ -0.72
TNIP3-201ENST00000057513 NEXN-AS1Q8NBZ9 246 aa10.53□□□□□ -0.72
TNIP3-201ENST00000057513 RNASE6Q93091 150 aaKnown RBP10.53□□□□□ -0.72
TNIP3-201ENST00000057513 VKORC1Q9BQB6 163 aa10.53□□□□□ -0.72
TNIP3-201ENST00000057513 SMIM2Q9BVW6 85 aa10.53□□□□□ -0.72
TNIP3-201ENST00000057513 SS18L2Q9UHA2 77 aa10.53□□□□□ -0.72
TNIP3-201ENST00000057513 POLEQ07864 2286 aa10.53□□□□□ -0.72
TNIP3-201ENST00000057513 CUL9Q8IWT3 2517 aa10.52□□□□□ -0.73
TNIP3-201ENST00000057513 CTSGP08311 255 aa10.52□□□□□ -0.73
TNIP3-201ENST00000057513 DEFB109BQ30KR1 87 aa10.52□□□□□ -0.73
TNIP3-201ENST00000057513 Q6ZQT7 251 aa10.52□□□□□ -0.73
TNIP3-201ENST00000057513 ANAPC13Q9BS18 74 aa10.52□□□□□ -0.73
TNIP3-201ENST00000057513 COLQQ9Y215 455 aaPredicted RBP10.52□□□□□ -0.73
TNIP3-201ENST00000057513 TCL1BO95988 128 aa10.52□□□□□ -0.73
TNIP3-201ENST00000057513 CD7P09564 240 aa10.52□□□□□ -0.73
TNIP3-201ENST00000057513 SLC25A16P16260 332 aa10.52□□□□□ -0.73
TNIP3-201ENST00000057513 SPANXN1Q5VSR9 72 aa10.52□□□□□ -0.73
TNIP3-201ENST00000057513 ONECUT1Q9UBC0 465 aa10.52□□□□□ -0.73
TNIP3-201ENST00000057513 KLHL30-AS1Q8NEE0 82 aa10.51□□□□□ -0.73
TNIP3-201ENST00000057513 OR11H6Q8NGC7 330 aa10.51□□□□□ -0.73
TNIP3-201ENST00000057513 TOMM6Q96B49 74 aa10.51□□□□□ -0.73
TNIP3-201ENST00000057513 KIR2DL4Q99706 377 aa10.51□□□□□ -0.73
TNIP3-201ENST00000057513 AGPAT4-IT1Q9H0P7 198 aa10.51□□□□□ -0.73
TNIP3-201ENST00000057513 DYNLRB1Q9NP97 96 aa10.51□□□□□ -0.73
TNIP3-201ENST00000057513 CNOT1A5YKK6 2376 aaKnown RBP10.5□□□□□ -0.73
TNIP3-201ENST00000057513 LYNX1G3V0Z9 82 aa10.5□□□□□ -0.73
TNIP3-201ENST00000057513 TGFAP01135 160 aa10.5□□□□□ -0.73
TNIP3-201ENST00000057513 ZNF688P0C7X2 276 aa10.5□□□□□ -0.73
TNIP3-201ENST00000057513 LYNX1P0DP58 116 aa10.5□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 47.2 ms