RNA–Protein interactions for RNA: ENSMUST00000033088.7

Rnf40-201, Transcript of E3 ubiquitin-protein ligase BRE1B, mousemouse

TSL 5 BASIC

Gene Rnf40, Length 3,906 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf40-201ENSMUST00000033088 Obp2aQ8K1H9 176 aa9.06□□□□□ -0.96
Rnf40-201ENSMUST00000033088 Chchd2Q9D1L0 153 aa9.06□□□□□ -0.96
Rnf40-201ENSMUST00000033088 Kcnip2Q9JJ69 270 aa9.06□□□□□ -0.96
Rnf40-201ENSMUST00000033088 Ube2l6Q9QZU9 153 aa9.06□□□□□ -0.96
Rnf40-201ENSMUST00000033088 Nav3Q80TN7 2359 aa9.06□□□□□ -0.96
Rnf40-201ENSMUST00000033088 Prune2Q52KR3 3084 aa9.06□□□□□ -0.96
Rnf40-201ENSMUST00000033088 Ep300B2RWS6 2412 aa9.05□□□□□ -0.96
Rnf40-201ENSMUST00000033088 Ighg2cF6TQW2 404 aa9.05□□□□□ -0.96
Rnf40-201ENSMUST00000033088 Klf12O35738 402 aa9.05□□□□□ -0.96
Rnf40-201ENSMUST00000033088 P01787 123 aa9.05□□□□□ -0.96
Rnf40-201ENSMUST00000033088 P01864 335 aa9.05□□□□□ -0.96
Rnf40-201ENSMUST00000033088 H2-Ab1P01921 265 aa9.05□□□□□ -0.96
Rnf40-201ENSMUST00000033088 P06344 263 aa9.05□□□□□ -0.96
Rnf40-201ENSMUST00000033088 Guca2aP33680 116 aa9.05□□□□□ -0.96
Rnf40-201ENSMUST00000033088 Pafah1b2Q61206 229 aa9.05□□□□□ -0.96
Rnf40-201ENSMUST00000033088 Olfr93Q6UAH1 312 aa9.05□□□□□ -0.96
Rnf40-201ENSMUST00000033088 Olfr91Q7TRL3 312 aa9.05□□□□□ -0.96
Rnf40-201ENSMUST00000033088 Q8BTC1 67 aa9.05□□□□□ -0.96
Rnf40-201ENSMUST00000033088 Gtf2h5Q8K2X8 71 aa9.05□□□□□ -0.96
Rnf40-201ENSMUST00000033088 Smim8Q9CQQ0 97 aa9.05□□□□□ -0.96
Rnf40-201ENSMUST00000033088 Wbp2nlQ9D529 359 aa9.05□□□□□ -0.96
Rnf40-201ENSMUST00000033088 Alkbh4Q9D8F1 300 aa9.05□□□□□ -0.96
Rnf40-201ENSMUST00000033088 Phf7Q9DAG9 307 aa9.05□□□□□ -0.96
Rnf40-201ENSMUST00000033088 Q9DAN9 164 aa9.05□□□□□ -0.96
Rnf40-201ENSMUST00000033088 Spg11Q3UHA3 2430 aa9.05□□□□□ -0.96
Rnf40-201ENSMUST00000033088 Esp38A8R0X1 80 aa9.05□□□□□ -0.96
Rnf40-201ENSMUST00000033088 Vmn1r224E9PWK2 298 aa9.05□□□□□ -0.96
Rnf40-201ENSMUST00000033088 P01746 140 aa9.05□□□□□ -0.96
Rnf40-201ENSMUST00000033088 PpicP30412 212 aaKnown RBP9.05□□□□□ -0.96
Rnf40-201ENSMUST00000033088 Taar9Q5QD04 348 aa9.05□□□□□ -0.96
Rnf40-201ENSMUST00000033088 Spred3Q6P6N5 408 aa9.05□□□□□ -0.96
Rnf40-201ENSMUST00000033088 Olfr94Q6UAH0 386 aa9.05□□□□□ -0.96
Rnf40-201ENSMUST00000033088 9430097D07RikQ8BS47 195 aa9.05□□□□□ -0.96
Rnf40-201ENSMUST00000033088 Ptrh2Q8R2Y8 181 aaKnown RBP9.05□□□□□ -0.96
Rnf40-201ENSMUST00000033088 Gtf3aQ8VHT7 364 aa9.05□□□□□ -0.96
Rnf40-201ENSMUST00000033088 Mrpl51Q9CPY1 128 aa9.05□□□□□ -0.96
Rnf40-201ENSMUST00000033088 Lyrm7Q9DA03 104 aa9.05□□□□□ -0.96
Rnf40-201ENSMUST00000033088 Cml1Q9JIZ0 222 aa9.05□□□□□ -0.96
Rnf40-201ENSMUST00000033088 Crim1Q9JLL0 1037 aa9.05□□□□□ -0.96
Rnf40-201ENSMUST00000033088 Tnfsf14Q9QYH9 239 aa9.05□□□□□ -0.96
Rnf40-201ENSMUST00000033088 Aifm1Q9Z0X1 612 aa9.05□□□□□ -0.96
Rnf40-201ENSMUST00000033088 Trbv26A0A0B4J1P5 115 aa9.05□□□□□ -0.96
Rnf40-201ENSMUST00000033088 Gm21913J3KML9 361 aa9.05□□□□□ -0.96
Rnf40-201ENSMUST00000033088 Gm21776J3QPJ5 361 aa9.05□□□□□ -0.96
Rnf40-201ENSMUST00000033088 Cnih1O35372 144 aa9.05□□□□□ -0.96
Rnf40-201ENSMUST00000033088 Tnfrsf9P20334 256 aa9.05□□□□□ -0.96
Rnf40-201ENSMUST00000033088 UcnP81615 122 aa9.05□□□□□ -0.96
Rnf40-201ENSMUST00000033088 Tex52Q3TTI8 308 aa9.05□□□□□ -0.96
Rnf40-201ENSMUST00000033088 Tmprss12Q3V0Q7 336 aa9.05□□□□□ -0.96
Rnf40-201ENSMUST00000033088 Defa24Q5G865 93 aa9.05□□□□□ -0.96
Rnf40-201ENSMUST00000033088 Sap30lQ5SQF8 182 aa9.05□□□□□ -0.96
Rnf40-201ENSMUST00000033088 Mex3bQ69Z36 601 aaKnown RBP9.05□□□□□ -0.96
Rnf40-201ENSMUST00000033088 Gpr6Q6YNI2 363 aa9.05□□□□□ -0.96
Rnf40-201ENSMUST00000033088 Olfr823Q7TRH2 315 aa9.05□□□□□ -0.96
Rnf40-201ENSMUST00000033088 Q8C3M9 231 aa9.05□□□□□ -0.96
Rnf40-201ENSMUST00000033088 Olfr1260Q8VGN9 310 aa9.05□□□□□ -0.96
Rnf40-201ENSMUST00000033088 Tmem70Q921N7 253 aa9.05□□□□□ -0.96
Rnf40-201ENSMUST00000033088 Mrpl27Q99N92 148 aa9.05□□□□□ -0.96
Rnf40-201ENSMUST00000033088 Pnrc2Q9CR73 140 aa9.05□□□□□ -0.96
Rnf40-201ENSMUST00000033088 Zfpl1Q9DB43 310 aa9.05□□□□□ -0.96
Rnf40-201ENSMUST00000033088 Anapc1P53995 1944 aaKnown RBP9.05□□□□□ -0.96
Rnf40-201ENSMUST00000033088 Rpl8P62918 257 aaKnown RBP9.04□□□□□ -0.96
Rnf40-201ENSMUST00000033088 Gm10912Q3UXH0 145 aa9.04□□□□□ -0.96
Rnf40-201ENSMUST00000033088 Vgll4Q80V24 287 aa9.04□□□□□ -0.96
Rnf40-201ENSMUST00000033088 Tnfrsf13cQ9D8D0 175 aa9.04□□□□□ -0.96
Rnf40-201ENSMUST00000033088 Barx1Q9ER42 254 aa9.04□□□□□ -0.96
Rnf40-201ENSMUST00000033088 Suclg1Q9WUM5 346 aaKnown RBP9.04□□□□□ -0.96
Rnf40-201ENSMUST00000033088 Fgf5P15656 264 aa9.04□□□□□ -0.96
Rnf40-201ENSMUST00000033088 Rac1P63001 192 aa9.04□□□□□ -0.96
Rnf40-201ENSMUST00000033088 CebpdQ00322 268 aa9.04□□□□□ -0.96
Rnf40-201ENSMUST00000033088 Ceacam9Q78T27 234 aa9.04□□□□□ -0.96
Rnf40-201ENSMUST00000033088 Lhfpl2Q8BGA2 222 aa9.04□□□□□ -0.96
Rnf40-201ENSMUST00000033088 Rab11fip5Q8R361 645 aa9.04□□□□□ -0.96
Rnf40-201ENSMUST00000033088 Dtx2Q8R3P2 619 aa9.04□□□□□ -0.96
Rnf40-201ENSMUST00000033088 Cldn16Q925N4 235 aa9.04□□□□□ -0.96
Rnf40-201ENSMUST00000033088 Derl1Q99J56 251 aa9.04□□□□□ -0.96
Rnf40-201ENSMUST00000033088 Smdt1Q9DB10 107 aa9.04□□□□□ -0.96
Rnf40-201ENSMUST00000033088 Rarres2Q9DD06 162 aa9.04□□□□□ -0.96
Rnf40-201ENSMUST00000033088 Hdgfl3Q9JMG7 202 aa9.04□□□□□ -0.96
Rnf40-201ENSMUST00000033088 Lsm4Q9QXA5 137 aaKnown RBP9.04□□□□□ -0.96
Rnf40-201ENSMUST00000033088 Opn4Q9QXZ9 521 aa9.04□□□□□ -0.96
Rnf40-201ENSMUST00000033088 Hivep3A2A884 2348 aa9.04□□□□□ -0.96
Rnf40-201ENSMUST00000033088 Gm14124A2AU83 715 aa9.04□□□□□ -0.96
Rnf40-201ENSMUST00000033088 Gm17677B3GLJ5 116 aa9.04□□□□□ -0.96
Rnf40-201ENSMUST00000033088 Olfr898L7N1Z5 316 aa9.04□□□□□ -0.96
Rnf40-201ENSMUST00000033088 Phxr2P15972 65 aa9.04□□□□□ -0.96
Rnf40-201ENSMUST00000033088 Evi2aP20934 223 aa9.04□□□□□ -0.96
Rnf40-201ENSMUST00000033088 Pcp4P63054 62 aa9.04□□□□□ -0.96
Rnf40-201ENSMUST00000033088 Q497N7 227 aa9.04□□□□□ -0.96
Rnf40-201ENSMUST00000033088 Try10Q792Z1 246 aaKnown RBP9.04□□□□□ -0.96
Rnf40-201ENSMUST00000033088 Fam174bQ8K064 153 aa9.04□□□□□ -0.96
Rnf40-201ENSMUST00000033088 Coa3Q9D2R6 108 aa9.04□□□□□ -0.96
Rnf40-201ENSMUST00000033088 ApooQ9DCZ4 198 aa9.04□□□□□ -0.96
Rnf40-201ENSMUST00000033088 P01788 123 aa9.03□□□□□ -0.96
Rnf40-201ENSMUST00000033088 Plp1P60202 277 aa9.03□□□□□ -0.96
Rnf40-201ENSMUST00000033088 MiaQ61865 130 aa9.03□□□□□ -0.96
Rnf40-201ENSMUST00000033088 BtlaQ7TSA3 306 aa9.03□□□□□ -0.96
Rnf40-201ENSMUST00000033088 Olfr1370Q8VFG4 316 aa9.03□□□□□ -0.96
Rnf40-201ENSMUST00000033088 Ms4a6cQ99N08 217 aa9.03□□□□□ -0.96
Rnf40-201ENSMUST00000033088 Dram1Q9DC58 238 aa9.03□□□□□ -0.96
Retrieved 100 of 22,080 RNA–protein pairs in 37.2 ms