RNA–Protein interactions for RNA: ENST00000641927.1

PHGDH-230, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 1,678 nt, Biotype processed transcript, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-230ENST00000641927 RPL35P42766 123 aaKnown RBP12.96□□□□□ -0.34
PHGDH-230ENST00000641927 PRNTQ86SH4 94 aa12.96□□□□□ -0.34
PHGDH-230ENST00000641927 DEFB125Q8N687 156 aa12.96□□□□□ -0.34
PHGDH-230ENST00000641927 C19orf73Q9NVV2 129 aa12.96□□□□□ -0.34
PHGDH-230ENST00000641927 SFTA3P0C7M3 94 aa12.95□□□□□ -0.34
PHGDH-230ENST00000641927 STHQ8IWL8 128 aa12.95□□□□□ -0.34
PHGDH-230ENST00000641927 TMEM75Q8N9X5 138 aa12.95□□□□□ -0.34
PHGDH-230ENST00000641927 Q8TAT8 98 aa12.95□□□□□ -0.34
PHGDH-230ENST00000641927 FMC1Q96HJ9 113 aa12.95□□□□□ -0.34
PHGDH-230ENST00000641927 ASCL2Q99929 193 aa12.95□□□□□ -0.34
PHGDH-230ENST00000641927 AGPAT4-IT1Q9H0P7 198 aa12.95□□□□□ -0.34
PHGDH-230ENST00000641927 PARLQ9H300 379 aa12.95□□□□□ -0.34
PHGDH-230ENST00000641927 PPP1R14DQ9NXH3 145 aa12.95□□□□□ -0.34
PHGDH-230ENST00000641927 DUSP14O95147 198 aaKnown RBP12.94□□□□□ -0.34
PHGDH-230ENST00000641927 HLA-DRB4P13762 266 aa12.94□□□□□ -0.34
PHGDH-230ENST00000641927 FLI1Q01543 452 aaPredicted RBP12.94□□□□□ -0.34
PHGDH-230ENST00000641927 TMEM183BQ1AE95 376 aa12.94□□□□□ -0.34
PHGDH-230ENST00000641927 C9orf47Q6ZRZ4 202 aa12.94□□□□□ -0.34
PHGDH-230ENST00000641927 HLA-DRB4X5D2U9 266 aa12.94□□□□□ -0.34
PHGDH-230ENST00000641927 NPIPB6E9PJ23 425 aa12.93□□□□□ -0.34
PHGDH-230ENST00000641927 H3BMM0 161 aa12.93□□□□□ -0.34
PHGDH-230ENST00000641927 NDUFS6O75380 124 aaKnown RBP12.93□□□□□ -0.34
PHGDH-230ENST00000641927 LINC00477Q96M19 166 aa12.93□□□□□ -0.34
PHGDH-230ENST00000641927 PSG8Q9UQ74 426 aa12.93□□□□□ -0.34
PHGDH-230ENST00000641927 TMEM218A2RU14 115 aa12.93□□□□□ -0.34
PHGDH-230ENST00000641927 IGLV2-11P01706 119 aa12.93□□□□□ -0.34
PHGDH-230ENST00000641927 S100A9P06702 114 aaKnown RBP12.93□□□□□ -0.34
PHGDH-230ENST00000641927 ZNF138P52744 262 aa12.93□□□□□ -0.34
PHGDH-230ENST00000641927 SOHLH1Q5JUK2 328 aa12.93□□□□□ -0.34
PHGDH-230ENST00000641927 Q8N1Y9 231 aa12.93□□□□□ -0.34
PHGDH-230ENST00000641927 SMIM7Q9BQ49 75 aa12.93□□□□□ -0.34
PHGDH-230ENST00000641927 KLF12Q9Y4X4 402 aa12.93□□□□□ -0.34
PHGDH-230ENST00000641927 ZNF727A8MUV8 499 aa12.92□□□□□ -0.34
PHGDH-230ENST00000641927 Q86TA4 180 aa12.92□□□□□ -0.34
PHGDH-230ENST00000641927 SRD5A3Q9H8P0 318 aa12.92□□□□□ -0.34
PHGDH-230ENST00000641927 FBLL1A6NHQ2 334 aaKnown RBP12.91□□□□□ -0.34
PHGDH-230ENST00000641927 CT45A10P0DMU9 189 aa12.91□□□□□ -0.34
PHGDH-230ENST00000641927 GNG4P50150 75 aa12.91□□□□□ -0.34
PHGDH-230ENST00000641927 CENPWQ5EE01 88 aa12.91□□□□□ -0.34
PHGDH-230ENST00000641927 NDFIP1Q9BT67 221 aa12.91□□□□□ -0.34
PHGDH-230ENST00000641927 ZNF492Q9P255 531 aa12.91□□□□□ -0.34
PHGDH-230ENST00000641927 AGRNO00468 2067 aa12.9□□□□□ -0.34
PHGDH-230ENST00000641927 RPL35AP18077 110 aaKnown RBP12.9□□□□□ -0.34
PHGDH-230ENST00000641927 TAS2R60P59551 318 aa12.9□□□□□ -0.34
PHGDH-230ENST00000641927 BAGE2Q86Y30 109 aa12.9□□□□□ -0.34
PHGDH-230ENST00000641927 NHLRC2Q8NBF2 726 aa12.9□□□□□ -0.34
PHGDH-230ENST00000641927 TUBA4BQ9H853 241 aa12.9□□□□□ -0.34
PHGDH-230ENST00000641927 MGAM2Q2M2H8 2515 aa12.9□□□□□ -0.35
PHGDH-230ENST00000641927 J3KRW8 73 aa12.89□□□□□ -0.35
PHGDH-230ENST00000641927 TRPT1Q86TN4 253 aaKnown RBP12.89□□□□□ -0.35
PHGDH-230ENST00000641927 F8W036 122 aa12.89□□□□□ -0.35
PHGDH-230ENST00000641927 LTAP01374 205 aa12.89□□□□□ -0.35
PHGDH-230ENST00000641927 PRB2P02812 416 aaPredicted RBP12.89□□□□□ -0.35
PHGDH-230ENST00000641927 FXYD7P58549 80 aa12.89□□□□□ -0.35
PHGDH-230ENST00000641927 IGF2BP2-AS1Q96M15 143 aa12.89□□□□□ -0.35
PHGDH-230ENST00000641927 TRBV20OR9-2A0A075B6H5 130 aa12.88□□□□□ -0.35
PHGDH-230ENST00000641927 RBMY1BA6NDE4 496 aaKnown RBP12.88□□□□□ -0.35
PHGDH-230ENST00000641927 RBMY1EA6NEQ0 496 aaKnown RBP12.88□□□□□ -0.35
PHGDH-230ENST00000641927 PGPEP1LA6NFU8 196 aa12.88□□□□□ -0.35
PHGDH-230ENST00000641927 RBMY1DP0C7P1 496 aaKnown RBP12.88□□□□□ -0.35
PHGDH-230ENST00000641927 FAM74A3Q4VXF1 159 aa12.88□□□□□ -0.35
PHGDH-230ENST00000641927 SAPCD1Q5SSQ6 148 aa12.88□□□□□ -0.35
PHGDH-230ENST00000641927 TVP23CQ96ET8 276 aa12.88□□□□□ -0.35
PHGDH-230ENST00000641927 SEC11CQ9BY50 192 aa12.88□□□□□ -0.35
PHGDH-230ENST00000641927 AURKAIP1Q9NWT8 199 aaPredicted RBP12.88□□□□□ -0.35
PHGDH-230ENST00000641927 ZFP30Q9Y2G7 519 aa12.88□□□□□ -0.35
PHGDH-230ENST00000641927 TRBV6-1A0A0K0K1D8 114 aa12.87□□□□□ -0.35
PHGDH-230ENST00000641927 M0R2Z0 102 aa12.87□□□□□ -0.35
PHGDH-230ENST00000641927 NUTF2P61970 127 aaKnown RBP12.87□□□□□ -0.35
PHGDH-230ENST00000641927 SPINK13Q1W4C9 94 aa12.87□□□□□ -0.35
PHGDH-230ENST00000641927 KPRPQ5T749 579 aaPredicted RBP12.87□□□□□ -0.35
PHGDH-230ENST00000641927 C8orf49Q96NF6 230 aa12.87□□□□□ -0.35
PHGDH-230ENST00000641927 C9JCJ5 164 aa12.86□□□□□ -0.35
PHGDH-230ENST00000641927 IGHV4-30-4P0DP06 118 aa12.86□□□□□ -0.35
PHGDH-230ENST00000641927 MGST1P10620 155 aaKnown RBP12.86□□□□□ -0.35
PHGDH-230ENST00000641927 ADCYAP1P18509 176 aa12.86□□□□□ -0.35
PHGDH-230ENST00000641927 TSPOP30536 169 aa12.86□□□□□ -0.35
PHGDH-230ENST00000641927 LEPP41159 167 aa12.86□□□□□ -0.35
PHGDH-230ENST00000641927 C10orf91Q5T1B1 145 aa12.86□□□□□ -0.35
PHGDH-230ENST00000641927 AMTNQ6UX39 209 aa12.86□□□□□ -0.35
PHGDH-230ENST00000641927 ODF3Q96PU9 254 aa12.86□□□□□ -0.35
PHGDH-230ENST00000641927 NIPSNAP3BQ9BS92 247 aa12.86□□□□□ -0.35
PHGDH-230ENST00000641927 LENEPQ9Y5L5 61 aa12.86□□□□□ -0.35
PHGDH-230ENST00000641927 GPX1P07203 203 aa12.86□□□□□ -0.35
PHGDH-230ENST00000641927 TMEM241Q24JQ0 296 aa12.86□□□□□ -0.35
PHGDH-230ENST00000641927 TMEM183AQ8IXX5 376 aa12.86□□□□□ -0.35
PHGDH-230ENST00000641927 CARHSP1Q9Y2V2 147 aaKnown RBP12.86□□□□□ -0.35
PHGDH-230ENST00000641927 TRAV12-2A0A075B6T6 113 aa12.85□□□□□ -0.35
PHGDH-230ENST00000641927 A8MTW9 85 aa12.85□□□□□ -0.35
PHGDH-230ENST00000641927 APOC3P02656 99 aa12.85□□□□□ -0.35
PHGDH-230ENST00000641927 CDKN1BP46527 198 aa12.85□□□□□ -0.35
PHGDH-230ENST00000641927 FAM19A4Q96LR4 140 aa12.85□□□□□ -0.35
PHGDH-230ENST00000641927 CLUHP3Q96NS8 147 aa12.85□□□□□ -0.35
PHGDH-230ENST00000641927 NAT8Q9UHE5 227 aa12.85□□□□□ -0.35
PHGDH-230ENST00000641927 NOTCH1P46531 2555 aa12.84□□□□□ -0.35
PHGDH-230ENST00000641927 LOC102724200A0A096LPH7 203 aaPredicted RBP12.84□□□□□ -0.35
PHGDH-230ENST00000641927 RNASE4P34096 147 aaKnown RBP12.84□□□□□ -0.35
PHGDH-230ENST00000641927 KIR3DS1Q14943 382 aa12.84□□□□□ -0.35
PHGDH-230ENST00000641927 SMUG1Q53HV7 270 aa12.84□□□□□ -0.35
PHGDH-230ENST00000641927 PRR27Q6MZM9 219 aa12.84□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms