RNA–Protein interactions for RNA: ENST00000641587.1

PHGDH-222, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 566 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-222ENST00000641587 PGPA6NDG6 321 aa7.29□□□□□ -1.24
PHGDH-222ENST00000641587 OR4C46A6NHA9 309 aa7.29□□□□□ -1.24
PHGDH-222ENST00000641587 GGTLC3B5MD39 225 aa7.29□□□□□ -1.24
PHGDH-222ENST00000641587 IGLL5B9A064 214 aa7.29□□□□□ -1.24
PHGDH-222ENST00000641587 NDUFB4O95168 129 aa7.29□□□□□ -1.24
PHGDH-222ENST00000641587 ID1P41134 155 aa7.29□□□□□ -1.24
PHGDH-222ENST00000641587 CEBPGP53567 150 aa7.29□□□□□ -1.24
PHGDH-222ENST00000641587 SUMO1P63165 101 aaKnown RBP7.29□□□□□ -1.24
PHGDH-222ENST00000641587 MEF2BQ02080 365 aaPredicted RBP7.29□□□□□ -1.24
PHGDH-222ENST00000641587 ICAM4Q14773 271 aa7.29□□□□□ -1.24
PHGDH-222ENST00000641587 PEA15Q15121 130 aa7.29□□□□□ -1.24
PHGDH-222ENST00000641587 ZNF506Q5JVG8 444 aa7.29□□□□□ -1.24
PHGDH-222ENST00000641587 SAMD13Q5VXD3 122 aa7.29□□□□□ -1.24
PHGDH-222ENST00000641587 FAM90A2PQ658T7 463 aa7.29□□□□□ -1.24
PHGDH-222ENST00000641587 IGFL4Q6B9Z1 124 aa7.29□□□□□ -1.24
PHGDH-222ENST00000641587 EXOC3-AS1Q8N2X6 119 aa7.29□□□□□ -1.24
PHGDH-222ENST00000641587 RNF182Q8N6D2 247 aa7.29□□□□□ -1.24
PHGDH-222ENST00000641587 C2CD4CQ8TF44 421 aa7.29□□□□□ -1.24
PHGDH-222ENST00000641587 LINC00052Q96N35 136 aa7.29□□□□□ -1.24
PHGDH-222ENST00000641587 CSTL1Q9H114 145 aa7.29□□□□□ -1.24
PHGDH-222ENST00000641587 C11orf68Q9H3H3 251 aaKnown RBP7.29□□□□□ -1.24
PHGDH-222ENST00000641587 TREM1Q9NP99 234 aa7.29□□□□□ -1.24
PHGDH-222ENST00000641587 ZNF331Q9NQX6 463 aaPredicted RBP7.29□□□□□ -1.24
PHGDH-222ENST00000641587 APLNQ9ULZ1 77 aa7.29□□□□□ -1.24
PHGDH-222ENST00000641587 HSPG2P98160 4391 aa7.28□□□□□ -1.24
PHGDH-222ENST00000641587 A0A1B0GVY2 172 aa7.28□□□□□ -1.24
PHGDH-222ENST00000641587 RAB19A4D1S5 217 aa7.28□□□□□ -1.24
PHGDH-222ENST00000641587 ISLRO14498 428 aa7.28□□□□□ -1.24
PHGDH-222ENST00000641587 ZNF253O75346 499 aa7.28□□□□□ -1.24
PHGDH-222ENST00000641587 CA1P00915 261 aaPredicted RBP7.28□□□□□ -1.24
PHGDH-222ENST00000641587 ZNF688P0C7X2 276 aa7.28□□□□□ -1.24
PHGDH-222ENST00000641587 HLA-DMBP28068 263 aa7.28□□□□□ -1.24
PHGDH-222ENST00000641587 CSN1S1P47710 185 aa7.28□□□□□ -1.24
PHGDH-222ENST00000641587 SNRPD3P62318 126 aaKnown RBP7.28□□□□□ -1.24
PHGDH-222ENST00000641587 NDUFA5Q16718 116 aa7.28□□□□□ -1.24
PHGDH-222ENST00000641587 LYPD1Q8N2G4 141 aa7.28□□□□□ -1.24
PHGDH-222ENST00000641587 ZNF738Q8NE65 137 aa7.28□□□□□ -1.24
PHGDH-222ENST00000641587 NKX6-2Q9C056 277 aaPredicted RBP7.28□□□□□ -1.24
PHGDH-222ENST00000641587 MED9Q9NWA0 146 aa7.28□□□□□ -1.24
PHGDH-222ENST00000641587 F6UZH7 168 aa7.27□□□□□ -1.25
PHGDH-222ENST00000641587 K7EQG2 157 aa7.27□□□□□ -1.25
PHGDH-222ENST00000641587 PRB4P10163 310 aaPredicted RBP7.27□□□□□ -1.25
PHGDH-222ENST00000641587 GNG5P63218 68 aa7.27□□□□□ -1.25
PHGDH-222ENST00000641587 SRSF3P84103 164 aaKnown RBP7.27□□□□□ -1.25
PHGDH-222ENST00000641587 PSMG4Q5JS54 123 aa7.27□□□□□ -1.25
PHGDH-222ENST00000641587 C5orf17Q8NAS9 161 aa7.27□□□□□ -1.25
PHGDH-222ENST00000641587 TXNDC17Q9BRA2 123 aa7.27□□□□□ -1.25
PHGDH-222ENST00000641587 PRELID1Q9Y255 219 aa7.27□□□□□ -1.25
PHGDH-222ENST00000641587 AGRNO00468 2067 aa7.27□□□□□ -1.25
PHGDH-222ENST00000641587 TRAV2A0A0B4J234 112 aa7.26□□□□□ -1.25
PHGDH-222ENST00000641587 TRAV8-2A0A0B4J237 113 aa7.26□□□□□ -1.25
PHGDH-222ENST00000641587 SCO2A0A1W2PP80 73 aa7.26□□□□□ -1.25
PHGDH-222ENST00000641587 M0R3E3 92 aa7.26□□□□□ -1.25
PHGDH-222ENST00000641587 SOCS3O14543 225 aa7.26□□□□□ -1.25
PHGDH-222ENST00000641587 PDE6DO43924 150 aa7.26□□□□□ -1.25
PHGDH-222ENST00000641587 AKR1C3P42330 323 aa7.26□□□□□ -1.25
PHGDH-222ENST00000641587 PSG3Q16557 428 aa7.26□□□□□ -1.25
PHGDH-222ENST00000641587 GOLT1AQ6ZVE7 132 aa7.26□□□□□ -1.25
PHGDH-222ENST00000641587 SLC7A5P1Q8MH63 180 aa7.26□□□□□ -1.25
PHGDH-222ENST00000641587 FAM24BQ8N5W8 94 aa7.26□□□□□ -1.25
PHGDH-222ENST00000641587 Q8NAQ8 132 aa7.26□□□□□ -1.25
PHGDH-222ENST00000641587 DCANP1Q8TF63 244 aa7.26□□□□□ -1.25
PHGDH-222ENST00000641587 RPUSD4Q96CM3 377 aaKnown RBP7.26□□□□□ -1.25
PHGDH-222ENST00000641587 C20orf173Q96LM9 149 aa7.26□□□□□ -1.25
PHGDH-222ENST00000641587 CLEC5AQ9NY25 188 aa7.26□□□□□ -1.25
PHGDH-222ENST00000641587 EPDR1Q9UM22 224 aa7.26□□□□□ -1.25
PHGDH-222ENST00000641587 IGKV2-40A0A087WW87 121 aaPredicted RBP7.25□□□□□ -1.25
PHGDH-222ENST00000641587 ZNF705FA8MVS1 300 aaPredicted RBP7.25□□□□□ -1.25
PHGDH-222ENST00000641587 K7EQM0 130 aa7.25□□□□□ -1.25
PHGDH-222ENST00000641587 PEX7O00628 323 aa7.25□□□□□ -1.25
PHGDH-222ENST00000641587 IGKV2D-40P01614 121 aaPredicted RBP7.25□□□□□ -1.25
PHGDH-222ENST00000641587 RBMY1A1P0DJD3 496 aaKnown RBP7.25□□□□□ -1.25
PHGDH-222ENST00000641587 RBMY1CP0DJD4 496 aa7.25□□□□□ -1.25
PHGDH-222ENST00000641587 CNN1P51911 297 aaKnown RBP7.25□□□□□ -1.25
PHGDH-222ENST00000641587 RBMY1FQ15415 496 aaKnown RBP7.25□□□□□ -1.25
PHGDH-222ENST00000641587 ZNF674Q2M3X9 581 aa7.25□□□□□ -1.25
PHGDH-222ENST00000641587 UQCC3Q6UW78 93 aa7.25□□□□□ -1.25
PHGDH-222ENST00000641587 Q6ZTC4 211 aa7.25□□□□□ -1.25
PHGDH-222ENST00000641587 MRPL53Q96EL3 112 aaKnown RBP7.25□□□□□ -1.25
PHGDH-222ENST00000641587 TCEAL7Q9BRU2 100 aa7.25□□□□□ -1.25
PHGDH-222ENST00000641587 ATG101Q9BSB4 218 aa7.25□□□□□ -1.25
PHGDH-222ENST00000641587 KRTAP4-5Q9BYR2 181 aa7.25□□□□□ -1.25
PHGDH-222ENST00000641587 IGHV4-4A0A075B6R2 117 aa7.24□□□□□ -1.25
PHGDH-222ENST00000641587 TCRAP04437 139 aa7.24□□□□□ -1.25
PHGDH-222ENST00000641587 SRP19P09132 144 aaKnown RBP7.24□□□□□ -1.25
PHGDH-222ENST00000641587 MED14OSP0DP75 135 aa7.24□□□□□ -1.25
PHGDH-222ENST00000641587 DEFB131AP59861 70 aa7.24□□□□□ -1.25
PHGDH-222ENST00000641587 UBE2G1P62253 170 aa7.24□□□□□ -1.25
PHGDH-222ENST00000641587 CCDC28AQ8IWP9 274 aa7.24□□□□□ -1.25
PHGDH-222ENST00000641587 CYB561D1Q8N8Q1 229 aa7.24□□□□□ -1.25
PHGDH-222ENST00000641587 OR10J6PQ8NGY7 276 aa7.24□□□□□ -1.25
PHGDH-222ENST00000641587 HIST1H2BAQ96A08 127 aa7.24□□□□□ -1.25
PHGDH-222ENST00000641587 SLC35B3Q9H1N7 401 aa7.24□□□□□ -1.25
PHGDH-222ENST00000641587 SMDT1Q9H4I9 107 aa7.24□□□□□ -1.25
PHGDH-222ENST00000641587 TRAV34A0A0B4J273 112 aa7.23□□□□□ -1.25
PHGDH-222ENST00000641587 IGHV4-28A0A0C4DH34 117 aa7.23□□□□□ -1.25
PHGDH-222ENST00000641587 SERTM2A0A1B0GWG4 89 aa7.23□□□□□ -1.25
PHGDH-222ENST00000641587 DIRC3C9JPN6 131 aa7.23□□□□□ -1.25
PHGDH-222ENST00000641587 C9JQL5 133 aa7.23□□□□□ -1.25
PHGDH-222ENST00000641587 PRAC2D3DTV9 90 aa7.23□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 39.3 ms