RNA–Protein interactions for RNA: ENST00000640652.1

SCN3A-210, Transcript of sodium voltage-gated channel alpha subunit 3, humanhuman

TSL 5

Gene SCN3A, Length 8,825 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN3A-210ENST00000640652 KIR3DS1Q14943 382 aa4.42□□□□□ -1.7
SCN3A-210ENST00000640652 LGALS9BQ3B8N2 356 aa4.42□□□□□ -1.7
SCN3A-210ENST00000640652 SAMD5Q5TGI4 173 aa4.42□□□□□ -1.7
SCN3A-210ENST00000640652 AMMECR1LQ6DCA0 310 aa4.42□□□□□ -1.7
SCN3A-210ENST00000640652 LGALS9CQ6DKI2 356 aa4.42□□□□□ -1.7
SCN3A-210ENST00000640652 ZNF493Q6ZR52 646 aa4.42□□□□□ -1.7
SCN3A-210ENST00000640652 OR11H6Q8NGC7 330 aa4.42□□□□□ -1.7
SCN3A-210ENST00000640652 RAB37Q96AX2 223 aa4.42□□□□□ -1.7
SCN3A-210ENST00000640652 SMAD7O15105 426 aaKnown RBP4.42□□□□□ -1.7
SCN3A-210ENST00000640652 SNRPD3P62318 126 aaKnown RBP4.42□□□□□ -1.7
SCN3A-210ENST00000640652 KLF17Q5JT82 389 aaPredicted RBP4.42□□□□□ -1.7
SCN3A-210ENST00000640652 MGPP08493 103 aa4.41□□□□□ -1.7
SCN3A-210ENST00000640652 PRTN3P24158 256 aa4.41□□□□□ -1.7
SCN3A-210ENST00000640652 ZNF138P52744 262 aa4.41□□□□□ -1.7
SCN3A-210ENST00000640652 KLRB1Q12918 225 aa4.41□□□□□ -1.7
SCN3A-210ENST00000640652 SPATA12Q7Z6I5 190 aa4.41□□□□□ -1.7
SCN3A-210ENST00000640652 TTC9CQ8N5M4 171 aa4.41□□□□□ -1.7
SCN3A-210ENST00000640652 COPS9Q8WXC6 57 aa4.41□□□□□ -1.7
SCN3A-210ENST00000640652 SIGLEC8Q9NYZ4 499 aa4.41□□□□□ -1.7
SCN3A-210ENST00000640652 TEX15Q9BXT5 2789 aa4.41□□□□□ -1.7
SCN3A-210ENST00000640652 IGKV1D-37A0A075B6S9 117 aa4.41□□□□□ -1.7
SCN3A-210ENST00000640652 CRYGCP07315 174 aa4.41□□□□□ -1.7
SCN3A-210ENST00000640652 AMN1Q8IY45 258 aa4.41□□□□□ -1.7
SCN3A-210ENST00000640652 PRR25Q96S07 402 aa4.41□□□□□ -1.7
SCN3A-210ENST00000640652 H3BUT2 72 aa4.41□□□□□ -1.7
SCN3A-210ENST00000640652 CDKN1BP46527 198 aa4.41□□□□□ -1.7
SCN3A-210ENST00000640652 BOD1L2Q8IYS8 172 aa4.41□□□□□ -1.7
SCN3A-210ENST00000640652 TP53TG3Q9ULZ0 132 aa4.41□□□□□ -1.7
SCN3A-210ENST00000640652 MAJINQ3KP22 176 aa4.41□□□□□ -1.7
SCN3A-210ENST00000640652 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa4.41□□□□□ -1.7
SCN3A-210ENST00000640652 MBD6Q96DN6 1003 aa4.41□□□□□ -1.7
SCN3A-210ENST00000640652 ZFHX4Q86UP3 3567 aa4.41□□□□□ -1.7
SCN3A-210ENST00000640652 TCTAP57738 103 aa4.41□□□□□ -1.7
SCN3A-210ENST00000640652 OR2K2Q8NGT1 345 aa4.41□□□□□ -1.7
SCN3A-210ENST00000640652 C8orf49Q96NF6 230 aa4.41□□□□□ -1.7
SCN3A-210ENST00000640652 RAXQ9Y2V3 346 aa4.41□□□□□ -1.7
SCN3A-210ENST00000640652 C9orf118A6NHY6 69 aa4.41□□□□□ -1.7
SCN3A-210ENST00000640652 H3BRM9 83 aa4.41□□□□□ -1.7
SCN3A-210ENST00000640652 I3L2K1 104 aa4.41□□□□□ -1.7
SCN3A-210ENST00000640652 IGKV1-17P01599 117 aa4.41□□□□□ -1.7
SCN3A-210ENST00000640652 CNTFRP26992 372 aa4.41□□□□□ -1.7
SCN3A-210ENST00000640652 MRAP2Q96G30 205 aa4.41□□□□□ -1.7
SCN3A-210ENST00000640652 S4R3C0 116 aa4.41□□□□□ -1.7
SCN3A-210ENST00000640652 SPENQ96T58 3664 aaKnown RBP4.41□□□□□ -1.7
SCN3A-210ENST00000640652 MORN5Q5VZ52 161 aa4.41□□□□□ -1.7
SCN3A-210ENST00000640652 LHFPL4Q7Z7J7 247 aa4.41□□□□□ -1.7
SCN3A-210ENST00000640652 DEFB125Q8N687 156 aa4.41□□□□□ -1.7
SCN3A-210ENST00000640652 C2orf70A6NJV1 201 aa4.4□□□□□ -1.7
SCN3A-210ENST00000640652 CGB1A6NKQ9 187 aa4.4□□□□□ -1.7
SCN3A-210ENST00000640652 SNAI2O43623 268 aa4.4□□□□□ -1.7
SCN3A-210ENST00000640652 MYCNOSP40205 109 aa4.4□□□□□ -1.7
SCN3A-210ENST00000640652 BCL6BQ8N143 479 aaPredicted RBP4.4□□□□□ -1.7
SCN3A-210ENST00000640652 SCGB3A1Q96QR1 104 aa4.4□□□□□ -1.7
SCN3A-210ENST00000640652 CST9LQ9H4G1 147 aa4.4□□□□□ -1.7
SCN3A-210ENST00000640652 CCL25O15444 150 aa4.4□□□□□ -1.7
SCN3A-210ENST00000640652 DIAPH2-AS1Q14236 149 aa4.4□□□□□ -1.7
SCN3A-210ENST00000640652 MSMPQ1L6U9 139 aa4.4□□□□□ -1.7
SCN3A-210ENST00000640652 PATE2Q6UY27 113 aa4.4□□□□□ -1.7
SCN3A-210ENST00000640652 MLST8Q9BVC4 326 aa4.4□□□□□ -1.7
SCN3A-210ENST00000640652 HRNRQ86YZ3 2850 aaPredicted RBP4.4□□□□□ -1.7
SCN3A-210ENST00000640652 CR1P17927 2039 aa4.4□□□□□ -1.7
SCN3A-210ENST00000640652 K7EIM0 57 aa4.4□□□□□ -1.7
SCN3A-210ENST00000640652 MRPL51Q4U2R6 128 aaKnown RBP4.4□□□□□ -1.7
SCN3A-210ENST00000640652 E7EUB6 86 aa4.4□□□□□ -1.71
SCN3A-210ENST00000640652 C9orf139Q6ZV77 190 aa4.4□□□□□ -1.71
SCN3A-210ENST00000640652 CTSZQ9UBR2 303 aa4.4□□□□□ -1.71
SCN3A-210ENST00000640652 TRAV8-6A0A0B4J262 113 aa4.4□□□□□ -1.71
SCN3A-210ENST00000640652 TRAV21A0A0B4J279 112 aa4.4□□□□□ -1.71
SCN3A-210ENST00000640652 TRGV3P03979 118 aa4.4□□□□□ -1.71
SCN3A-210ENST00000640652 Q1RN00 199 aa4.4□□□□□ -1.71
SCN3A-210ENST00000640652 Q8TAT8 98 aa4.4□□□□□ -1.71
SCN3A-210ENST00000640652 WISP2O76076 250 aa4.4□□□□□ -1.71
SCN3A-210ENST00000640652 FAM106AQ4KMX7 169 aa4.4□□□□□ -1.71
SCN3A-210ENST00000640652 CLEC2AQ6UVW9 174 aa4.4□□□□□ -1.71
SCN3A-210ENST00000640652 ZNF502Q8TBZ5 544 aa4.4□□□□□ -1.71
SCN3A-210ENST00000640652 C1orf159Q96HA4 380 aa4.4□□□□□ -1.71
SCN3A-210ENST00000640652 ZNF747Q9BV97 191 aa4.4□□□□□ -1.71
SCN3A-210ENST00000640652 MOB4Q9Y3A3 225 aa4.4□□□□□ -1.71
SCN3A-210ENST00000640652 ZNF462Q96JM2 2506 aa4.4□□□□□ -1.71
SCN3A-210ENST00000640652 TEX22C9J3V5 150 aa4.39□□□□□ -1.71
SCN3A-210ENST00000640652 H7C1H1 209 aa4.39□□□□□ -1.71
SCN3A-210ENST00000640652 M0R381 172 aa4.39□□□□□ -1.71
SCN3A-210ENST00000640652 PAX8Q06710 450 aa4.39□□□□□ -1.71
SCN3A-210ENST00000640652 FAM159AQ6UWV7 190 aa4.39□□□□□ -1.71
SCN3A-210ENST00000640652 CLEC19AQ6UXS0 136 aa4.39□□□□□ -1.71
SCN3A-210ENST00000640652 ZNF491Q8N8L2 437 aa4.39□□□□□ -1.71
SCN3A-210ENST00000640652 USMG5Q96IX5 58 aa4.39□□□□□ -1.71
SCN3A-210ENST00000640652 OVOL1O14753 267 aa4.39□□□□□ -1.71
SCN3A-210ENST00000640652 TNFRSF6BO95407 300 aa4.39□□□□□ -1.71
SCN3A-210ENST00000640652 SLC25A16P16260 332 aa4.39□□□□□ -1.71
SCN3A-210ENST00000640652 CYSLTR1Q9Y271 337 aa4.39□□□□□ -1.71
SCN3A-210ENST00000640652 LAMA5O15230 3695 aa4.39□□□□□ -1.71
SCN3A-210ENST00000640652 IGLV1-47P01700 117 aa4.39□□□□□ -1.71
SCN3A-210ENST00000640652 IGHV3-23P01764 117 aa4.39□□□□□ -1.71
SCN3A-210ENST00000640652 EBLN2Q6P2I7 272 aa4.39□□□□□ -1.71
SCN3A-210ENST00000640652 IL17RELQ6ZVW7 336 aa4.39□□□□□ -1.71
SCN3A-210ENST00000640652 LINC00477Q96M19 166 aa4.39□□□□□ -1.71
SCN3A-210ENST00000640652 CCL19Q99731 98 aa4.39□□□□□ -1.71
SCN3A-210ENST00000640652 DMXL2Q8TDJ6 3036 aa4.39□□□□□ -1.71
SCN3A-210ENST00000640652 K7EP13 123 aa4.39□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms