RNA–Protein interactions for RNA: ENST00000638083.1

CACNB4-272, Transcript of calcium voltage-gated channel auxiliary subunit beta 4, humanhuman

Gene CACNB4, Length 6,849 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNB4-272ENST00000638083 USF3Q68DE3 2245 aa6.33□□□□□ -1.4
CACNB4-272ENST00000638083 OVOL3O00110 214 aa6.33□□□□□ -1.4
CACNB4-272ENST00000638083 Q6P435 159 aa6.33□□□□□ -1.4
CACNB4-272ENST00000638083 HS3ST6Q96QI5 342 aa6.33□□□□□ -1.4
CACNB4-272ENST00000638083 PLXNA2O75051 1894 aa6.32□□□□□ -1.4
CACNB4-272ENST00000638083 FAM223BA6NKX1 122 aa6.32□□□□□ -1.4
CACNB4-272ENST00000638083 SS18Q15532 418 aa6.32□□□□□ -1.4
CACNB4-272ENST00000638083 C10orf91Q5T1B1 145 aa6.32□□□□□ -1.4
CACNB4-272ENST00000638083 FAM223AQ8IWN6 122 aa6.32□□□□□ -1.4
CACNB4-272ENST00000638083 TP53TG1Q9Y2A0 90 aa6.32□□□□□ -1.4
CACNB4-272ENST00000638083 KLF12Q9Y4X4 402 aa6.32□□□□□ -1.4
CACNB4-272ENST00000638083 TRAV12-2A0A075B6T6 113 aa6.32□□□□□ -1.4
CACNB4-272ENST00000638083 RASL11AQ6T310 242 aa6.32□□□□□ -1.4
CACNB4-272ENST00000638083 IGKV1D-17A0A075B6S4 117 aa6.32□□□□□ -1.4
CACNB4-272ENST00000638083 IGHV2-70DA0A0C4DH43 119 aa6.32□□□□□ -1.4
CACNB4-272ENST00000638083 PMVKQ15126 192 aa6.32□□□□□ -1.4
CACNB4-272ENST00000638083 RNASE13Q5GAN3 156 aaKnown RBP6.32□□□□□ -1.4
CACNB4-272ENST00000638083 SNHG12Q9BXW3 62 aa6.32□□□□□ -1.4
CACNB4-272ENST00000638083 PLCE1Q9P212 2302 aa6.32□□□□□ -1.4
CACNB4-272ENST00000638083 SHANK1Q9Y566 2161 aa6.32□□□□□ -1.4
CACNB4-272ENST00000638083 WIPF3A6NGB9 483 aa6.32□□□□□ -1.4
CACNB4-272ENST00000638083 CLPSL2Q6UWE3 100 aa6.32□□□□□ -1.4
CACNB4-272ENST00000638083 IGKV1-6A0A0C4DH72 117 aa6.32□□□□□ -1.4
CACNB4-272ENST00000638083 SRSF8Q9BRL6 282 aaKnown RBP6.32□□□□□ -1.4
CACNB4-272ENST00000638083 LY96Q9Y6Y9 160 aa6.31□□□□□ -1.4
CACNB4-272ENST00000638083 IGHV1-69DA0A0B4J2H0 117 aa6.31□□□□□ -1.4
CACNB4-272ENST00000638083 IGHV1-69P01742 117 aa6.31□□□□□ -1.4
CACNB4-272ENST00000638083 SAA4P35542 130 aa6.31□□□□□ -1.4
CACNB4-272ENST00000638083 HAMPP81172 84 aa6.31□□□□□ -1.4
CACNB4-272ENST00000638083 RNASE2P10153 161 aaKnown RBP6.31□□□□□ -1.4
CACNB4-272ENST00000638083 LY6G5BQ8NDX9 201 aa6.31□□□□□ -1.4
CACNB4-272ENST00000638083 TSSC4Q9Y5U2 329 aaPredicted RBP6.31□□□□□ -1.4
CACNB4-272ENST00000638083 H3BMM0 161 aa6.31□□□□□ -1.4
CACNB4-272ENST00000638083 PRB2P02812 416 aaPredicted RBP6.31□□□□□ -1.4
CACNB4-272ENST00000638083 IL15RAQ13261 267 aa6.31□□□□□ -1.4
CACNB4-272ENST00000638083 UBE2WQ96B02 151 aa6.31□□□□□ -1.4
CACNB4-272ENST00000638083 DNAJC30Q96LL9 226 aa6.31□□□□□ -1.4
CACNB4-272ENST00000638083 Q86TA4 180 aa6.3□□□□□ -1.4
CACNB4-272ENST00000638083 SPTAN1Q13813 2472 aaKnown RBP6.3□□□□□ -1.4
CACNB4-272ENST00000638083 OOSP1A8MZH6 123 aa6.3□□□□□ -1.4
CACNB4-272ENST00000638083 F5H768 121 aa6.3□□□□□ -1.4
CACNB4-272ENST00000638083 C9orf139Q6ZV77 190 aa6.3□□□□□ -1.4
CACNB4-272ENST00000638083 K7EM74 188 aa6.3□□□□□ -1.4
CACNB4-272ENST00000638083 CD5LO43866 347 aa6.3□□□□□ -1.4
CACNB4-272ENST00000638083 TMEM126AQ9H061 195 aa6.3□□□□□ -1.4
CACNB4-272ENST00000638083 TINCRA0A1B0GVN0 87 aa6.3□□□□□ -1.4
CACNB4-272ENST00000638083 K7ERJ3 54 aa6.3□□□□□ -1.4
CACNB4-272ENST00000638083 NPSP0C0P6 89 aa6.3□□□□□ -1.4
CACNB4-272ENST00000638083 LINC01549A6NIU2 74 aa6.3□□□□□ -1.4
CACNB4-272ENST00000638083 A0A1W2PPI3 338 aa6.29□□□□□ -1.4
CACNB4-272ENST00000638083 GAGE6Q13070 117 aa6.29□□□□□ -1.4
CACNB4-272ENST00000638083 RBMY1FQ15415 496 aaKnown RBP6.29□□□□□ -1.4
CACNB4-272ENST00000638083 MRPL27Q9P0M9 148 aaKnown RBP6.29□□□□□ -1.4
CACNB4-272ENST00000638083 ACACAQ13085 2346 aa6.29□□□□□ -1.4
CACNB4-272ENST00000638083 CEACAM8P31997 349 aaPredicted RBP6.29□□□□□ -1.4
CACNB4-272ENST00000638083 C2orf16Q68DN1 1984 aa6.29□□□□□ -1.4
CACNB4-272ENST00000638083 PCNX1Q96RV3 2341 aa6.29□□□□□ -1.4
CACNB4-272ENST00000638083 G3V318 75 aa6.29□□□□□ -1.4
CACNB4-272ENST00000638083 ZNF561-AS1K7EIQ3 104 aa6.29□□□□□ -1.4
CACNB4-272ENST00000638083 ANXA2RQ3ZCQ2 193 aa6.29□□□□□ -1.4
CACNB4-272ENST00000638083 ATP6V0BQ99437 205 aa6.29□□□□□ -1.4
CACNB4-272ENST00000638083 A8MWP6 167 aa6.29□□□□□ -1.4
CACNB4-272ENST00000638083 SOCS3O14543 225 aa6.29□□□□□ -1.4
CACNB4-272ENST00000638083 GAGE7O76087 117 aa6.29□□□□□ -1.4
CACNB4-272ENST00000638083 GAGE12FP0CL80 117 aa6.29□□□□□ -1.4
CACNB4-272ENST00000638083 GAGE12GP0CL81 117 aa6.29□□□□□ -1.4
CACNB4-272ENST00000638083 GAGE12IP0CL82 117 aa6.29□□□□□ -1.4
CACNB4-272ENST00000638083 FGF6P10767 208 aa6.29□□□□□ -1.4
CACNB4-272ENST00000638083 USMG5Q96IX5 58 aa6.29□□□□□ -1.4
CACNB4-272ENST00000638083 ADAMTS9Q9P2N4 1935 aa6.28□□□□□ -1.4
CACNB4-272ENST00000638083 APOC4P55056 127 aa6.28□□□□□ -1.4
CACNB4-272ENST00000638083 RSPO1Q2MKA7 263 aaPredicted RBP6.28□□□□□ -1.4
CACNB4-272ENST00000638083 ETDBQ3ZM63 59 aa6.28□□□□□ -1.4
CACNB4-272ENST00000638083 ATP6V0E1O15342 81 aa6.28□□□□□ -1.4
CACNB4-272ENST00000638083 PFN1P07737 140 aaKnown RBP6.28□□□□□ -1.4
CACNB4-272ENST00000638083 PAX9P55771 341 aa6.28□□□□□ -1.4
CACNB4-272ENST00000638083 DUX4L9Q6RFH8 374 aaPredicted RBP6.28□□□□□ -1.4
CACNB4-272ENST00000638083 C18orf32Q8TCD1 76 aa6.28□□□□□ -1.4
CACNB4-272ENST00000638083 UBE2E1P51965 193 aa6.28□□□□□ -1.4
CACNB4-272ENST00000638083 CGB3P0DN86 165 aa6.28□□□□□ -1.4
CACNB4-272ENST00000638083 TRPT1Q86TN4 253 aaKnown RBP6.28□□□□□ -1.4
CACNB4-272ENST00000638083 HOXD3P31249 432 aaPredicted RBP6.28□□□□□ -1.4
CACNB4-272ENST00000638083 SLAQ13239 276 aa6.28□□□□□ -1.4
CACNB4-272ENST00000638083 ZNRF2Q8NHG8 242 aa6.28□□□□□ -1.4
CACNB4-272ENST00000638083 IGLV3-1P01715 115 aa6.28□□□□□ -1.4
CACNB4-272ENST00000638083 AZU1P20160 251 aa6.28□□□□□ -1.4
CACNB4-272ENST00000638083 LINC01559Q495D7 138 aa6.28□□□□□ -1.4
CACNB4-272ENST00000638083 TEX36Q5VZQ5 186 aa6.28□□□□□ -1.4
CACNB4-272ENST00000638083 C2orf66Q6UXQ4 117 aa6.28□□□□□ -1.4
CACNB4-272ENST00000638083 DEFB105AQ8NG35 78 aa6.28□□□□□ -1.4
CACNB4-272ENST00000638083 TMEM190Q8WZ59 177 aa6.28□□□□□ -1.4
CACNB4-272ENST00000638083 NDUFB8O95169 186 aa6.27□□□□□ -1.41
CACNB4-272ENST00000638083 MRPL51Q4U2R6 128 aaKnown RBP6.27□□□□□ -1.41
CACNB4-272ENST00000638083 SCRT2Q9NQ03 307 aa6.27□□□□□ -1.41
CACNB4-272ENST00000638083 DAZ1Q9NQZ3 744 aaKnown RBP6.27□□□□□ -1.41
CACNB4-272ENST00000638083 SPRY2O43597 315 aa6.27□□□□□ -1.41
CACNB4-272ENST00000638083 ZNF843Q8N446 348 aa6.27□□□□□ -1.41
CACNB4-272ENST00000638083 SHANK2-AS3Q9BTD1 123 aa6.27□□□□□ -1.41
CACNB4-272ENST00000638083 PROK2Q9HC23 129 aa6.27□□□□□ -1.41
CACNB4-272ENST00000638083 ANAPC1Q9H1A4 1944 aa6.27□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 68.8 ms