RNA–Protein interactions for RNA: ENST00000634934.2

LINC00339-208, long intergenic non-protein coding RNA 339, humanhuman

TSL 5 BASIC

Gene LINC00339, Length 1,518 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00339-208ENST00000634934 BMI1P35226 326 aa10.94□□□□□ -0.66
LINC00339-208ENST00000634934 LEMD1Q68G75 181 aa10.94□□□□□ -0.66
LINC00339-208ENST00000634934 ADAMTSL5Q6ZMM2 481 aa10.94□□□□□ -0.66
LINC00339-208ENST00000634934 KIR2DL5AQ8N109 375 aa10.94□□□□□ -0.66
LINC00339-208ENST00000634934 ZNF664Q8N3J9 261 aa10.94□□□□□ -0.66
LINC00339-208ENST00000634934 DYNLRB2Q8TF09 96 aa10.94□□□□□ -0.66
LINC00339-208ENST00000634934 GRAMD2BQ96HH9 432 aa10.94□□□□□ -0.66
LINC00339-208ENST00000634934 SHANK2-AS3Q9BTD1 123 aa10.94□□□□□ -0.66
LINC00339-208ENST00000634934 V9GYV3 84 aa10.94□□□□□ -0.66
LINC00339-208ENST00000634934 HELTA6NFD8 242 aa10.94□□□□□ -0.66
LINC00339-208ENST00000634934 CHEK1O14757 476 aa10.94□□□□□ -0.66
LINC00339-208ENST00000634934 GNG4P50150 75 aa10.94□□□□□ -0.66
LINC00339-208ENST00000634934 C1orf194Q5T5A4 169 aa10.94□□□□□ -0.66
LINC00339-208ENST00000634934 SPATA31B1PQ5VZV4 182 aa10.94□□□□□ -0.66
LINC00339-208ENST00000634934 FAM231DQ6ZW35 169 aa10.94□□□□□ -0.66
LINC00339-208ENST00000634934 WFDC9Q8NEX5 89 aa10.94□□□□□ -0.66
LINC00339-208ENST00000634934 U3KQE9 123 aa10.94□□□□□ -0.66
LINC00339-208ENST00000634934 H3BRN7 92 aa10.93□□□□□ -0.66
LINC00339-208ENST00000634934 BUB3O43684 328 aa10.93□□□□□ -0.66
LINC00339-208ENST00000634934 OR10J3Q5JRS4 329 aa10.93□□□□□ -0.66
LINC00339-208ENST00000634934 MORN5Q5VZ52 161 aa10.93□□□□□ -0.66
LINC00339-208ENST00000634934 MIR17HGQ75NE6 70 aa10.93□□□□□ -0.66
LINC00339-208ENST00000634934 OR8I2Q8N0Y5 310 aa10.93□□□□□ -0.66
LINC00339-208ENST00000634934 STXBP6Q8NFX7 210 aa10.93□□□□□ -0.66
LINC00339-208ENST00000634934 ZNF503Q96F45 646 aa10.93□□□□□ -0.66
LINC00339-208ENST00000634934 TRAV5A0A0B4J249 113 aa10.92□□□□□ -0.66
LINC00339-208ENST00000634934 IGLL1P15814 213 aa10.92□□□□□ -0.66
LINC00339-208ENST00000634934 IGF2BP2-AS1Q96M15 143 aa10.92□□□□□ -0.66
LINC00339-208ENST00000634934 MCRIP2Q9BUT9 160 aaKnown RBP10.92□□□□□ -0.66
LINC00339-208ENST00000634934 SIGLEC8Q9NYZ4 499 aa10.92□□□□□ -0.66
LINC00339-208ENST00000634934 SMIM27A0A1W2PRY6 76 aa10.91□□□□□ -0.66
LINC00339-208ENST00000634934 RPL11P62913 178 aaKnown RBP10.91□□□□□ -0.66
LINC00339-208ENST00000634934 CENPWQ5EE01 88 aa10.91□□□□□ -0.66
LINC00339-208ENST00000634934 C9orf66Q5T8R8 295 aa10.91□□□□□ -0.66
LINC00339-208ENST00000634934 C16orf54Q6UWD8 224 aa10.91□□□□□ -0.66
LINC00339-208ENST00000634934 CMTM2Q8TAZ6 248 aa10.91□□□□□ -0.66
LINC00339-208ENST00000634934 FAM167A-AS1Q96KT0 104 aa10.91□□□□□ -0.66
LINC00339-208ENST00000634934 IGLV2-8P01709 118 aa10.9□□□□□ -0.66
LINC00339-208ENST00000634934 HLA-DQA1P01909 254 aa10.9□□□□□ -0.66
LINC00339-208ENST00000634934 CRISP2P16562 243 aa10.9□□□□□ -0.66
LINC00339-208ENST00000634934 ERVFC1-1P60608 527 aa10.9□□□□□ -0.66
LINC00339-208ENST00000634934 DEFB114Q30KQ6 69 aa10.9□□□□□ -0.66
LINC00339-208ENST00000634934 TCF24Q7RTU0 167 aa10.9□□□□□ -0.66
LINC00339-208ENST00000634934 GLMPQ8WWB7 406 aa10.9□□□□□ -0.66
LINC00339-208ENST00000634934 C20orf144Q9BQM9 153 aa10.9□□□□□ -0.66
LINC00339-208ENST00000634934 MRPL18Q9H0U6 180 aaKnown RBP10.9□□□□□ -0.66
LINC00339-208ENST00000634934 NAGKQ9UJ70 344 aa10.9□□□□□ -0.66
LINC00339-208ENST00000634934 RNF24Q9Y225 148 aa10.9□□□□□ -0.66
LINC00339-208ENST00000634934 NOTCH3Q9UM47 2321 aa10.9□□□□□ -0.66
LINC00339-208ENST00000634934 IGKV3-7A0A075B6H7 116 aa10.89□□□□□ -0.67
LINC00339-208ENST00000634934 PGPEP1LA6NFU8 196 aa10.89□□□□□ -0.67
LINC00339-208ENST00000634934 GGTLC3B5MD39 225 aa10.89□□□□□ -0.67
LINC00339-208ENST00000634934 CD300EQ496F6 205 aaPredicted RBP10.89□□□□□ -0.67
LINC00339-208ENST00000634934 SIGLEC15Q6ZMC9 328 aa10.89□□□□□ -0.67
LINC00339-208ENST00000634934 TEX43Q6ZNM6 134 aa10.89□□□□□ -0.67
LINC00339-208ENST00000634934 RBPMS2Q6ZRY4 209 aaKnown RBP10.89□□□□□ -0.67
LINC00339-208ENST00000634934 SLC25A2Q9BXI2 301 aa10.89□□□□□ -0.67
LINC00339-208ENST00000634934 TP53TG3Q9ULZ0 132 aa10.89□□□□□ -0.67
LINC00339-208ENST00000634934 RPL7P18124 248 aaKnown RBP10.89□□□□□ -0.67
LINC00339-208ENST00000634934 INSL3P51460 131 aa10.89□□□□□ -0.67
LINC00339-208ENST00000634934 BPIFA4PQ86YQ2 179 aa10.89□□□□□ -0.67
LINC00339-208ENST00000634934 ZNF785A8K8V0 405 aa10.88□□□□□ -0.67
LINC00339-208ENST00000634934 OR7C2O60412 319 aa10.88□□□□□ -0.67
LINC00339-208ENST00000634934 IGLV1-51P01701 117 aa10.88□□□□□ -0.67
LINC00339-208ENST00000634934 SNRPCP09234 159 aaKnown RBP10.88□□□□□ -0.67
LINC00339-208ENST00000634934 LINC00310P59036 64 aa10.88□□□□□ -0.67
LINC00339-208ENST00000634934 DMRTA1Q5VZB9 504 aa10.88□□□□□ -0.67
LINC00339-208ENST00000634934 TMEM61Q8N0U2 210 aa10.88□□□□□ -0.67
LINC00339-208ENST00000634934 GPR82Q96P67 336 aa10.88□□□□□ -0.67
LINC00339-208ENST00000634934 PYYP10082 97 aa10.87□□□□□ -0.67
LINC00339-208ENST00000634934 TMEM136Q6ZRR5 245 aa10.87□□□□□ -0.67
LINC00339-208ENST00000634934 TMEM256Q8N2U0 113 aa10.87□□□□□ -0.67
LINC00339-208ENST00000634934 PAXXQ9BUH6 204 aa10.87□□□□□ -0.67
LINC00339-208ENST00000634934 PRO1933Q9H354 126 aa10.87□□□□□ -0.67
LINC00339-208ENST00000634934 KLF12Q9Y4X4 402 aa10.87□□□□□ -0.67
LINC00339-208ENST00000634934 MEGF8Q7Z7M0 2845 aa10.86□□□□□ -0.67
LINC00339-208ENST00000634934 IZUMO1RA6ND01 250 aa10.86□□□□□ -0.67
LINC00339-208ENST00000634934 TFPI2P48307 235 aa10.86□□□□□ -0.67
LINC00339-208ENST00000634934 OXLD1Q5BKU9 147 aa10.86□□□□□ -0.67
LINC00339-208ENST00000634934 CT83Q5H943 113 aa10.86□□□□□ -0.67
LINC00339-208ENST00000634934 ATP5L2Q7Z4Y8 100 aa10.86□□□□□ -0.67
LINC00339-208ENST00000634934 WFDC3Q8IUB2 231 aa10.86□□□□□ -0.67
LINC00339-208ENST00000634934 AURKAIP1Q9NWT8 199 aaPredicted RBP10.86□□□□□ -0.67
LINC00339-208ENST00000634934 SMAD5-AS1Q9Y6J3 95 aa10.86□□□□□ -0.67
LINC00339-208ENST00000634934 NOTCH1P46531 2555 aa10.86□□□□□ -0.67
LINC00339-208ENST00000634934 ZNF705GA8MUZ8 300 aaPredicted RBP10.85□□□□□ -0.67
LINC00339-208ENST00000634934 SNURFLB1AK76 121 aa10.85□□□□□ -0.67
LINC00339-208ENST00000634934 H3BTX0 84 aa10.85□□□□□ -0.67
LINC00339-208ENST00000634934 MRPS12O15235 138 aaKnown RBP10.85□□□□□ -0.67
LINC00339-208ENST00000634934 GP9P14770 177 aa10.85□□□□□ -0.67
LINC00339-208ENST00000634934 UBE2L3P68036 154 aaKnown RBP10.85□□□□□ -0.67
LINC00339-208ENST00000634934 IBA57Q5T440 356 aaKnown RBP10.85□□□□□ -0.67
LINC00339-208ENST00000634934 LCN12Q6JVE5 192 aa10.85□□□□□ -0.67
LINC00339-208ENST00000634934 OR2K2Q8NGT1 345 aa10.85□□□□□ -0.67
LINC00339-208ENST00000634934 MS4A6AQ9H2W1 248 aa10.85□□□□□ -0.67
LINC00339-208ENST00000634934 TMEM14CQ9P0S9 112 aa10.85□□□□□ -0.67
LINC00339-208ENST00000634934 TRAV25A0A0B4J276 109 aa10.84□□□□□ -0.67
LINC00339-208ENST00000634934 SLC17A3O00476 420 aa10.84□□□□□ -0.67
LINC00339-208ENST00000634934 SUMO1P63165 101 aaKnown RBP10.84□□□□□ -0.67
LINC00339-208ENST00000634934 BLNKQ8WV28 456 aa10.84□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms