RNA–Protein interactions for RNA: ENST00000627620.2

SCN8A-209, Transcript of sodium voltage-gated channel alpha subunit 8, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene SCN8A, Length 5,943 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN8A-209ENST00000627620 SPTAN1Q13813 2472 aaKnown RBP10.22□□□□□ -0.77
SCN8A-209ENST00000627620 TRAV12-2A0A075B6T6 113 aa10.22□□□□□ -0.77
SCN8A-209ENST00000627620 H3BRN7 92 aa10.22□□□□□ -0.77
SCN8A-209ENST00000627620 J3QLI3 93 aa10.22□□□□□ -0.77
SCN8A-209ENST00000627620 RSPO1Q2MKA7 263 aaPredicted RBP10.22□□□□□ -0.77
SCN8A-209ENST00000627620 C18orf32Q8TCD1 76 aa10.22□□□□□ -0.77
SCN8A-209ENST00000627620 YLPM1P49750 1951 aaKnown RBP10.22□□□□□ -0.77
SCN8A-209ENST00000627620 DIAPH2-AS1Q14236 149 aa10.22□□□□□ -0.77
SCN8A-209ENST00000627620 Q8N8P6 123 aa10.22□□□□□ -0.77
SCN8A-209ENST00000627620 ANXA2RQ3ZCQ2 193 aa10.21□□□□□ -0.77
SCN8A-209ENST00000627620 ZNF664Q8N3J9 261 aa10.21□□□□□ -0.77
SCN8A-209ENST00000627620 PRR25Q96S07 402 aa10.21□□□□□ -0.77
SCN8A-209ENST00000627620 RSPO3Q9BXY4 272 aaPredicted RBP10.21□□□□□ -0.77
SCN8A-209ENST00000627620 CDKN1BP46527 198 aa10.21□□□□□ -0.77
SCN8A-209ENST00000627620 OCIAD2Q56VL3 154 aa10.21□□□□□ -0.77
SCN8A-209ENST00000627620 Q71RC1 249 aaPredicted RBP10.21□□□□□ -0.77
SCN8A-209ENST00000627620 TMEM141Q96I45 108 aa10.21□□□□□ -0.77
SCN8A-209ENST00000627620 ARFGEF3Q5TH69 2177 aa10.21□□□□□ -0.78
SCN8A-209ENST00000627620 GAGE12BA1L429 117 aa10.21□□□□□ -0.78
SCN8A-209ENST00000627620 GAGE7O76087 117 aa10.21□□□□□ -0.78
SCN8A-209ENST00000627620 GAGE12FP0CL80 117 aa10.21□□□□□ -0.78
SCN8A-209ENST00000627620 GAGE12GP0CL81 117 aa10.21□□□□□ -0.78
SCN8A-209ENST00000627620 GAGE12IP0CL82 117 aa10.21□□□□□ -0.78
SCN8A-209ENST00000627620 ZNF726P1Q15940 193 aa10.21□□□□□ -0.78
SCN8A-209ENST00000627620 ZNF561-AS1K7EIQ3 104 aa10.21□□□□□ -0.78
SCN8A-209ENST00000627620 PTPRDP23468 1912 aa10.21□□□□□ -0.78
SCN8A-209ENST00000627620 DOCK8Q8NF50 2099 aa10.2□□□□□ -0.78
SCN8A-209ENST00000627620 DOCK10Q96BY6 2186 aa10.2□□□□□ -0.78
SCN8A-209ENST00000627620 J3QKU1 62 aa10.2□□□□□ -0.78
SCN8A-209ENST00000627620 FAM120AOSQ5T036 256 aa10.2□□□□□ -0.78
SCN8A-209ENST00000627620 HAPLN4Q86UW8 402 aa10.2□□□□□ -0.78
SCN8A-209ENST00000627620 TMEM14CQ9P0S9 112 aa10.2□□□□□ -0.78
SCN8A-209ENST00000627620 TRAV26-2A0A0B4J265 109 aa10.2□□□□□ -0.78
SCN8A-209ENST00000627620 A0A1B0GUS0 222 aa10.2□□□□□ -0.78
SCN8A-209ENST00000627620 SDHAF1A6NFY7 115 aa10.2□□□□□ -0.78
SCN8A-209ENST00000627620 DLEU1O43261 78 aa10.2□□□□□ -0.78
SCN8A-209ENST00000627620 ZFAND6Q6FIF0 208 aa10.2□□□□□ -0.78
SCN8A-209ENST00000627620 ZNF114Q8NC26 417 aa10.2□□□□□ -0.78
SCN8A-209ENST00000627620 DNAJC30Q96LL9 226 aa10.2□□□□□ -0.78
SCN8A-209ENST00000627620 KLF12Q9Y4X4 402 aa10.2□□□□□ -0.78
SCN8A-209ENST00000627620 ZNF407Q9C0G0 2248 aa10.2□□□□□ -0.78
SCN8A-209ENST00000627620 RLFQ13129 1914 aa10.2□□□□□ -0.78
SCN8A-209ENST00000627620 TICRRQ7Z2Z1 1910 aa10.2□□□□□ -0.78
SCN8A-209ENST00000627620 E9PQ18 207 aa10.19□□□□□ -0.78
SCN8A-209ENST00000627620 ZNRF2Q8NHG8 242 aa10.19□□□□□ -0.78
SCN8A-209ENST00000627620 MRPL51Q4U2R6 128 aaKnown RBP10.19□□□□□ -0.78
SCN8A-209ENST00000627620 NEGR1Q7Z3B1 354 aa10.19□□□□□ -0.78
SCN8A-209ENST00000627620 VWC2LB2RUY7 222 aa10.19□□□□□ -0.78
SCN8A-209ENST00000627620 PMVKQ15126 192 aa10.19□□□□□ -0.78
SCN8A-209ENST00000627620 ZNF48Q96MX3 618 aaPredicted RBP10.19□□□□□ -0.78
SCN8A-209ENST00000627620 IGHV3-38A0A0C4DH36 116 aa10.18□□□□□ -0.78
SCN8A-209ENST00000627620 CD5LO43866 347 aa10.18□□□□□ -0.78
SCN8A-209ENST00000627620 WNK2Q9Y3S1 2297 aa10.18□□□□□ -0.78
SCN8A-209ENST00000627620 PRSS57Q6UWY2 283 aa10.18□□□□□ -0.78
SCN8A-209ENST00000627620 C9JAW5 83 aa10.18□□□□□ -0.78
SCN8A-209ENST00000627620 CACNA1HO95180 2353 aa10.18□□□□□ -0.78
SCN8A-209ENST00000627620 PFN2P35080 140 aa10.18□□□□□ -0.78
SCN8A-209ENST00000627620 GAGE2AQ6NT46 116 aa10.18□□□□□ -0.78
SCN8A-209ENST00000627620 IGLC1P0CG04 106 aa10.17□□□□□ -0.78
SCN8A-209ENST00000627620 V9GYV3 84 aa10.17□□□□□ -0.78
SCN8A-209ENST00000627620 APOC4P55056 127 aa10.17□□□□□ -0.78
SCN8A-209ENST00000627620 KAAG1Q9UBP8 84 aa10.17□□□□□ -0.78
SCN8A-209ENST00000627620 IGHV7-4-1A0A0J9YVY3 117 aa10.17□□□□□ -0.78
SCN8A-209ENST00000627620 GAGE6Q13070 117 aa10.17□□□□□ -0.78
SCN8A-209ENST00000627620 FAM231DQ6ZW35 169 aa10.17□□□□□ -0.78
SCN8A-209ENST00000627620 PIP4P1Q86T03 277 aa10.17□□□□□ -0.78
SCN8A-209ENST00000627620 TMEM243Q9BU79 118 aa10.17□□□□□ -0.78
SCN8A-209ENST00000627620 THAP8Q8NA92 274 aa10.16□□□□□ -0.78
SCN8A-209ENST00000627620 A8MWP6 167 aa10.16□□□□□ -0.78
SCN8A-209ENST00000627620 UBE2V1Q13404 147 aa10.16□□□□□ -0.78
SCN8A-209ENST00000627620 POLR3KQ9Y2Y1 108 aaPredicted RBP10.16□□□□□ -0.78
SCN8A-209ENST00000627620 ELANEP08246 267 aa10.16□□□□□ -0.78
SCN8A-209ENST00000627620 NBL1P41271 181 aa10.16□□□□□ -0.78
SCN8A-209ENST00000627620 SLAQ13239 276 aa10.16□□□□□ -0.78
SCN8A-209ENST00000627620 SMIM27A0A1W2PRY6 76 aa10.16□□□□□ -0.78
SCN8A-209ENST00000627620 ZNF124Q15973 351 aa10.16□□□□□ -0.78
SCN8A-209ENST00000627620 ZC2HC1AQ96GY0 325 aa10.16□□□□□ -0.78
SCN8A-209ENST00000627620 MRPL52Q86TS9 123 aaKnown RBP10.15□□□□□ -0.78
SCN8A-209ENST00000627620 HLA-DRB4P13762 266 aa10.15□□□□□ -0.78
SCN8A-209ENST00000627620 FXYD5Q96DB9 178 aa10.15□□□□□ -0.78
SCN8A-209ENST00000627620 HLA-DRB4X5D2U9 266 aa10.15□□□□□ -0.78
SCN8A-209ENST00000627620 C22orf46C9J442 243 aa10.15□□□□□ -0.78
SCN8A-209ENST00000627620 IGLV3-1P01715 115 aa10.15□□□□□ -0.78
SCN8A-209ENST00000627620 PRSS33Q8NF86 280 aa10.15□□□□□ -0.78
SCN8A-209ENST00000627620 SHISA9B4DS77 424 aa10.15□□□□□ -0.79
SCN8A-209ENST00000627620 NDUFS7O75251 213 aa10.14□□□□□ -0.79
SCN8A-209ENST00000627620 VOPP1Q96AW1 172 aa10.14□□□□□ -0.79
SCN8A-209ENST00000627620 SNHG12Q9BXW3 62 aa10.14□□□□□ -0.79
SCN8A-209ENST00000627620 HOXB4P17483 251 aaPredicted RBP10.14□□□□□ -0.79
SCN8A-209ENST00000627620 ADAMTSL5Q6ZMM2 481 aa10.14□□□□□ -0.79
SCN8A-209ENST00000627620 K7EM74 188 aa10.14□□□□□ -0.79
SCN8A-209ENST00000627620 IGHV2-5P01817 119 aa10.14□□□□□ -0.79
SCN8A-209ENST00000627620 GRNP28799 593 aaKnown RBP10.14□□□□□ -0.79
SCN8A-209ENST00000627620 NKAPP1Q8N9T2 125 aa10.14□□□□□ -0.79
SCN8A-209ENST00000627620 NOTCH3Q9UM47 2321 aa10.13□□□□□ -0.79
SCN8A-209ENST00000627620 NXPH4O95158 308 aa10.13□□□□□ -0.79
SCN8A-209ENST00000627620 ZNF491Q8N8L2 437 aa10.13□□□□□ -0.79
SCN8A-209ENST00000627620 IGHV1-24A0A0C4DH33 117 aa10.13□□□□□ -0.79
SCN8A-209ENST00000627620 ASPHD1Q5U4P2 390 aa10.13□□□□□ -0.79
SCN8A-209ENST00000627620 CTSZQ9UBR2 303 aa10.13□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 61.3 ms