RNA–Protein interactions for RNA: ENST00000626236.2

SGMS1-211, Transcript of sphingomyelin synthase 1, humanhuman

TSL 1 (best)

Gene SGMS1, Length 1,013 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGMS1-211ENST00000626236 FAM210AQ96ND0 272 aa6.28□□□□□ -1.4
SGMS1-211ENST00000626236 VGLL1Q99990 258 aa6.28□□□□□ -1.4
SGMS1-211ENST00000626236 ATG101Q9BSB4 218 aa6.28□□□□□ -1.4
SGMS1-211ENST00000626236 EIF5A2Q9GZV4 153 aaKnown RBP6.28□□□□□ -1.4
SGMS1-211ENST00000626236 PPP1R14DQ9NXH3 145 aa6.28□□□□□ -1.4
SGMS1-211ENST00000626236 VAX2Q9UIW0 290 aa6.28□□□□□ -1.4
SGMS1-211ENST00000626236 LOC102724200A0A096LPH7 203 aaPredicted RBP6.27□□□□□ -1.41
SGMS1-211ENST00000626236 TRAV8-1A0A0A6YYK1 113 aa6.27□□□□□ -1.41
SGMS1-211ENST00000626236 SERTM2A0A1B0GWG4 89 aa6.27□□□□□ -1.41
SGMS1-211ENST00000626236 SCO2A0A1W2PP80 73 aa6.27□□□□□ -1.41
SGMS1-211ENST00000626236 RBAKDNA6NC62 111 aa6.27□□□□□ -1.41
SGMS1-211ENST00000626236 RBMY1BA6NDE4 496 aaKnown RBP6.27□□□□□ -1.41
SGMS1-211ENST00000626236 RBMY1EA6NEQ0 496 aaKnown RBP6.27□□□□□ -1.41
SGMS1-211ENST00000626236 NPIPB6E9PJ23 425 aa6.27□□□□□ -1.41
SGMS1-211ENST00000626236 F6UZH7 168 aa6.27□□□□□ -1.41
SGMS1-211ENST00000626236 RBMY1DP0C7P1 496 aaKnown RBP6.27□□□□□ -1.41
SGMS1-211ENST00000626236 FRMD6-AS1P0C7T7 363 aa6.27□□□□□ -1.41
SGMS1-211ENST00000626236 DEFA6Q01524 100 aa6.27□□□□□ -1.41
SGMS1-211ENST00000626236 ZNF506Q5JVG8 444 aa6.27□□□□□ -1.41
SGMS1-211ENST00000626236 TMEM78Q5T7P6 136 aa6.27□□□□□ -1.41
SGMS1-211ENST00000626236 ARL6IP6Q8N6S5 226 aa6.27□□□□□ -1.41
SGMS1-211ENST00000626236 CYB561D1Q8N8Q1 229 aa6.27□□□□□ -1.41
SGMS1-211ENST00000626236 MRAPQ8TCY5 172 aa6.27□□□□□ -1.41
SGMS1-211ENST00000626236 HIST1H2BAQ96A08 127 aa6.27□□□□□ -1.41
SGMS1-211ENST00000626236 SGK494Q96LW2 274 aa6.27□□□□□ -1.41
SGMS1-211ENST00000626236 TXNDC17Q9BRA2 123 aa6.27□□□□□ -1.41
SGMS1-211ENST00000626236 TCEAL7Q9BRU2 100 aa6.27□□□□□ -1.41
SGMS1-211ENST00000626236 AGPAT4-IT1Q9H0P7 198 aa6.27□□□□□ -1.41
SGMS1-211ENST00000626236 MEGF8Q7Z7M0 2845 aa6.27□□□□□ -1.41
SGMS1-211ENST00000626236 TRAV34A0A0B4J273 112 aa6.26□□□□□ -1.41
SGMS1-211ENST00000626236 A8MZ25 164 aa6.26□□□□□ -1.41
SGMS1-211ENST00000626236 PDE6DO43924 150 aa6.26□□□□□ -1.41
SGMS1-211ENST00000626236 CT45A10P0DMU9 189 aa6.26□□□□□ -1.41
SGMS1-211ENST00000626236 AKR1C3P42330 323 aa6.26□□□□□ -1.41
SGMS1-211ENST00000626236 FXYD7P58549 80 aa6.26□□□□□ -1.41
SGMS1-211ENST00000626236 C9orf47Q6ZRZ4 202 aa6.26□□□□□ -1.41
SGMS1-211ENST00000626236 TMEM75Q8N9X5 138 aa6.26□□□□□ -1.41
SGMS1-211ENST00000626236 Q8TAT8 98 aa6.26□□□□□ -1.41
SGMS1-211ENST00000626236 LINC00477Q96M19 166 aa6.26□□□□□ -1.41
SGMS1-211ENST00000626236 LINC00479Q96M42 142 aa6.26□□□□□ -1.41
SGMS1-211ENST00000626236 ASCL2Q99929 193 aa6.26□□□□□ -1.41
SGMS1-211ENST00000626236 SLC35B3Q9H1N7 401 aa6.26□□□□□ -1.41
SGMS1-211ENST00000626236 A8MTW9 85 aa6.25□□□□□ -1.41
SGMS1-211ENST00000626236 CA1P00915 261 aaPredicted RBP6.25□□□□□ -1.41
SGMS1-211ENST00000626236 ZNF138P52744 262 aa6.25□□□□□ -1.41
SGMS1-211ENST00000626236 APOC4P55056 127 aa6.25□□□□□ -1.41
SGMS1-211ENST00000626236 NUTF2P61970 127 aaKnown RBP6.25□□□□□ -1.41
SGMS1-211ENST00000626236 UBE2G1P62253 170 aa6.25□□□□□ -1.41
SGMS1-211ENST00000626236 SPINK13Q1W4C9 94 aa6.25□□□□□ -1.41
SGMS1-211ENST00000626236 MORN3Q6PF18 240 aaPredicted RBP6.25□□□□□ -1.41
SGMS1-211ENST00000626236 AMTNQ6UX39 209 aa6.25□□□□□ -1.41
SGMS1-211ENST00000626236 LINC00322Q6ZN03 302 aaPredicted RBP6.25□□□□□ -1.41
SGMS1-211ENST00000626236 PRNTQ86SH4 94 aa6.25□□□□□ -1.41
SGMS1-211ENST00000626236 FMC1Q96HJ9 113 aa6.25□□□□□ -1.41
SGMS1-211ENST00000626236 CLUHP3Q96NS8 147 aa6.25□□□□□ -1.41
SGMS1-211ENST00000626236 MED9Q9NWA0 146 aa6.25□□□□□ -1.41
SGMS1-211ENST00000626236 ZNF492Q9P255 531 aa6.25□□□□□ -1.41
SGMS1-211ENST00000626236 PSG8Q9UQ74 426 aa6.25□□□□□ -1.41
SGMS1-211ENST00000626236 TRAV12-2A0A075B6T6 113 aa6.24□□□□□ -1.41
SGMS1-211ENST00000626236 FBLL1A6NHQ2 334 aaKnown RBP6.24□□□□□ -1.41
SGMS1-211ENST00000626236 J3KRW8 73 aa6.24□□□□□ -1.41
SGMS1-211ENST00000626236 M0R2Z0 102 aa6.24□□□□□ -1.41
SGMS1-211ENST00000626236 IGLV2-11P01706 119 aa6.24□□□□□ -1.41
SGMS1-211ENST00000626236 LEPP41159 167 aa6.24□□□□□ -1.41
SGMS1-211ENST00000626236 RPL35P42766 123 aaKnown RBP6.24□□□□□ -1.41
SGMS1-211ENST00000626236 CDKN1BP46527 198 aa6.24□□□□□ -1.41
SGMS1-211ENST00000626236 CEBPGP53567 150 aa6.24□□□□□ -1.41
SGMS1-211ENST00000626236 SRSF3P84103 164 aaKnown RBP6.24□□□□□ -1.41
SGMS1-211ENST00000626236 FLI1Q01543 452 aaPredicted RBP6.24□□□□□ -1.41
SGMS1-211ENST00000626236 PEA15Q15121 130 aa6.24□□□□□ -1.41
SGMS1-211ENST00000626236 Q86TA4 180 aa6.24□□□□□ -1.41
SGMS1-211ENST00000626236 C2CD4CQ8TF44 421 aa6.24□□□□□ -1.41
SGMS1-211ENST00000626236 C11orf52Q96A22 123 aa6.24□□□□□ -1.41
SGMS1-211ENST00000626236 ODF3Q96PU9 254 aa6.24□□□□□ -1.41
SGMS1-211ENST00000626236 NDFIP1Q9BT67 221 aa6.24□□□□□ -1.41
SGMS1-211ENST00000626236 DERL1Q9BUN8 251 aa6.24□□□□□ -1.41
SGMS1-211ENST00000626236 CSTL1Q9H114 145 aa6.24□□□□□ -1.41
SGMS1-211ENST00000626236 XCL2Q9UBD3 114 aa6.24□□□□□ -1.41
SGMS1-211ENST00000626236 KIR2DL5BA0A0G2JN68 375 aa6.23□□□□□ -1.41
SGMS1-211ENST00000626236 KIR2DL5BA0A0G2JPC4 375 aa6.23□□□□□ -1.41
SGMS1-211ENST00000626236 RAB19A4D1S5 217 aa6.23□□□□□ -1.41
SGMS1-211ENST00000626236 S100A9P06702 114 aaKnown RBP6.23□□□□□ -1.41
SGMS1-211ENST00000626236 SRP19P09132 144 aaKnown RBP6.23□□□□□ -1.41
SGMS1-211ENST00000626236 TSPOP30536 169 aa6.23□□□□□ -1.41
SGMS1-211ENST00000626236 KIR3DS1Q14943 382 aa6.23□□□□□ -1.41
SGMS1-211ENST00000626236 TMEM183BQ1AE95 376 aa6.23□□□□□ -1.41
SGMS1-211ENST00000626236 ZNF674Q2M3X9 581 aa6.23□□□□□ -1.41
SGMS1-211ENST00000626236 KIR2DL5AQ8N109 375 aa6.23□□□□□ -1.41
SGMS1-211ENST00000626236 KIR2DL5BQ8NHK3 375 aa6.23□□□□□ -1.41
SGMS1-211ENST00000626236 FAM19A4Q96LR4 140 aa6.23□□□□□ -1.41
SGMS1-211ENST00000626236 C1QTNF4Q9BXJ3 329 aa6.23□□□□□ -1.41
SGMS1-211ENST00000626236 TREM1Q9NP99 234 aa6.23□□□□□ -1.41
SGMS1-211ENST00000626236 KLF12Q9Y4X4 402 aa6.23□□□□□ -1.41
SGMS1-211ENST00000626236 LENEPQ9Y5L5 61 aa6.23□□□□□ -1.41
SGMS1-211ENST00000626236 TRBV7-9A0A0J9YWB2 115 aa6.22□□□□□ -1.41
SGMS1-211ENST00000626236 TRBV6-1A0A0K0K1D8 114 aa6.22□□□□□ -1.41
SGMS1-211ENST00000626236 C9JQL5 133 aa6.22□□□□□ -1.41
SGMS1-211ENST00000626236 TMEM250H0YL14 139 aa6.22□□□□□ -1.41
SGMS1-211ENST00000626236 UBE2CO00762 179 aa6.22□□□□□ -1.41
SGMS1-211ENST00000626236 INSP01308 110 aa6.22□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 41.6 ms