RNA–Protein interactions for RNA: ENST00000622836.1

PCDHGC3-208, Transcript of protocadherin gamma subfamily C, 3, humanhuman

TSL 3

Gene PCDHGC3, Length 795 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGC3-208ENST00000622836 CCDC28AQ8IWP9 274 aa10.01□□□□□ -0.81
PCDHGC3-208ENST00000622836 NIPSNAP3BQ9BS92 247 aa10.01□□□□□ -0.81
PCDHGC3-208ENST00000622836 ACTR3CQ9C0K3 210 aaPredicted RBP10.01□□□□□ -0.81
PCDHGC3-208ENST00000622836 AGPAT4-IT1Q9H0P7 198 aa10.01□□□□□ -0.81
PCDHGC3-208ENST00000622836 DKK2Q9UBU2 259 aa10.01□□□□□ -0.81
PCDHGC3-208ENST00000622836 RPH3ALQ9UNE2 315 aa10.01□□□□□ -0.81
PCDHGC3-208ENST00000622836 TRAV12-3A0A0B4J271 114 aa10□□□□□ -0.81
PCDHGC3-208ENST00000622836 LY6G6CO95867 125 aa10□□□□□ -0.81
PCDHGC3-208ENST00000622836 SLC25A5P05141 298 aaKnown RBP10□□□□□ -0.81
PCDHGC3-208ENST00000622836 AKR1C8PQ5T2L2 129 aa10□□□□□ -0.81
PCDHGC3-208ENST00000622836 C9orf47Q6ZRZ4 202 aa10□□□□□ -0.81
PCDHGC3-208ENST00000622836 IQCF2Q8IXL9 164 aa10□□□□□ -0.81
PCDHGC3-208ENST00000622836 RXFP4Q8TDU9 374 aa10□□□□□ -0.81
PCDHGC3-208ENST00000622836 RAB24Q969Q5 203 aa10□□□□□ -0.81
PCDHGC3-208ENST00000622836 C16orf74Q96GX8 76 aa10□□□□□ -0.81
PCDHGC3-208ENST00000622836 VGLL1Q99990 258 aa10□□□□□ -0.81
PCDHGC3-208ENST00000622836 ARPC5LQ9BPX5 153 aa10□□□□□ -0.81
PCDHGC3-208ENST00000622836 C7orf71A4D174 169 aa9.99□□□□□ -0.81
PCDHGC3-208ENST00000622836 PGPA6NDG6 321 aa9.99□□□□□ -0.81
PCDHGC3-208ENST00000622836 GPX1P07203 203 aa9.99□□□□□ -0.81
PCDHGC3-208ENST00000622836 STAG3L2P0CL84 134 aa9.99□□□□□ -0.81
PCDHGC3-208ENST00000622836 STAG3L3P0CL85 134 aa9.99□□□□□ -0.81
PCDHGC3-208ENST00000622836 AZU1P20160 251 aa9.99□□□□□ -0.81
PCDHGC3-208ENST00000622836 RNASE4P34096 147 aaKnown RBP9.99□□□□□ -0.81
PCDHGC3-208ENST00000622836 DAD1P61803 113 aa9.99□□□□□ -0.81
PCDHGC3-208ENST00000622836 LINC00476Q8WZB0 136 aa9.99□□□□□ -0.81
PCDHGC3-208ENST00000622836 OTORQ9NRC9 128 aa9.99□□□□□ -0.81
PCDHGC3-208ENST00000622836 RBAKDNA6NC62 111 aa9.98□□□□□ -0.81
PCDHGC3-208ENST00000622836 CXorf1O96002 111 aa9.98□□□□□ -0.81
PCDHGC3-208ENST00000622836 HTN3P15516 51 aa9.98□□□□□ -0.81
PCDHGC3-208ENST00000622836 ZNF138P52744 262 aa9.98□□□□□ -0.81
PCDHGC3-208ENST00000622836 ZNF345Q14585 488 aa9.98□□□□□ -0.81
PCDHGC3-208ENST00000622836 Q8TAT8 98 aa9.98□□□□□ -0.81
PCDHGC3-208ENST00000622836 PLA2G2EQ9NZK7 142 aa9.98□□□□□ -0.81
PCDHGC3-208ENST00000622836 ZNF492Q9P255 531 aa9.98□□□□□ -0.81
PCDHGC3-208ENST00000622836 KANTRA0A1W2PQU2 76 aa9.97□□□□□ -0.81
PCDHGC3-208ENST00000622836 LYRM9A8MSI8 78 aa9.97□□□□□ -0.81
PCDHGC3-208ENST00000622836 DIRC3C9JPN6 131 aa9.97□□□□□ -0.81
PCDHGC3-208ENST00000622836 DEFB130BP0DP73 79 aa9.97□□□□□ -0.81
PCDHGC3-208ENST00000622836 DEFB130AP0DP74 79 aa9.97□□□□□ -0.81
PCDHGC3-208ENST00000622836 GCHFRP30047 84 aa9.97□□□□□ -0.81
PCDHGC3-208ENST00000622836 TCTAP57738 103 aa9.97□□□□□ -0.81
PCDHGC3-208ENST00000622836 BTN1A1Q13410 526 aa9.97□□□□□ -0.81
PCDHGC3-208ENST00000622836 ZNF493Q6ZR52 646 aa9.97□□□□□ -0.81
PCDHGC3-208ENST00000622836 KCNRGQ8N5I3 272 aa9.97□□□□□ -0.81
PCDHGC3-208ENST00000622836 TMEM263Q8WUH6 116 aaKnown RBP9.97□□□□□ -0.81
PCDHGC3-208ENST00000622836 PYGO2Q9BRQ0 406 aa9.97□□□□□ -0.81
PCDHGC3-208ENST00000622836 DYNC2H1Q8NCM8 4307 aaKnown RBP9.96□□□□□ -0.81
PCDHGC3-208ENST00000622836 IGHV4-4A0A075B6R2 117 aa9.96□□□□□ -0.82
PCDHGC3-208ENST00000622836 A0A0D9SG52 128 aa9.96□□□□□ -0.82
PCDHGC3-208ENST00000622836 HMSDA8MTL9 139 aa9.96□□□□□ -0.82
PCDHGC3-208ENST00000622836 KLLNB2CW77 178 aa9.96□□□□□ -0.82
PCDHGC3-208ENST00000622836 PFDN1O60925 122 aa9.96□□□□□ -0.82
PCDHGC3-208ENST00000622836 NMBP08949 121 aa9.96□□□□□ -0.82
PCDHGC3-208ENST00000622836 CRISP2P16562 243 aa9.96□□□□□ -0.82
PCDHGC3-208ENST00000622836 CD300CQ08708 224 aa9.96□□□□□ -0.82
PCDHGC3-208ENST00000622836 GOLT1AQ6ZVE7 132 aa9.96□□□□□ -0.82
PCDHGC3-208ENST00000622836 OR11H4Q8NGC9 324 aa9.96□□□□□ -0.82
PCDHGC3-208ENST00000622836 FAM19A4Q96LR4 140 aa9.96□□□□□ -0.82
PCDHGC3-208ENST00000622836 CYTL1Q9NRR1 136 aa9.96□□□□□ -0.82
PCDHGC3-208ENST00000622836 TMEM167BQ9NRX6 74 aa9.96□□□□□ -0.82
PCDHGC3-208ENST00000622836 TIMM8BQ9Y5J9 83 aaPredicted RBP9.96□□□□□ -0.82
PCDHGC3-208ENST00000622836 RYR3Q15413 4870 aa9.96□□□□□ -0.82
PCDHGC3-208ENST00000622836 CTXND1A0A1B0GTU2 59 aa9.95□□□□□ -0.82
PCDHGC3-208ENST00000622836 CBY3A6NI87 242 aa9.95□□□□□ -0.82
PCDHGC3-208ENST00000622836 SNURFLB1AK76 121 aa9.95□□□□□ -0.82
PCDHGC3-208ENST00000622836 RGS13O14921 159 aa9.95□□□□□ -0.82
PCDHGC3-208ENST00000622836 SSX7Q7RTT5 188 aa9.95□□□□□ -0.82
PCDHGC3-208ENST00000622836 RNASE8Q8TDE3 154 aaKnown RBP9.95□□□□□ -0.82
PCDHGC3-208ENST00000622836 NDUFAF3Q9BU61 184 aa9.95□□□□□ -0.82
PCDHGC3-208ENST00000622836 ZNF471Q9BX82 626 aaPredicted RBP9.95□□□□□ -0.82
PCDHGC3-208ENST00000622836 NOP10Q9NPE3 64 aaKnown RBP9.95□□□□□ -0.82
PCDHGC3-208ENST00000622836 TRBV7-9A0A0J9YWB2 115 aa9.94□□□□□ -0.82
PCDHGC3-208ENST00000622836 PLAC8L1A1L4L8 177 aa9.94□□□□□ -0.82
PCDHGC3-208ENST00000622836 K7EQM0 130 aa9.94□□□□□ -0.82
PCDHGC3-208ENST00000622836 BCL2L11O43521 198 aa9.94□□□□□ -0.82
PCDHGC3-208ENST00000622836 GNG5P63218 68 aa9.94□□□□□ -0.82
PCDHGC3-208ENST00000622836 ZFAND2AQ8N6M9 145 aa9.94□□□□□ -0.82
PCDHGC3-208ENST00000622836 ST6GAL2Q96JF0 529 aa9.94□□□□□ -0.82
PCDHGC3-208ENST00000622836 APLNQ9ULZ1 77 aa9.94□□□□□ -0.82
PCDHGC3-208ENST00000622836 hCG_2014768A0A024R1R8 64 aa9.93□□□□□ -0.82
PCDHGC3-208ENST00000622836 FGF8P55075 233 aaPredicted RBP9.93□□□□□ -0.82
PCDHGC3-208ENST00000622836 EIF5AP63241 154 aaKnown RBP9.93□□□□□ -0.82
PCDHGC3-208ENST00000622836 ZNF726P1Q15940 193 aa9.93□□□□□ -0.82
PCDHGC3-208ENST00000622836 PRR9Q5T870 116 aa9.93□□□□□ -0.82
PCDHGC3-208ENST00000622836 Q6ZNX1 250 aa9.93□□□□□ -0.82
PCDHGC3-208ENST00000622836 EIF4E3Q8N5X7 224 aaKnown RBP9.93□□□□□ -0.82
PCDHGC3-208ENST00000622836 ARL6IP6Q8N6S5 226 aa9.93□□□□□ -0.82
PCDHGC3-208ENST00000622836 C5orf17Q8NAS9 161 aa9.93□□□□□ -0.82
PCDHGC3-208ENST00000622836 RYR2Q92736 4967 aa9.92□□□□□ -0.82
PCDHGC3-208ENST00000622836 SERTM2A0A1B0GWG4 89 aa9.92□□□□□ -0.82
PCDHGC3-208ENST00000622836 MAP1LC3B2A6NCE7 125 aa9.92□□□□□ -0.82
PCDHGC3-208ENST00000622836 ZNF324O75467 553 aaPredicted RBP9.92□□□□□ -0.82
PCDHGC3-208ENST00000622836 SUMO1P63165 101 aaKnown RBP9.92□□□□□ -0.82
PCDHGC3-208ENST00000622836 LGALS9CQ6DKI2 356 aa9.92□□□□□ -0.82
PCDHGC3-208ENST00000622836 ZNF680Q8NEM1 530 aa9.92□□□□□ -0.82
PCDHGC3-208ENST00000622836 STOML3Q8TAV4 291 aa9.92□□□□□ -0.82
PCDHGC3-208ENST00000622836 SUN5Q8TC36 379 aa9.92□□□□□ -0.82
PCDHGC3-208ENST00000622836 TMED6Q8WW62 240 aa9.92□□□□□ -0.82
PCDHGC3-208ENST00000622836 NDFIP1Q9BT67 221 aa9.92□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 37.1 ms