RNA–Protein interactions for RNA: ENST00000621396.4

CBWD3-216, Transcript of COBW domain containing 3, humanhuman

TSL 2

Gene CBWD3, Length 2,437 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBWD3-216ENST00000621396 J3KRW8 73 aa11.92□□□□□ -0.5
CBWD3-216ENST00000621396 K7EQM0 130 aa11.92□□□□□ -0.5
CBWD3-216ENST00000621396 CA1P00915 261 aaPredicted RBP11.92□□□□□ -0.5
CBWD3-216ENST00000621396 ERVFC1-1P60608 527 aa11.92□□□□□ -0.5
CBWD3-216ENST00000621396 TMEM75Q8N9X5 138 aa11.92□□□□□ -0.5
CBWD3-216ENST00000621396 SFRP2Q96HF1 295 aa11.92□□□□□ -0.5
CBWD3-216ENST00000621396 AGPAT4-IT1Q9H0P7 198 aa11.92□□□□□ -0.5
CBWD3-216ENST00000621396 MEOX2P50222 304 aa11.91□□□□□ -0.5
CBWD3-216ENST00000621396 MLST8Q9BVC4 326 aa11.91□□□□□ -0.5
CBWD3-216ENST00000621396 K7EQG2 157 aa11.91□□□□□ -0.5
CBWD3-216ENST00000621396 IGKV3-20P01619 116 aa11.91□□□□□ -0.5
CBWD3-216ENST00000621396 HIST1H1AQ02539 215 aaPredicted RBP11.9□□□□□ -0.5
CBWD3-216ENST00000621396 Q6ZQT7 251 aa11.9□□□□□ -0.5
CBWD3-216ENST00000621396 ZC2HC1AQ96GY0 325 aa11.9□□□□□ -0.5
CBWD3-216ENST00000621396 LINC00482Q8N8I6 264 aa11.9□□□□□ -0.5
CBWD3-216ENST00000621396 GCGP01275 180 aa11.89□□□□□ -0.51
CBWD3-216ENST00000621396 CRIP1P50238 77 aa11.89□□□□□ -0.51
CBWD3-216ENST00000621396 PAFAH1B2P68402 229 aa11.89□□□□□ -0.51
CBWD3-216ENST00000621396 KIR3DS1Q14943 382 aa11.89□□□□□ -0.51
CBWD3-216ENST00000621396 PRR25Q96S07 402 aa11.89□□□□□ -0.51
CBWD3-216ENST00000621396 MT-ND4LP03901 98 aa11.88□□□□□ -0.51
CBWD3-216ENST00000621396 IBA57Q5T440 356 aaKnown RBP11.88□□□□□ -0.51
CBWD3-216ENST00000621396 APRG1Q8IVJ8 170 aa11.88□□□□□ -0.51
CBWD3-216ENST00000621396 TMEM183AQ8IXX5 376 aa11.88□□□□□ -0.51
CBWD3-216ENST00000621396 PRELID1Q9Y255 219 aa11.88□□□□□ -0.51
CBWD3-216ENST00000621396 B4DEV8 164 aa11.88□□□□□ -0.51
CBWD3-216ENST00000621396 ID1P41134 155 aa11.88□□□□□ -0.51
CBWD3-216ENST00000621396 ZNF80P51504 273 aaPredicted RBP11.88□□□□□ -0.51
CBWD3-216ENST00000621396 FAM3BP58499 235 aaPredicted RBP11.88□□□□□ -0.51
CBWD3-216ENST00000621396 SNRPD3P62318 126 aaKnown RBP11.88□□□□□ -0.51
CBWD3-216ENST00000621396 H7BYZ3 331 aa11.87□□□□□ -0.51
CBWD3-216ENST00000621396 DEFB131AP59861 70 aa11.87□□□□□ -0.51
CBWD3-216ENST00000621396 TMEM78Q5T7P6 136 aa11.87□□□□□ -0.51
CBWD3-216ENST00000621396 NUDT10Q8NFP7 164 aa11.87□□□□□ -0.51
CBWD3-216ENST00000621396 OR8A1Q8NGG7 326 aa11.87□□□□□ -0.51
CBWD3-216ENST00000621396 OR10G8Q8NGN5 311 aa11.87□□□□□ -0.51
CBWD3-216ENST00000621396 NUDT11Q96G61 164 aa11.87□□□□□ -0.51
CBWD3-216ENST00000621396 ZNF256Q9Y2P7 627 aaPredicted RBP11.87□□□□□ -0.51
CBWD3-216ENST00000621396 RPL19P84098 196 aaKnown RBP11.87□□□□□ -0.51
CBWD3-216ENST00000621396 C3orf56Q8N813 242 aa11.87□□□□□ -0.51
CBWD3-216ENST00000621396 SMCO4Q9NRQ5 59 aa11.87□□□□□ -0.51
CBWD3-216ENST00000621396 LY96Q9Y6Y9 160 aa11.87□□□□□ -0.51
CBWD3-216ENST00000621396 CT45A10P0DMU9 189 aa11.86□□□□□ -0.51
CBWD3-216ENST00000621396 OR4B1Q8NGF8 309 aa11.86□□□□□ -0.51
CBWD3-216ENST00000621396 OR10J6PQ8NGY7 276 aa11.86□□□□□ -0.51
CBWD3-216ENST00000621396 A0A087WWC5 75 aa11.86□□□□□ -0.51
CBWD3-216ENST00000621396 KNCNA6PVL3 124 aa11.86□□□□□ -0.51
CBWD3-216ENST00000621396 S100A9P06702 114 aaKnown RBP11.86□□□□□ -0.51
CBWD3-216ENST00000621396 TCL1AP56279 114 aa11.86□□□□□ -0.51
CBWD3-216ENST00000621396 MRPL53Q96EL3 112 aaKnown RBP11.86□□□□□ -0.51
CBWD3-216ENST00000621396 ZFP30Q9Y2G7 519 aa11.86□□□□□ -0.51
CBWD3-216ENST00000621396 V9GYV3 84 aa11.86□□□□□ -0.51
CBWD3-216ENST00000621396 ZNF705GA8MUZ8 300 aaPredicted RBP11.85□□□□□ -0.51
CBWD3-216ENST00000621396 TGIF2-C20orf24A0A0A6YYL0 155 aa11.85□□□□□ -0.51
CBWD3-216ENST00000621396 SERTM2A0A1B0GWG4 89 aa11.85□□□□□ -0.51
CBWD3-216ENST00000621396 GZMBP10144 247 aa11.85□□□□□ -0.51
CBWD3-216ENST00000621396 ZNF138P52744 262 aa11.85□□□□□ -0.51
CBWD3-216ENST00000621396 ACTL10Q5JWF8 245 aa11.85□□□□□ -0.51
CBWD3-216ENST00000621396 PRR9Q5T870 116 aa11.85□□□□□ -0.51
CBWD3-216ENST00000621396 C9orf47Q6ZRZ4 202 aa11.85□□□□□ -0.51
CBWD3-216ENST00000621396 ZNF492Q9P255 531 aa11.85□□□□□ -0.51
CBWD3-216ENST00000621396 RBAKDNA6NC62 111 aa11.84□□□□□ -0.51
CBWD3-216ENST00000621396 SPINK4O60575 86 aa11.84□□□□□ -0.51
CBWD3-216ENST00000621396 IGLV1-51P01701 117 aa11.84□□□□□ -0.51
CBWD3-216ENST00000621396 WFDC10AQ9H1F0 79 aa11.84□□□□□ -0.51
CBWD3-216ENST00000621396 TMSB15BA0A087X1C1 80 aa11.84□□□□□ -0.51
CBWD3-216ENST00000621396 CXCL1P09341 107 aa11.84□□□□□ -0.51
CBWD3-216ENST00000621396 ELOBQ15370 118 aa11.84□□□□□ -0.51
CBWD3-216ENST00000621396 ANAPC16Q96DE5 110 aa11.84□□□□□ -0.51
CBWD3-216ENST00000621396 CLEC5AQ9NY25 188 aa11.84□□□□□ -0.51
CBWD3-216ENST00000621396 CD7P09564 240 aa11.83□□□□□ -0.52
CBWD3-216ENST00000621396 ARL6IP6Q8N6S5 226 aa11.83□□□□□ -0.52
CBWD3-216ENST00000621396 C15orf54Q8N8G6 183 aa11.83□□□□□ -0.52
CBWD3-216ENST00000621396 MAP6D1Q9H9H5 199 aa11.83□□□□□ -0.52
CBWD3-216ENST00000621396 SIGLEC8Q9NYZ4 499 aa11.83□□□□□ -0.52
CBWD3-216ENST00000621396 A0A1W2PPQ1 181 aa11.82□□□□□ -0.52
CBWD3-216ENST00000621396 ODF3L2Q3SX64 289 aa11.82□□□□□ -0.52
CBWD3-216ENST00000621396 DAZAP1Q96EP5 407 aaKnown RBP11.82□□□□□ -0.52
CBWD3-216ENST00000621396 SPAG8Q99932 426 aaPredicted RBP11.82□□□□□ -0.52
CBWD3-216ENST00000621396 A0A0J9YX75 114 aa11.82□□□□□ -0.52
CBWD3-216ENST00000621396 TRBV6-1A0A0K0K1D8 114 aa11.82□□□□□ -0.52
CBWD3-216ENST00000621396 C19orf71A6NCJ1 209 aa11.82□□□□□ -0.52
CBWD3-216ENST00000621396 COLCA2A8K830 154 aa11.82□□□□□ -0.52
CBWD3-216ENST00000621396 NPIPB6E9PJ23 425 aa11.82□□□□□ -0.52
CBWD3-216ENST00000621396 P01737 135 aa11.82□□□□□ -0.52
CBWD3-216ENST00000621396 FXYD7P58549 80 aa11.82□□□□□ -0.52
CBWD3-216ENST00000621396 SAPCD1Q5SSQ6 148 aa11.82□□□□□ -0.52
CBWD3-216ENST00000621396 C12orf54Q6X4T0 127 aa11.82□□□□□ -0.52
CBWD3-216ENST00000621396 CTDSP1Q9GZU7 261 aa11.82□□□□□ -0.52
CBWD3-216ENST00000621396 TMA7Q9Y2S6 64 aaKnown RBP11.82□□□□□ -0.52
CBWD3-216ENST00000621396 TRAV12-2A0A075B6T6 113 aa11.81□□□□□ -0.52
CBWD3-216ENST00000621396 M0R2Z0 102 aa11.81□□□□□ -0.52
CBWD3-216ENST00000621396 SH2D1AO60880 128 aa11.81□□□□□ -0.52
CBWD3-216ENST00000621396 FRMD6-AS1P0C7T7 363 aa11.81□□□□□ -0.52
CBWD3-216ENST00000621396 SSTP61278 116 aa11.81□□□□□ -0.52
CBWD3-216ENST00000621396 NDFIP1Q9BT67 221 aa11.81□□□□□ -0.52
CBWD3-216ENST00000621396 OSTCQ9NRP0 149 aa11.81□□□□□ -0.52
CBWD3-216ENST00000621396 TMEM242Q9NWH2 141 aa11.81□□□□□ -0.52
CBWD3-216ENST00000621396 OR4C46A6NHA9 309 aa11.81□□□□□ -0.52
CBWD3-216ENST00000621396 GATCO43716 136 aaKnown RBP11.81□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 43.4 ms