RNA–Protein interactions for RNA: ENST00000621245.4

CPNE3-210, Transcript of copine 3, humanhuman

TSL 5

Gene CPNE3, Length 581 nt, Biotype protein coding, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE3-210ENST00000621245 RAB32Q13637 225 aa7.92□□□□□ -1.14
CPNE3-210ENST00000621245 SOHLH1Q5JUK2 328 aa7.92□□□□□ -1.14
CPNE3-210ENST00000621245 PRR9Q5T870 116 aa7.92□□□□□ -1.14
CPNE3-210ENST00000621245 Q6ZTI0 123 aa7.92□□□□□ -1.14
CPNE3-210ENST00000621245 OR10J6PQ8NGY7 276 aa7.92□□□□□ -1.14
CPNE3-210ENST00000621245 ZNF431Q8TF32 576 aaPredicted RBP7.92□□□□□ -1.14
CPNE3-210ENST00000621245 DNAJC4Q9NNZ3 241 aa7.92□□□□□ -1.14
CPNE3-210ENST00000621245 UQCC1Q9NVA1 299 aa7.92□□□□□ -1.14
CPNE3-210ENST00000621245 PXMP4Q9Y6I8 212 aa7.92□□□□□ -1.14
CPNE3-210ENST00000621245 C16orf90A8MZG2 172 aa7.91□□□□□ -1.14
CPNE3-210ENST00000621245 BAXQ07812 192 aa7.91□□□□□ -1.14
CPNE3-210ENST00000621245 CD300CQ08708 224 aa7.91□□□□□ -1.14
CPNE3-210ENST00000621245 ZNF846Q147U1 533 aa7.91□□□□□ -1.14
CPNE3-210ENST00000621245 ESRGQ1W209 222 aa7.91□□□□□ -1.14
CPNE3-210ENST00000621245 ZNF493Q6ZR52 646 aa7.91□□□□□ -1.14
CPNE3-210ENST00000621245 EXOC3-AS1Q8N2X6 119 aa7.91□□□□□ -1.14
CPNE3-210ENST00000621245 C12orf45Q8N5I9 185 aaPredicted RBP7.91□□□□□ -1.14
CPNE3-210ENST00000621245 C2orf50Q96LR7 162 aa7.91□□□□□ -1.14
CPNE3-210ENST00000621245 LYRM2Q9NU23 88 aaPredicted RBP7.91□□□□□ -1.14
CPNE3-210ENST00000621245 SLC39A9Q9NUM3 307 aa7.91□□□□□ -1.14
CPNE3-210ENST00000621245 TRBV19A0A075B6N1 114 aa7.9□□□□□ -1.14
CPNE3-210ENST00000621245 IGKV2-40A0A087WW87 121 aaPredicted RBP7.9□□□□□ -1.14
CPNE3-210ENST00000621245 IGKV2D-40P01614 121 aaPredicted RBP7.9□□□□□ -1.14
CPNE3-210ENST00000621245 M6PRP20645 277 aa7.9□□□□□ -1.14
CPNE3-210ENST00000621245 FGF7P21781 194 aa7.9□□□□□ -1.14
CPNE3-210ENST00000621245 CCL18P55774 89 aa7.9□□□□□ -1.14
CPNE3-210ENST00000621245 CLINT1Q14677 625 aa7.9□□□□□ -1.14
CPNE3-210ENST00000621245 TMEM252Q8N6L7 170 aa7.9□□□□□ -1.14
CPNE3-210ENST00000621245 C11orf72Q8NBR9 251 aa7.9□□□□□ -1.14
CPNE3-210ENST00000621245 RXFP4Q8TDU9 374 aa7.9□□□□□ -1.14
CPNE3-210ENST00000621245 GNPNAT1Q96EK6 184 aaPredicted RBP7.9□□□□□ -1.14
CPNE3-210ENST00000621245 VSIG2Q96IQ7 327 aa7.9□□□□□ -1.14
CPNE3-210ENST00000621245 FAM19A4Q96LR4 140 aa7.9□□□□□ -1.14
CPNE3-210ENST00000621245 C20orf144Q9BQM9 153 aa7.9□□□□□ -1.14
CPNE3-210ENST00000621245 SLC25A2Q9BXI2 301 aa7.9□□□□□ -1.14
CPNE3-210ENST00000621245 GSN-AS1Q9NRJ2 163 aa7.9□□□□□ -1.14
CPNE3-210ENST00000621245 SIX6O95475 246 aa7.89□□□□□ -1.15
CPNE3-210ENST00000621245 FUSP35637 526 aaKnown RBP eCLIP7.89□□□□□ -1.15
CPNE3-210ENST00000621245 LEPP41159 167 aa7.89□□□□□ -1.15
CPNE3-210ENST00000621245 RPL29P47914 159 aaKnown RBP7.89□□□□□ -1.15
CPNE3-210ENST00000621245 SULT1A1P50225 295 aa7.89□□□□□ -1.15
CPNE3-210ENST00000621245 KRTAP10-2P60368 255 aa7.89□□□□□ -1.15
CPNE3-210ENST00000621245 GAGE13Q4V321 117 aa7.89□□□□□ -1.15
CPNE3-210ENST00000621245 S100A7AQ86SG5 101 aa7.89□□□□□ -1.15
CPNE3-210ENST00000621245 OR1L4Q8NGR5 311 aa7.89□□□□□ -1.15
CPNE3-210ENST00000621245 BLNKQ8WV28 456 aa7.89□□□□□ -1.15
CPNE3-210ENST00000621245 FAM167A-AS1Q96KT0 104 aa7.89□□□□□ -1.15
CPNE3-210ENST00000621245 ODF3Q96PU9 254 aa7.89□□□□□ -1.15
CPNE3-210ENST00000621245 AGPAT4-IT1Q9H0P7 198 aa7.89□□□□□ -1.15
CPNE3-210ENST00000621245 Q9H8V8 135 aa7.89□□□□□ -1.15
CPNE3-210ENST00000621245 TP53TG3Q9ULZ0 132 aa7.89□□□□□ -1.15
CPNE3-210ENST00000621245 KLF12Q9Y4X4 402 aa7.89□□□□□ -1.15
CPNE3-210ENST00000621245 C7orf71A4D174 169 aa7.88□□□□□ -1.15
CPNE3-210ENST00000621245 SNURFLB1AK76 121 aa7.88□□□□□ -1.15
CPNE3-210ENST00000621245 KLLNB2CW77 178 aa7.88□□□□□ -1.15
CPNE3-210ENST00000621245 ZNF324O75467 553 aaPredicted RBP7.88□□□□□ -1.15
CPNE3-210ENST00000621245 RLN2P04090 185 aa7.88□□□□□ -1.15
CPNE3-210ENST00000621245 NHLH2Q02577 135 aa7.88□□□□□ -1.15
CPNE3-210ENST00000621245 CNPY1Q3B7I2 92 aa7.88□□□□□ -1.15
CPNE3-210ENST00000621245 Q6ZRG5 221 aa7.88□□□□□ -1.15
CPNE3-210ENST00000621245 MIR17HGQ75NE6 70 aa7.88□□□□□ -1.15
CPNE3-210ENST00000621245 SPATA12Q7Z6I5 190 aa7.88□□□□□ -1.15
CPNE3-210ENST00000621245 CCDC28AQ8IWP9 274 aa7.88□□□□□ -1.15
CPNE3-210ENST00000621245 THAP6Q8TBB0 222 aa7.88□□□□□ -1.15
CPNE3-210ENST00000621245 PFDN5Q99471 154 aa7.88□□□□□ -1.15
CPNE3-210ENST00000621245 VGLL1Q99990 258 aa7.88□□□□□ -1.15
CPNE3-210ENST00000621245 NPCDR1Q9BY65 106 aa7.88□□□□□ -1.15
CPNE3-210ENST00000621245 GPN1Q9HCN4 374 aaPredicted RBP7.88□□□□□ -1.15
CPNE3-210ENST00000621245 OR5AC2Q9NZP5 309 aa7.88□□□□□ -1.15
CPNE3-210ENST00000621245 A0A096LPF7 62 aa7.87□□□□□ -1.15
CPNE3-210ENST00000621245 H0YIZ8 118 aa7.87□□□□□ -1.15
CPNE3-210ENST00000621245 EIF3GO75821 320 aaKnown RBP eCLIP7.87□□□□□ -1.15
CPNE3-210ENST00000621245 RNASE4P34096 147 aaKnown RBP7.87□□□□□ -1.15
CPNE3-210ENST00000621245 DAZ2Q13117 558 aaKnown RBP7.87□□□□□ -1.15
CPNE3-210ENST00000621245 RAB31Q13636 194 aa7.87□□□□□ -1.15
CPNE3-210ENST00000621245 GUK1Q16774 197 aa7.87□□□□□ -1.15
CPNE3-210ENST00000621245 ZFAND2AQ8N6M9 145 aa7.87□□□□□ -1.15
CPNE3-210ENST00000621245 Q8TAT8 98 aa7.87□□□□□ -1.15
CPNE3-210ENST00000621245 PHYHIPLQ96FC7 376 aa7.87□□□□□ -1.15
CPNE3-210ENST00000621245 PYGO2Q9BRQ0 406 aa7.87□□□□□ -1.15
CPNE3-210ENST00000621245 Q9H3A6 140 aa7.87□□□□□ -1.15
CPNE3-210ENST00000621245 TMEM14CQ9P0S9 112 aa7.87□□□□□ -1.15
CPNE3-210ENST00000621245 RNF24Q9Y225 148 aa7.87□□□□□ -1.15
CPNE3-210ENST00000621245 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP7.87□□□□□ -1.15
CPNE3-210ENST00000621245 TRGV1A0A0A0MS02 117 aa7.86□□□□□ -1.15
CPNE3-210ENST00000621245 SCO2A0A1W2PP80 73 aa7.86□□□□□ -1.15
CPNE3-210ENST00000621245 ZNF253O75346 499 aa7.86□□□□□ -1.15
CPNE3-210ENST00000621245 IGHV3-53P01767 116 aa7.86□□□□□ -1.15
CPNE3-210ENST00000621245 SLC25A5P05141 298 aaKnown RBP7.86□□□□□ -1.15
CPNE3-210ENST00000621245 HIST1H1EP10412 219 aaKnown RBP7.86□□□□□ -1.15
CPNE3-210ENST00000621245 S100A11P31949 105 aa7.86□□□□□ -1.15
CPNE3-210ENST00000621245 ICAM4Q14773 271 aa7.86□□□□□ -1.15
CPNE3-210ENST00000621245 FAM122CQ6P4D5 195 aa7.86□□□□□ -1.15
CPNE3-210ENST00000621245 STX12Q86Y82 276 aa7.86□□□□□ -1.15
CPNE3-210ENST00000621245 MAPKAPK5-AS1Q8N8E1 139 aa7.86□□□□□ -1.15
CPNE3-210ENST00000621245 MRPL53Q96EL3 112 aaKnown RBP7.86□□□□□ -1.15
CPNE3-210ENST00000621245 UPK3BQ9BT76 320 aa7.86□□□□□ -1.15
CPNE3-210ENST00000621245 MRPL16Q9NX20 251 aaKnown RBP7.86□□□□□ -1.15
CPNE3-210ENST00000621245 MRPS16Q9Y3D3 137 aaKnown RBP7.86□□□□□ -1.15
CPNE3-210ENST00000621245 PKHD1L1Q86WI1 4243 aa7.86□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 43.1 ms