RNA–Protein interactions for RNA: ENST00000620103.4

MUC1-228, Transcript of mucin 1, cell surface associated, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene MUC1, Length 1,811 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MUC1-228ENST00000620103 KCNS1Q96KK3 526 aa11.51□□□□□ -0.57
MUC1-228ENST00000620103 TMEM140Q9NV12 185 aa11.51□□□□□ -0.57
MUC1-228ENST00000620103 STARD9Q9P2P6 4700 aa11.5□□□□□ -0.57
MUC1-228ENST00000620103 TRAV30A0A087WSZ9 112 aa11.5□□□□□ -0.57
MUC1-228ENST00000620103 TRBV7-1A0A0A6YYK4 115 aa11.5□□□□□ -0.57
MUC1-228ENST00000620103 TMEM213A2RRL7 107 aa11.5□□□□□ -0.57
MUC1-228ENST00000620103 HMGB3O15347 200 aaKnown RBP11.5□□□□□ -0.57
MUC1-228ENST00000620103 NDUFB4O95168 129 aa11.5□□□□□ -0.57
MUC1-228ENST00000620103 CD7P09564 240 aa11.5□□□□□ -0.57
MUC1-228ENST00000620103 ZNF114Q8NC26 417 aa11.5□□□□□ -0.57
MUC1-228ENST00000620103 OR10P1Q8NGE3 313 aa11.5□□□□□ -0.57
MUC1-228ENST00000620103 OR1L6Q8NGR2 347 aa11.5□□□□□ -0.57
MUC1-228ENST00000620103 S4R3C0 116 aa11.5□□□□□ -0.57
MUC1-228ENST00000620103 C9JCJ5 164 aa11.49□□□□□ -0.57
MUC1-228ENST00000620103 P0C879 139 aa11.49□□□□□ -0.57
MUC1-228ENST00000620103 DEFA4P12838 97 aa11.49□□□□□ -0.57
MUC1-228ENST00000620103 ATP5G3P48201 142 aa11.49□□□□□ -0.57
MUC1-228ENST00000620103 KRTDAPP60985 99 aa11.49□□□□□ -0.57
MUC1-228ENST00000620103 FAM106AQ4KMX7 169 aa11.49□□□□□ -0.57
MUC1-228ENST00000620103 ZNF502Q8TBZ5 544 aa11.49□□□□□ -0.57
MUC1-228ENST00000620103 QTRT1Q9BXR0 403 aaKnown RBP11.49□□□□□ -0.57
MUC1-228ENST00000620103 COMMD5Q9GZQ3 224 aa11.49□□□□□ -0.57
MUC1-228ENST00000620103 PLEKHA3Q9HB20 300 aa11.49□□□□□ -0.57
MUC1-228ENST00000620103 NRN1Q9NPD7 142 aa11.49□□□□□ -0.57
MUC1-228ENST00000620103 MRPL27Q9P0M9 148 aaKnown RBP11.49□□□□□ -0.57
MUC1-228ENST00000620103 CLEC3BP05452 202 aa11.49□□□□□ -0.57
MUC1-228ENST00000620103 RHOBP62745 196 aa11.49□□□□□ -0.57
MUC1-228ENST00000620103 PMCHL1Q16048 86 aa11.49□□□□□ -0.57
MUC1-228ENST00000620103 TSPOP30536 169 aa11.48□□□□□ -0.57
MUC1-228ENST00000620103 DEFB125Q8N687 156 aa11.48□□□□□ -0.57
MUC1-228ENST00000620103 CACNG8Q8WXS5 425 aa11.48□□□□□ -0.57
MUC1-228ENST00000620103 C11orf52Q96A22 123 aa11.48□□□□□ -0.57
MUC1-228ENST00000620103 LYSTQ99698 3801 aa11.48□□□□□ -0.57
MUC1-228ENST00000620103 TRBV20OR9-2A0A075B6H5 130 aa11.47□□□□□ -0.57
MUC1-228ENST00000620103 RBMY1BA6NDE4 496 aaKnown RBP11.47□□□□□ -0.57
MUC1-228ENST00000620103 RBMY1EA6NEQ0 496 aaKnown RBP11.47□□□□□ -0.57
MUC1-228ENST00000620103 OR10J4P0C629 311 aa11.47□□□□□ -0.57
MUC1-228ENST00000620103 RBMY1DP0C7P1 496 aaKnown RBP11.47□□□□□ -0.57
MUC1-228ENST00000620103 C8orf88P0DMB2 117 aa11.47□□□□□ -0.57
MUC1-228ENST00000620103 WT1-ASQ06250 92 aa11.47□□□□□ -0.57
MUC1-228ENST00000620103 TMEM61Q8N0U2 210 aa11.47□□□□□ -0.57
MUC1-228ENST00000620103 OR10W1Q8NGF6 305 aa11.47□□□□□ -0.57
MUC1-228ENST00000620103 DERL1Q9BUN8 251 aa11.47□□□□□ -0.57
MUC1-228ENST00000620103 THYN1Q9P016 225 aa11.47□□□□□ -0.57
MUC1-228ENST00000620103 WDR83OSQ9Y284 106 aa11.47□□□□□ -0.57
MUC1-228ENST00000620103 DNAH1Q9P2D7 4330 aa11.47□□□□□ -0.57
MUC1-228ENST00000620103 TEX50A0A1B0GTY4 177 aa11.46□□□□□ -0.57
MUC1-228ENST00000620103 OR11H12B2RN74 326 aa11.46□□□□□ -0.57
MUC1-228ENST00000620103 MPDU1O75352 247 aa11.46□□□□□ -0.57
MUC1-228ENST00000620103 UNQ9165/PRO28630Q6UXU0 137 aa11.46□□□□□ -0.57
MUC1-228ENST00000620103 OR1L8Q8NGR8 309 aa11.46□□□□□ -0.57
MUC1-228ENST00000620103 WFDC10AQ9H1F0 79 aa11.46□□□□□ -0.57
MUC1-228ENST00000620103 NDUFA4L2Q9NRX3 87 aa11.46□□□□□ -0.57
MUC1-228ENST00000620103 SNURFLB1AK76 121 aa11.46□□□□□ -0.58
MUC1-228ENST00000620103 F2Z2F3 143 aa11.46□□□□□ -0.58
MUC1-228ENST00000620103 ZNF324O75467 553 aaPredicted RBP11.46□□□□□ -0.58
MUC1-228ENST00000620103 GPR183P32249 361 aa11.46□□□□□ -0.58
MUC1-228ENST00000620103 AMTP48728 403 aa11.46□□□□□ -0.58
MUC1-228ENST00000620103 ERVK-16P61578 105 aa11.46□□□□□ -0.58
MUC1-228ENST00000620103 ZFAND6Q6FIF0 208 aa11.46□□□□□ -0.58
MUC1-228ENST00000620103 OR4C5Q8NGB2 326 aa11.46□□□□□ -0.58
MUC1-228ENST00000620103 OCC1Q8TAD7 63 aa11.46□□□□□ -0.58
MUC1-228ENST00000620103 CTNNBIP1Q9NSA3 81 aaPredicted RBP11.46□□□□□ -0.58
MUC1-228ENST00000620103 A0A1W2PS18 150 aa11.45□□□□□ -0.58
MUC1-228ENST00000620103 CXorf1O96002 111 aa11.45□□□□□ -0.58
MUC1-228ENST00000620103 TM4SF20Q53R12 229 aa11.45□□□□□ -0.58
MUC1-228ENST00000620103 NIT1Q86X76 327 aa11.45□□□□□ -0.58
MUC1-228ENST00000620103 ATP6V0BQ99437 205 aa11.45□□□□□ -0.58
MUC1-228ENST00000620103 RETNQ9HD89 108 aa11.45□□□□□ -0.58
MUC1-228ENST00000620103 LCE6AA0A183 80 aa11.44□□□□□ -0.58
MUC1-228ENST00000620103 C3orf79P0CE67 100 aa11.44□□□□□ -0.58
MUC1-228ENST00000620103 STAG3L2P0CL84 134 aa11.44□□□□□ -0.58
MUC1-228ENST00000620103 STAG3L3P0CL85 134 aa11.44□□□□□ -0.58
MUC1-228ENST00000620103 MFAP2P55001 183 aa11.44□□□□□ -0.58
MUC1-228ENST00000620103 UHRF2Q96PU4 802 aa11.44□□□□□ -0.58
MUC1-228ENST00000620103 F11RQ9Y624 299 aaKnown RBP11.44□□□□□ -0.58
MUC1-228ENST00000620103 ARL2-SNX15V9GYD0 113 aa11.44□□□□□ -0.58
MUC1-228ENST00000620103 TRAV25A0A0B4J276 109 aa11.44□□□□□ -0.58
MUC1-228ENST00000620103 A0A1W2PPV4 95 aa11.44□□□□□ -0.58
MUC1-228ENST00000620103 OPRK1P41145 380 aa11.44□□□□□ -0.58
MUC1-228ENST00000620103 UFC1Q9Y3C8 167 aa11.44□□□□□ -0.58
MUC1-228ENST00000620103 PGPEP1LA6NFU8 196 aa11.43□□□□□ -0.58
MUC1-228ENST00000620103 G6PCP35575 357 aa11.43□□□□□ -0.58
MUC1-228ENST00000620103 TMEM136Q6ZRR5 245 aa11.43□□□□□ -0.58
MUC1-228ENST00000620103 TMEM190Q8WZ59 177 aa11.43□□□□□ -0.58
MUC1-228ENST00000620103 TMEM14BQ9NUH8 114 aa11.43□□□□□ -0.58
MUC1-228ENST00000620103 PRNDQ9UKY0 176 aa11.43□□□□□ -0.58
MUC1-228ENST00000620103 CHTOPQ9Y3Y2 248 aaKnown RBP11.43□□□□□ -0.58
MUC1-228ENST00000620103 OR51B2Q9Y5P1 312 aa11.43□□□□□ -0.58
MUC1-228ENST00000620103 SELENOKQ9Y6D0 94 aa11.43□□□□□ -0.58
MUC1-228ENST00000620103 V9GYV3 84 aa11.43□□□□□ -0.58
MUC1-228ENST00000620103 TRAV9-2A0A087WT02 112 aa11.42□□□□□ -0.58
MUC1-228ENST00000620103 SCO2A0A1W2PP80 73 aa11.42□□□□□ -0.58
MUC1-228ENST00000620103 HLA-DQA1P01909 254 aa11.42□□□□□ -0.58
MUC1-228ENST00000620103 HINT1P49773 126 aaPredicted RBP11.42□□□□□ -0.58
MUC1-228ENST00000620103 ETFRF1Q6IPR1 90 aa11.42□□□□□ -0.58
MUC1-228ENST00000620103 NUDT10Q8NFP7 164 aa11.42□□□□□ -0.58
MUC1-228ENST00000620103 IGHV3-35A0A0C4DH35 117 aa11.42□□□□□ -0.58
MUC1-228ENST00000620103 F8W735 103 aaPredicted RBP11.42□□□□□ -0.58
MUC1-228ENST00000620103 K7EIM0 57 aa11.42□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 49 ms