RNA–Protein interactions for RNA: ENST00000616944.4

CBWD1-225, Transcript of COBW domain containing 1, humanhuman

TSL 2

Gene CBWD1, Length 1,648 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBWD1-225ENST00000616944 MGAM2Q2M2H8 2515 aa11.28□□□□□ -0.6
CBWD1-225ENST00000616944 PGPEP1LA6NFU8 196 aa11.27□□□□□ -0.6
CBWD1-225ENST00000616944 FBLL1A6NHQ2 334 aaKnown RBP11.27□□□□□ -0.6
CBWD1-225ENST00000616944 NPIPB6E9PJ23 425 aa11.27□□□□□ -0.6
CBWD1-225ENST00000616944 GDF5OSQ5U4N7 250 aa11.27□□□□□ -0.6
CBWD1-225ENST00000616944 FAM110AQ9BQ89 295 aa11.27□□□□□ -0.6
CBWD1-225ENST00000616944 NIPSNAP3BQ9BS92 247 aa11.27□□□□□ -0.6
CBWD1-225ENST00000616944 MLST8Q9BVC4 326 aa11.27□□□□□ -0.6
CBWD1-225ENST00000616944 SDF2L1Q9HCN8 221 aa11.27□□□□□ -0.6
CBWD1-225ENST00000616944 PPP1R14DQ9NXH3 145 aa11.27□□□□□ -0.6
CBWD1-225ENST00000616944 A0A0J9YX75 114 aa11.27□□□□□ -0.61
CBWD1-225ENST00000616944 ZNF705DP0CH99 300 aaPredicted RBP11.27□□□□□ -0.61
CBWD1-225ENST00000616944 ZNF705BP0CI00 300 aaPredicted RBP11.27□□□□□ -0.61
CBWD1-225ENST00000616944 GNG4P50150 75 aa11.27□□□□□ -0.61
CBWD1-225ENST00000616944 DEFB131AP59861 70 aa11.27□□□□□ -0.61
CBWD1-225ENST00000616944 ERCC8Q13216 396 aa11.27□□□□□ -0.61
CBWD1-225ENST00000616944 PRR31Q5SQ13 230 aa11.27□□□□□ -0.61
CBWD1-225ENST00000616944 AGPAT4-IT1Q9H0P7 198 aa11.27□□□□□ -0.61
CBWD1-225ENST00000616944 SAV1Q9H4B6 383 aaPredicted RBP11.27□□□□□ -0.61
CBWD1-225ENST00000616944 C19orf73Q9NVV2 129 aa11.27□□□□□ -0.61
CBWD1-225ENST00000616944 NAT8Q9UHE5 227 aa11.27□□□□□ -0.61
CBWD1-225ENST00000616944 PSG8Q9UQ74 426 aa11.27□□□□□ -0.61
CBWD1-225ENST00000616944 LY96Q9Y6Y9 160 aa11.27□□□□□ -0.61
CBWD1-225ENST00000616944 S100A1P23297 94 aa11.26□□□□□ -0.61
CBWD1-225ENST00000616944 TMEM241Q24JQ0 296 aa11.26□□□□□ -0.61
CBWD1-225ENST00000616944 FOXI2Q6ZQN5 318 aa11.26□□□□□ -0.61
CBWD1-225ENST00000616944 LINC01551Q86U37 167 aa11.26□□□□□ -0.61
CBWD1-225ENST00000616944 Q8TAT8 98 aa11.26□□□□□ -0.61
CBWD1-225ENST00000616944 TVP23CQ96ET8 276 aa11.26□□□□□ -0.61
CBWD1-225ENST00000616944 SMIM12Q96EX1 92 aa11.26□□□□□ -0.61
CBWD1-225ENST00000616944 APOC3P02656 99 aa11.25□□□□□ -0.61
CBWD1-225ENST00000616944 CD7P09564 240 aa11.25□□□□□ -0.61
CBWD1-225ENST00000616944 RPL23P62829 140 aaKnown RBP11.25□□□□□ -0.61
CBWD1-225ENST00000616944 PRNTQ86SH4 94 aa11.25□□□□□ -0.61
CBWD1-225ENST00000616944 OR10J6PQ8NGY7 276 aa11.25□□□□□ -0.61
CBWD1-225ENST00000616944 OCC1Q8TAD7 63 aa11.25□□□□□ -0.61
CBWD1-225ENST00000616944 GPR61Q9BZJ8 451 aa11.25□□□□□ -0.61
CBWD1-225ENST00000616944 ZNF492Q9P255 531 aa11.25□□□□□ -0.61
CBWD1-225ENST00000616944 A8MTW9 85 aa11.24□□□□□ -0.61
CBWD1-225ENST00000616944 K7EN84 100 aa11.24□□□□□ -0.61
CBWD1-225ENST00000616944 HIST1H1AQ02539 215 aaPredicted RBP11.24□□□□□ -0.61
CBWD1-225ENST00000616944 PNRC1Q12796 327 aaPredicted RBP11.24□□□□□ -0.61
CBWD1-225ENST00000616944 ZNF124Q15973 351 aa11.24□□□□□ -0.61
CBWD1-225ENST00000616944 TMEM78Q5T7P6 136 aa11.24□□□□□ -0.61
CBWD1-225ENST00000616944 COX8CQ7Z4L0 72 aa11.24□□□□□ -0.61
CBWD1-225ENST00000616944 BAGE2Q86Y30 109 aa11.24□□□□□ -0.61
CBWD1-225ENST00000616944 TMEM183AQ8IXX5 376 aa11.24□□□□□ -0.61
CBWD1-225ENST00000616944 FAM19A4Q96LR4 140 aa11.24□□□□□ -0.61
CBWD1-225ENST00000616944 LINC00477Q96M19 166 aa11.24□□□□□ -0.61
CBWD1-225ENST00000616944 PRR25Q96S07 402 aa11.24□□□□□ -0.61
CBWD1-225ENST00000616944 ASCL2Q99929 193 aa11.24□□□□□ -0.61
CBWD1-225ENST00000616944 ZFP30Q9Y2G7 519 aa11.24□□□□□ -0.61
CBWD1-225ENST00000616944 OR11H12B2RN74 326 aa11.24□□□□□ -0.61
CBWD1-225ENST00000616944 HLA-DRB4P13762 266 aa11.24□□□□□ -0.61
CBWD1-225ENST00000616944 ZNF138P52744 262 aa11.24□□□□□ -0.61
CBWD1-225ENST00000616944 APRG1Q8IVJ8 170 aa11.24□□□□□ -0.61
CBWD1-225ENST00000616944 NHLRC2Q8NBF2 726 aa11.24□□□□□ -0.61
CBWD1-225ENST00000616944 LENEPQ9Y5L5 61 aa11.24□□□□□ -0.61
CBWD1-225ENST00000616944 HLA-DRB4X5D2U9 266 aa11.24□□□□□ -0.61
CBWD1-225ENST00000616944 CT45A10P0DMU9 189 aa11.23□□□□□ -0.61
CBWD1-225ENST00000616944 CMC4P56277 68 aaPredicted RBP11.23□□□□□ -0.61
CBWD1-225ENST00000616944 OXLD1Q5BKU9 147 aa11.23□□□□□ -0.61
CBWD1-225ENST00000616944 EBLN2Q6P2I7 272 aa11.23□□□□□ -0.61
CBWD1-225ENST00000616944 SVBPQ8N300 66 aa11.23□□□□□ -0.61
CBWD1-225ENST00000616944 AURKAIP1Q9NWT8 199 aaPredicted RBP11.23□□□□□ -0.61
CBWD1-225ENST00000616944 TRBV7-9A0A0J9YWB2 115 aa11.22□□□□□ -0.61
CBWD1-225ENST00000616944 KNCNA6PVL3 124 aa11.22□□□□□ -0.61
CBWD1-225ENST00000616944 H3BMM0 161 aa11.22□□□□□ -0.61
CBWD1-225ENST00000616944 EGFEM1PQ0D2K5 195 aa11.22□□□□□ -0.61
CBWD1-225ENST00000616944 SAPCD1Q5SSQ6 148 aa11.22□□□□□ -0.61
CBWD1-225ENST00000616944 AMTNQ6UX39 209 aa11.22□□□□□ -0.61
CBWD1-225ENST00000616944 C8orf49Q96NF6 230 aa11.22□□□□□ -0.61
CBWD1-225ENST00000616944 ODF3Q96PU9 254 aa11.22□□□□□ -0.61
CBWD1-225ENST00000616944 GCGP01275 180 aa11.21□□□□□ -0.61
CBWD1-225ENST00000616944 ADIRFQ15847 76 aa11.21□□□□□ -0.61
CBWD1-225ENST00000616944 ACTL10Q5JWF8 245 aa11.21□□□□□ -0.61
CBWD1-225ENST00000616944 ISOC2Q96AB3 205 aa11.21□□□□□ -0.61
CBWD1-225ENST00000616944 ZC2HC1AQ96GY0 325 aa11.21□□□□□ -0.61
CBWD1-225ENST00000616944 WFDC10AQ9H1F0 79 aa11.21□□□□□ -0.61
CBWD1-225ENST00000616944 DNAH3Q8TD57 4116 aa11.21□□□□□ -0.62
CBWD1-225ENST00000616944 DUSP14O95147 198 aaKnown RBP11.2□□□□□ -0.62
CBWD1-225ENST00000616944 CRISP2P16562 243 aa11.2□□□□□ -0.62
CBWD1-225ENST00000616944 ZFAND2AQ8N6M9 145 aa11.2□□□□□ -0.62
CBWD1-225ENST00000616944 CLRN3Q8NCR9 226 aa11.2□□□□□ -0.62
CBWD1-225ENST00000616944 CLUHP3Q96NS8 147 aa11.2□□□□□ -0.62
CBWD1-225ENST00000616944 OR5I1Q13606 314 aa11.2□□□□□ -0.62
CBWD1-225ENST00000616944 LINC00322Q6ZN03 302 aaPredicted RBP11.2□□□□□ -0.62
CBWD1-225ENST00000616944 NDFIP1Q9BT67 221 aa11.2□□□□□ -0.62
CBWD1-225ENST00000616944 RBMY1BA6NDE4 496 aaKnown RBP11.19□□□□□ -0.62
CBWD1-225ENST00000616944 RBMY1EA6NEQ0 496 aaKnown RBP11.19□□□□□ -0.62
CBWD1-225ENST00000616944 SNAPINO95295 136 aa11.19□□□□□ -0.62
CBWD1-225ENST00000616944 RBMY1DP0C7P1 496 aaKnown RBP11.19□□□□□ -0.62
CBWD1-225ENST00000616944 MGST1P10620 155 aaKnown RBP11.19□□□□□ -0.62
CBWD1-225ENST00000616944 CRIP1P50238 77 aa11.19□□□□□ -0.62
CBWD1-225ENST00000616944 PRR9Q5T870 116 aa11.19□□□□□ -0.62
CBWD1-225ENST00000616944 ATRAIDQ6UW56 229 aa11.19□□□□□ -0.62
CBWD1-225ENST00000616944 GTSCR1Q86UQ5 136 aa11.19□□□□□ -0.62
CBWD1-225ENST00000616944 Q8N1Y9 231 aa11.19□□□□□ -0.62
CBWD1-225ENST00000616944 OR4B1Q8NGF8 309 aa11.19□□□□□ -0.62
CBWD1-225ENST00000616944 KLLNB2CW77 178 aa11.18□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms