RNA–Protein interactions for RNA: ENST00000616545.4

TARDBP-217, Transcript of TAR DNA binding protein, humanhuman

TSL 5 BASIC

Gene TARDBP, Length 920 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TARDBP-217ENST00000616545 ZNF727A8MUV8 499 aa8.64□□□□□ -1.03
TARDBP-217ENST00000616545 KRBOX1C9JBD0 128 aa8.64□□□□□ -1.03
TARDBP-217ENST00000616545 C9JQL5 133 aa8.64□□□□□ -1.03
TARDBP-217ENST00000616545 PRAC2D3DTV9 90 aa8.64□□□□□ -1.03
TARDBP-217ENST00000616545 H3BMM0 161 aa8.64□□□□□ -1.03
TARDBP-217ENST00000616545 IGKV2D-40P01614 121 aaPredicted RBP8.64□□□□□ -1.03
TARDBP-217ENST00000616545 IGLV2-11P01706 119 aa8.64□□□□□ -1.03
TARDBP-217ENST00000616545 AMBPP02760 352 aa8.64□□□□□ -1.03
TARDBP-217ENST00000616545 SFTA3P0C7M3 94 aa8.64□□□□□ -1.03
TARDBP-217ENST00000616545 ACTL10Q5JWF8 245 aa8.64□□□□□ -1.03
TARDBP-217ENST00000616545 KPRPQ5T749 579 aaPredicted RBP8.64□□□□□ -1.03
TARDBP-217ENST00000616545 COX8CQ7Z4L0 72 aa8.64□□□□□ -1.03
TARDBP-217ENST00000616545 STHQ8IWL8 128 aa8.64□□□□□ -1.03
TARDBP-217ENST00000616545 SMIM7Q9BQ49 75 aa8.64□□□□□ -1.03
TARDBP-217ENST00000616545 AGPAT4-IT1Q9H0P7 198 aa8.64□□□□□ -1.03
TARDBP-217ENST00000616545 LTAP01374 205 aa8.63□□□□□ -1.03
TARDBP-217ENST00000616545 CRISP2P16562 243 aa8.63□□□□□ -1.03
TARDBP-217ENST00000616545 LEPP41159 167 aa8.63□□□□□ -1.03
TARDBP-217ENST00000616545 GNG4P50150 75 aa8.63□□□□□ -1.03
TARDBP-217ENST00000616545 MORN3Q6PF18 240 aaPredicted RBP8.63□□□□□ -1.03
TARDBP-217ENST00000616545 BAGE2Q86Y30 109 aa8.63□□□□□ -1.03
TARDBP-217ENST00000616545 TMEM183AQ8IXX5 376 aa8.63□□□□□ -1.03
TARDBP-217ENST00000616545 VGLL1Q99990 258 aa8.63□□□□□ -1.03
TARDBP-217ENST00000616545 SEC11CQ9BY50 192 aa8.63□□□□□ -1.03
TARDBP-217ENST00000616545 TRAV34A0A0B4J273 112 aa8.62□□□□□ -1.03
TARDBP-217ENST00000616545 A8MZ25 164 aa8.62□□□□□ -1.03
TARDBP-217ENST00000616545 F6UB75 175 aa8.62□□□□□ -1.03
TARDBP-217ENST00000616545 G3V4G9 280 aa8.62□□□□□ -1.03
TARDBP-217ENST00000616545 CEBPGP53567 150 aa8.62□□□□□ -1.03
TARDBP-217ENST00000616545 PNRC1Q12796 327 aaPredicted RBP8.62□□□□□ -1.03
TARDBP-217ENST00000616545 TMEM241Q24JQ0 296 aa8.62□□□□□ -1.03
TARDBP-217ENST00000616545 ZNF674Q2M3X9 581 aa8.62□□□□□ -1.03
TARDBP-217ENST00000616545 PRNTQ86SH4 94 aa8.62□□□□□ -1.03
TARDBP-217ENST00000616545 Q86TA4 180 aa8.62□□□□□ -1.03
TARDBP-217ENST00000616545 TRPT1Q86TN4 253 aaKnown RBP8.62□□□□□ -1.03
TARDBP-217ENST00000616545 APRG1Q8IVJ8 170 aa8.62□□□□□ -1.03
TARDBP-217ENST00000616545 Q8N1Y9 231 aa8.62□□□□□ -1.03
TARDBP-217ENST00000616545 OR4B1Q8NGF8 309 aa8.62□□□□□ -1.03
TARDBP-217ENST00000616545 FAM19A4Q96LR4 140 aa8.62□□□□□ -1.03
TARDBP-217ENST00000616545 IGF2BP2-AS1Q96M15 143 aa8.62□□□□□ -1.03
TARDBP-217ENST00000616545 LINC00479Q96M42 142 aa8.62□□□□□ -1.03
TARDBP-217ENST00000616545 CITED4Q96RK1 184 aa8.62□□□□□ -1.03
TARDBP-217ENST00000616545 PRR25Q96S07 402 aa8.62□□□□□ -1.03
TARDBP-217ENST00000616545 NIPSNAP3BQ9BS92 247 aa8.62□□□□□ -1.03
TARDBP-217ENST00000616545 NAT8Q9UHE5 227 aa8.62□□□□□ -1.03
TARDBP-217ENST00000616545 TRAV8-1A0A0A6YYK1 113 aa8.61□□□□□ -1.03
TARDBP-217ENST00000616545 KNCNA6PVL3 124 aa8.61□□□□□ -1.03
TARDBP-217ENST00000616545 F8W036 122 aa8.61□□□□□ -1.03
TARDBP-217ENST00000616545 CT45A10P0DMU9 189 aa8.61□□□□□ -1.03
TARDBP-217ENST00000616545 KRTAP10-11P60412 298 aa8.61□□□□□ -1.03
TARDBP-217ENST00000616545 ERCC8Q13216 396 aa8.61□□□□□ -1.03
TARDBP-217ENST00000616545 CENPWQ5EE01 88 aa8.61□□□□□ -1.03
TARDBP-217ENST00000616545 C10orf91Q5T1B1 145 aa8.61□□□□□ -1.03
TARDBP-217ENST00000616545 GDF5OSQ5U4N7 250 aa8.61□□□□□ -1.03
TARDBP-217ENST00000616545 DERL1Q9BUN8 251 aa8.61□□□□□ -1.03
TARDBP-217ENST00000616545 MLST8Q9BVC4 326 aa8.61□□□□□ -1.03
TARDBP-217ENST00000616545 C1QTNF4Q9BXJ3 329 aa8.61□□□□□ -1.03
TARDBP-217ENST00000616545 KIR2DL5BA0A0G2JN68 375 aa8.6□□□□□ -1.03
TARDBP-217ENST00000616545 KIR2DL5BA0A0G2JPC4 375 aa8.6□□□□□ -1.03
TARDBP-217ENST00000616545 ZNF705DP0CH99 300 aaPredicted RBP8.6□□□□□ -1.03
TARDBP-217ENST00000616545 ZNF705BP0CI00 300 aaPredicted RBP8.6□□□□□ -1.03
TARDBP-217ENST00000616545 CDKN1BP46527 198 aa8.6□□□□□ -1.03
TARDBP-217ENST00000616545 SMUG1Q53HV7 270 aa8.6□□□□□ -1.03
TARDBP-217ENST00000616545 AMTNQ6UX39 209 aa8.6□□□□□ -1.03
TARDBP-217ENST00000616545 SLC7A5P1Q8MH63 180 aa8.6□□□□□ -1.03
TARDBP-217ENST00000616545 KIR2DL5AQ8N109 375 aa8.6□□□□□ -1.03
TARDBP-217ENST00000616545 KIR2DL5BQ8NHK3 375 aa8.6□□□□□ -1.03
TARDBP-217ENST00000616545 ASCL2Q99929 193 aa8.6□□□□□ -1.03
TARDBP-217ENST00000616545 C20orf144Q9BQM9 153 aa8.6□□□□□ -1.03
TARDBP-217ENST00000616545 TUBA4BQ9H853 241 aa8.6□□□□□ -1.03
TARDBP-217ENST00000616545 CARHSP1Q9Y2V2 147 aaKnown RBP8.6□□□□□ -1.03
TARDBP-217ENST00000616545 TRBV20OR9-2A0A075B6H5 130 aa8.59□□□□□ -1.03
TARDBP-217ENST00000616545 LOC102724200A0A096LPH7 203 aaPredicted RBP8.59□□□□□ -1.03
TARDBP-217ENST00000616545 KLLNB2CW77 178 aa8.59□□□□□ -1.03
TARDBP-217ENST00000616545 DEFB1P60022 68 aa8.59□□□□□ -1.03
TARDBP-217ENST00000616545 DEFB125Q8N687 156 aa8.59□□□□□ -1.03
TARDBP-217ENST00000616545 TVP23CQ96ET8 276 aa8.59□□□□□ -1.03
TARDBP-217ENST00000616545 SGK494Q96LW2 274 aa8.59□□□□□ -1.03
TARDBP-217ENST00000616545 SRD5A3Q9H8P0 318 aa8.59□□□□□ -1.03
TARDBP-217ENST00000616545 SDF2L1Q9HCN8 221 aa8.59□□□□□ -1.03
TARDBP-217ENST00000616545 FABP5P3A8MUU1 101 aa8.58□□□□□ -1.04
TARDBP-217ENST00000616545 UBE2CO00762 179 aa8.58□□□□□ -1.04
TARDBP-217ENST00000616545 GCGP01275 180 aa8.58□□□□□ -1.04
TARDBP-217ENST00000616545 GPX1P07203 203 aa8.58□□□□□ -1.04
TARDBP-217ENST00000616545 APOC4P55056 127 aa8.58□□□□□ -1.04
TARDBP-217ENST00000616545 ZNF124Q15973 351 aa8.58□□□□□ -1.04
TARDBP-217ENST00000616545 LINC01551Q86U37 167 aa8.58□□□□□ -1.04
TARDBP-217ENST00000616545 ZFAND2AQ8N6M9 145 aa8.58□□□□□ -1.04
TARDBP-217ENST00000616545 OCC1Q8TAD7 63 aa8.58□□□□□ -1.04
TARDBP-217ENST00000616545 Q8TAT8 98 aa8.58□□□□□ -1.04
TARDBP-217ENST00000616545 VWFP04275 2813 aa8.58□□□□□ -1.04
TARDBP-217ENST00000616545 TRAV21A0A0B4J279 112 aa8.57□□□□□ -1.04
TARDBP-217ENST00000616545 B4DEV8 164 aa8.57□□□□□ -1.04
TARDBP-217ENST00000616545 IGKV3-20P01619 116 aa8.57□□□□□ -1.04
TARDBP-217ENST00000616545 IGLV2-8P01709 118 aa8.57□□□□□ -1.04
TARDBP-217ENST00000616545 PFN1P07737 140 aaKnown RBP8.57□□□□□ -1.04
TARDBP-217ENST00000616545 IGHV4-30-4P0DP06 118 aa8.57□□□□□ -1.04
TARDBP-217ENST00000616545 FAM162BQ5T6X4 162 aa8.57□□□□□ -1.04
TARDBP-217ENST00000616545 Q6AWC8 147 aa8.57□□□□□ -1.04
TARDBP-217ENST00000616545 CSTL1Q9H114 145 aa8.57□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 157 ms