RNA–Protein interactions for RNA: ENST00000615732.1

COL4A1-205, Transcript of collagen type IV alpha 1 chain, humanhuman

TSL 5

Gene COL4A1, Length 1,077 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A1-205ENST00000615732 ZFP82Q8N141 532 aa8.15□□□□□ -1.1
COL4A1-205ENST00000615732 TMEM75Q8N9X5 138 aa8.15□□□□□ -1.1
COL4A1-205ENST00000615732 SGK494Q96LW2 274 aa8.15□□□□□ -1.1
COL4A1-205ENST00000615732 SLC50A1Q9BRV3 221 aa8.15□□□□□ -1.1
COL4A1-205ENST00000615732 IL36BQ9NZH7 164 aa8.15□□□□□ -1.1
COL4A1-205ENST00000615732 ZMAT5Q9UDW3 170 aaKnown RBP8.15□□□□□ -1.1
COL4A1-205ENST00000615732 KLF12Q9Y4X4 402 aa8.15□□□□□ -1.1
COL4A1-205ENST00000615732 TENM2Q9NT68 2774 aa8.14□□□□□ -1.11
COL4A1-205ENST00000615732 IGHV3OR16-13A0A075B7E8 117 aa8.14□□□□□ -1.11
COL4A1-205ENST00000615732 IGHV3-74A0A0B4J1X5 117 aa8.14□□□□□ -1.11
COL4A1-205ENST00000615732 TRBV6-1A0A0K0K1D8 114 aa8.14□□□□□ -1.11
COL4A1-205ENST00000615732 ZNF705GA8MUZ8 300 aaPredicted RBP8.14□□□□□ -1.11
COL4A1-205ENST00000615732 DIRC3C9JPN6 131 aa8.14□□□□□ -1.11
COL4A1-205ENST00000615732 GATCO43716 136 aaKnown RBP8.14□□□□□ -1.11
COL4A1-205ENST00000615732 IGLV2-8P01709 118 aa8.14□□□□□ -1.11
COL4A1-205ENST00000615732 BMI1P35226 326 aa8.14□□□□□ -1.11
COL4A1-205ENST00000615732 RPL19P84098 196 aaKnown RBP8.14□□□□□ -1.11
COL4A1-205ENST00000615732 PRR27Q6MZM9 219 aa8.14□□□□□ -1.11
COL4A1-205ENST00000615732 PRNTQ86SH4 94 aa8.14□□□□□ -1.11
COL4A1-205ENST00000615732 C4orf3Q8WVX3 66 aa8.14□□□□□ -1.11
COL4A1-205ENST00000615732 U3KQE9 123 aa8.14□□□□□ -1.11
COL4A1-205ENST00000615732 TRAV9-1A0A075B6T8 112 aa8.13□□□□□ -1.11
COL4A1-205ENST00000615732 LTAP01374 205 aa8.13□□□□□ -1.11
COL4A1-205ENST00000615732 APOHP02749 345 aaPredicted RBP8.13□□□□□ -1.11
COL4A1-205ENST00000615732 LGALS1P09382 135 aaKnown RBP8.13□□□□□ -1.11
COL4A1-205ENST00000615732 CDX1P47902 265 aaPredicted RBP8.13□□□□□ -1.11
COL4A1-205ENST00000615732 FHL3Q13643 280 aa8.13□□□□□ -1.11
COL4A1-205ENST00000615732 PSG3Q16557 428 aa8.13□□□□□ -1.11
COL4A1-205ENST00000615732 C16orf54Q6UWD8 224 aa8.13□□□□□ -1.11
COL4A1-205ENST00000615732 UNQ9165/PRO28630Q6UXU0 137 aa8.13□□□□□ -1.11
COL4A1-205ENST00000615732 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa8.13□□□□□ -1.11
COL4A1-205ENST00000615732 FAM231DQ6ZW35 169 aa8.13□□□□□ -1.11
COL4A1-205ENST00000615732 GBGT1Q8N5D6 347 aa8.13□□□□□ -1.11
COL4A1-205ENST00000615732 ARL6IP6Q8N6S5 226 aa8.13□□□□□ -1.11
COL4A1-205ENST00000615732 RNF152Q8N8N0 203 aa8.13□□□□□ -1.11
COL4A1-205ENST00000615732 OR11H1Q8NG94 326 aa8.13□□□□□ -1.11
COL4A1-205ENST00000615732 DAZAP1Q96EP5 407 aaKnown RBP8.13□□□□□ -1.11
COL4A1-205ENST00000615732 RNASE7Q9H1E1 156 aaKnown RBP8.13□□□□□ -1.11
COL4A1-205ENST00000615732 PSG8Q9UQ74 426 aa8.13□□□□□ -1.11
COL4A1-205ENST00000615732 UFC1Q9Y3C8 167 aa8.13□□□□□ -1.11
COL4A1-205ENST00000615732 SMAD5-AS1Q9Y6J3 95 aa8.13□□□□□ -1.11
COL4A1-205ENST00000615732 LOC105371267A0A1B0GV96 52 aa8.12□□□□□ -1.11
COL4A1-205ENST00000615732 FBLL1A6NHQ2 334 aaKnown RBP8.12□□□□□ -1.11
COL4A1-205ENST00000615732 M0R3E3 92 aa8.12□□□□□ -1.11
COL4A1-205ENST00000615732 CHEK1O14757 476 aa8.12□□□□□ -1.11
COL4A1-205ENST00000615732 S100A6P06703 90 aa8.12□□□□□ -1.11
COL4A1-205ENST00000615732 FAM3BP58499 235 aaPredicted RBP8.12□□□□□ -1.11
COL4A1-205ENST00000615732 CASC10Q5T4H9 136 aa8.12□□□□□ -1.11
COL4A1-205ENST00000615732 TMEM183AQ8IXX5 376 aa8.12□□□□□ -1.11
COL4A1-205ENST00000615732 GLMPQ8WWB7 406 aa8.12□□□□□ -1.11
COL4A1-205ENST00000615732 PYGO2Q9BRQ0 406 aa8.12□□□□□ -1.11
COL4A1-205ENST00000615732 SRD5A3Q9H8P0 318 aa8.12□□□□□ -1.11
COL4A1-205ENST00000615732 ZNF331Q9NQX6 463 aaPredicted RBP8.12□□□□□ -1.11
COL4A1-205ENST00000615732 DAZ1Q9NQZ3 744 aaKnown RBP8.12□□□□□ -1.11
COL4A1-205ENST00000615732 ZNF492Q9P255 531 aa8.12□□□□□ -1.11
COL4A1-205ENST00000615732 ZFP30Q9Y2G7 519 aa8.12□□□□□ -1.11
COL4A1-205ENST00000615732 ZNF256Q9Y2P7 627 aaPredicted RBP8.12□□□□□ -1.11
COL4A1-205ENST00000615732 V9GYV3 84 aa8.12□□□□□ -1.11
COL4A1-205ENST00000615732 TRAV8-1A0A0A6YYK1 113 aa8.11□□□□□ -1.11
COL4A1-205ENST00000615732 IGHV7-4-1A0A0J9YVY3 117 aa8.11□□□□□ -1.11
COL4A1-205ENST00000615732 CT45A10P0DMU9 189 aa8.11□□□□□ -1.11
COL4A1-205ENST00000615732 GPHB5Q86YW7 130 aa8.11□□□□□ -1.11
COL4A1-205ENST00000615732 MUC7Q8TAX7 377 aa8.11□□□□□ -1.11
COL4A1-205ENST00000615732 MRPL53Q96EL3 112 aaKnown RBP8.11□□□□□ -1.11
COL4A1-205ENST00000615732 C16orf92Q96LL3 132 aa8.11□□□□□ -1.11
COL4A1-205ENST00000615732 UBE2E2Q96LR5 201 aa8.11□□□□□ -1.11
COL4A1-205ENST00000615732 NDFIP1Q9BT67 221 aa8.11□□□□□ -1.11
COL4A1-205ENST00000615732 CLEC5AQ9NY25 188 aa8.11□□□□□ -1.11
COL4A1-205ENST00000615732 CSMD3Q7Z407 3707 aa8.11□□□□□ -1.11
COL4A1-205ENST00000615732 IGKV2-40A0A087WW87 121 aaPredicted RBP8.1□□□□□ -1.11
COL4A1-205ENST00000615732 K7EMT4 169 aa8.1□□□□□ -1.11
COL4A1-205ENST00000615732 IGKV2D-40P01614 121 aaPredicted RBP8.1□□□□□ -1.11
COL4A1-205ENST00000615732 P01737 135 aa8.1□□□□□ -1.11
COL4A1-205ENST00000615732 TRGC2P03986 189 aa8.1□□□□□ -1.11
COL4A1-205ENST00000615732 TYMSP04818 313 aa8.1□□□□□ -1.11
COL4A1-205ENST00000615732 HLA-DMBP28068 263 aa8.1□□□□□ -1.11
COL4A1-205ENST00000615732 TCL1AP56279 114 aa8.1□□□□□ -1.11
COL4A1-205ENST00000615732 RPL11P62913 178 aaKnown RBP8.1□□□□□ -1.11
COL4A1-205ENST00000615732 LCN12Q6JVE5 192 aa8.1□□□□□ -1.11
COL4A1-205ENST00000615732 NUDT10Q8NFP7 164 aa8.1□□□□□ -1.11
COL4A1-205ENST00000615732 MYOZ3Q8TDC0 251 aa8.1□□□□□ -1.11
COL4A1-205ENST00000615732 NUDT11Q96G61 164 aa8.1□□□□□ -1.11
COL4A1-205ENST00000615732 RPP21Q9H633 154 aaKnown RBP8.1□□□□□ -1.11
COL4A1-205ENST00000615732 SAP30O75446 220 aa8.09□□□□□ -1.11
COL4A1-205ENST00000615732 IGLV2-11P01706 119 aa8.09□□□□□ -1.11
COL4A1-205ENST00000615732 SLURP1P55000 103 aa8.09□□□□□ -1.11
COL4A1-205ENST00000615732 TM4SF20Q53R12 229 aa8.09□□□□□ -1.11
COL4A1-205ENST00000615732 IGFL4Q6B9Z1 124 aa8.09□□□□□ -1.11
COL4A1-205ENST00000615732 OR4B1Q8NGF8 309 aa8.09□□□□□ -1.11
COL4A1-205ENST00000615732 OR1N2Q8NGR9 330 aa8.09□□□□□ -1.11
COL4A1-205ENST00000615732 RCHY1Q96PM5 261 aa8.09□□□□□ -1.11
COL4A1-205ENST00000615732 MLST8Q9BVC4 326 aa8.09□□□□□ -1.11
COL4A1-205ENST00000615732 RHPN1-AS1Q9BWJ2 59 aa8.09□□□□□ -1.11
COL4A1-205ENST00000615732 SAV1Q9H4B6 383 aaPredicted RBP8.09□□□□□ -1.11
COL4A1-205ENST00000615732 SMPXQ9UHP9 88 aa8.09□□□□□ -1.11
COL4A1-205ENST00000615732 IGHV4OR15-8A0A075B7B6 117 aa8.08□□□□□ -1.12
COL4A1-205ENST00000615732 A0A087WW49 117 aa8.08□□□□□ -1.12
COL4A1-205ENST00000615732 SMIM27A0A1W2PRY6 76 aa8.08□□□□□ -1.12
COL4A1-205ENST00000615732 IZUMO1RA6ND01 250 aa8.08□□□□□ -1.12
COL4A1-205ENST00000615732 ZNF705FA8MVS1 300 aaPredicted RBP8.08□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 40.1 ms