RNA–Protein interactions for RNA: ENST00000615468.4

TNFAIP3-208, Transcript of TNF alpha induced protein 3, humanhuman

TSL 5 BASIC

Gene TNFAIP3, Length 3,818 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFAIP3-208ENST00000615468 FBXL15Q9H469 300 aa8.21□□□□□ -1.1
TNFAIP3-208ENST00000615468 TMEM262E9PQX1 116 aa8.21□□□□□ -1.1
TNFAIP3-208ENST00000615468 H7C2G1 150 aa8.21□□□□□ -1.1
TNFAIP3-208ENST00000615468 ATP5LO75964 103 aa8.21□□□□□ -1.1
TNFAIP3-208ENST00000615468 GATA1P15976 413 aaPredicted RBP8.21□□□□□ -1.1
TNFAIP3-208ENST00000615468 LYRM7Q5U5X0 104 aa8.21□□□□□ -1.1
TNFAIP3-208ENST00000615468 DUX4L9Q6RFH8 374 aaPredicted RBP8.21□□□□□ -1.1
TNFAIP3-208ENST00000615468 TEN1Q86WV5 123 aa8.21□□□□□ -1.1
TNFAIP3-208ENST00000615468 OR10X1Q8NGY0 326 aa8.21□□□□□ -1.1
TNFAIP3-208ENST00000615468 LINC01548A6NM66 108 aa8.2□□□□□ -1.1
TNFAIP3-208ENST00000615468 HLA-DRB4P13762 266 aa8.2□□□□□ -1.1
TNFAIP3-208ENST00000615468 ZCCHC24Q8N2G6 241 aaKnown RBP8.2□□□□□ -1.1
TNFAIP3-208ENST00000615468 C8orf46Q8TAG6 207 aa8.2□□□□□ -1.1
TNFAIP3-208ENST00000615468 VKORC1Q9BQB6 163 aa8.2□□□□□ -1.1
TNFAIP3-208ENST00000615468 MSRB1Q9NZV6 116 aa8.2□□□□□ -1.1
TNFAIP3-208ENST00000615468 HLA-DRB4X5D2U9 266 aa8.2□□□□□ -1.1
TNFAIP3-208ENST00000615468 DCHS1Q96JQ0 3298 aa8.2□□□□□ -1.1
TNFAIP3-208ENST00000615468 CACNA1BQ00975 2339 aa8.2□□□□□ -1.1
TNFAIP3-208ENST00000615468 SMCPP49901 116 aaPredicted RBP8.2□□□□□ -1.1
TNFAIP3-208ENST00000615468 SRSF1Q07955 248 aaKnown RBP eCLIP8.2□□□□□ -1.1
TNFAIP3-208ENST00000615468 POU2AF1Q16633 256 aa8.2□□□□□ -1.1
TNFAIP3-208ENST00000615468 C17orf58Q2M2W7 97 aa8.2□□□□□ -1.1
TNFAIP3-208ENST00000615468 CCL13Q99616 98 aa8.2□□□□□ -1.1
TNFAIP3-208ENST00000615468 AAMDCQ9H7C9 122 aa8.2□□□□□ -1.1
TNFAIP3-208ENST00000615468 TAL2Q16559 108 aa8.2□□□□□ -1.1
TNFAIP3-208ENST00000615468 ZNF71Q9NQZ8 489 aaPredicted RBP8.2□□□□□ -1.1
TNFAIP3-208ENST00000615468 VSTM5A8MXK1 200 aa8.19□□□□□ -1.1
TNFAIP3-208ENST00000615468 MZT1Q08AG7 82 aa8.19□□□□□ -1.1
TNFAIP3-208ENST00000615468 ATP6V0E2Q8NHE4 81 aa8.19□□□□□ -1.1
TNFAIP3-208ENST00000615468 FAM110AQ9BQ89 295 aa8.19□□□□□ -1.1
TNFAIP3-208ENST00000615468 SPRY4Q9C004 299 aa8.19□□□□□ -1.1
TNFAIP3-208ENST00000615468 DMXL2Q8TDJ6 3036 aa8.19□□□□□ -1.1
TNFAIP3-208ENST00000615468 GAS8-AS1O95177 125 aa8.19□□□□□ -1.1
TNFAIP3-208ENST00000615468 RUSC1-AS1Q66K80 236 aa8.19□□□□□ -1.1
TNFAIP3-208ENST00000615468 SLC25A39Q9BZJ4 359 aaPredicted RBP8.19□□□□□ -1.1
TNFAIP3-208ENST00000615468 VCX2Q9H322 139 aa8.19□□□□□ -1.1
TNFAIP3-208ENST00000615468 SPRR3Q9UBC9 169 aa8.19□□□□□ -1.1
TNFAIP3-208ENST00000615468 SH2D1AO60880 128 aa8.19□□□□□ -1.1
TNFAIP3-208ENST00000615468 TNFRSF6BO95407 300 aa8.19□□□□□ -1.1
TNFAIP3-208ENST00000615468 IFITM1P13164 125 aa8.19□□□□□ -1.1
TNFAIP3-208ENST00000615468 CRIP1P50238 77 aa8.19□□□□□ -1.1
TNFAIP3-208ENST00000615468 NDUFV3P56181 108 aaKnown RBP8.19□□□□□ -1.1
TNFAIP3-208ENST00000615468 C3orf36Q3SXR2 165 aa8.19□□□□□ -1.1
TNFAIP3-208ENST00000615468 RASL11BQ9BPW5 248 aa8.19□□□□□ -1.1
TNFAIP3-208ENST00000615468 TMEM133Q9H2Q1 129 aa8.19□□□□□ -1.1
TNFAIP3-208ENST00000615468 AKAP6Q13023 2319 aa8.18□□□□□ -1.1
TNFAIP3-208ENST00000615468 FSTL3O95633 263 aa8.18□□□□□ -1.1
TNFAIP3-208ENST00000615468 IGLV2-11P01706 119 aa8.18□□□□□ -1.1
TNFAIP3-208ENST00000615468 SCNM1Q9BWG6 230 aa8.18□□□□□ -1.1
TNFAIP3-208ENST00000615468 NXT2Q9NPJ8 142 aaKnown RBP8.18□□□□□ -1.1
TNFAIP3-208ENST00000615468 RAXQ9Y2V3 346 aa8.18□□□□□ -1.1
TNFAIP3-208ENST00000615468 SRRM5B3KS81 715 aa8.18□□□□□ -1.1
TNFAIP3-208ENST00000615468 FAM159AQ6UWV7 190 aa8.18□□□□□ -1.1
TNFAIP3-208ENST00000615468 CARD19Q96LW7 228 aa8.18□□□□□ -1.1
TNFAIP3-208ENST00000615468 PROCRQ9UNN8 238 aa8.18□□□□□ -1.1
TNFAIP3-208ENST00000615468 FABP5P3A8MUU1 101 aa8.18□□□□□ -1.1
TNFAIP3-208ENST00000615468 IGHV1-2P23083 117 aa8.18□□□□□ -1.1
TNFAIP3-208ENST00000615468 EFNA4P52798 201 aa8.18□□□□□ -1.1
TNFAIP3-208ENST00000615468 VMA21Q3ZAQ7 101 aa8.18□□□□□ -1.1
TNFAIP3-208ENST00000615468 MORN3Q6PF18 240 aaPredicted RBP8.18□□□□□ -1.1
TNFAIP3-208ENST00000615468 ZNF493Q6ZR52 646 aa8.18□□□□□ -1.1
TNFAIP3-208ENST00000615468 ANKRD29Q8N6D5 301 aa8.18□□□□□ -1.1
TNFAIP3-208ENST00000615468 FAM216BQ8N7L0 139 aa8.18□□□□□ -1.1
TNFAIP3-208ENST00000615468 THAP8Q8NA92 274 aa8.18□□□□□ -1.1
TNFAIP3-208ENST00000615468 ONECUT1Q9UBC0 465 aa8.18□□□□□ -1.1
TNFAIP3-208ENST00000615468 A0A1W2PPI3 338 aa8.17□□□□□ -1.1
TNFAIP3-208ENST00000615468 ZNF815PA8K554 130 aa8.17□□□□□ -1.1
TNFAIP3-208ENST00000615468 PLGLAQ15195 96 aa8.17□□□□□ -1.1
TNFAIP3-208ENST00000615468 MEIG1Q5JSS6 88 aa8.17□□□□□ -1.1
TNFAIP3-208ENST00000615468 OR4C13Q8NGP0 309 aa8.17□□□□□ -1.1
TNFAIP3-208ENST00000615468 MYMXA0A1B0GTQ4 84 aa8.17□□□□□ -1.1
TNFAIP3-208ENST00000615468 TCF15Q12870 199 aa8.17□□□□□ -1.1
TNFAIP3-208ENST00000615468 PPP1R27Q86WC6 154 aa8.17□□□□□ -1.1
TNFAIP3-208ENST00000615468 Q8TAT8 98 aa8.17□□□□□ -1.1
TNFAIP3-208ENST00000615468 NGBQ9NPG2 151 aa8.17□□□□□ -1.1
TNFAIP3-208ENST00000615468 SPTBN1Q01082 2364 aaKnown RBP8.17□□□□□ -1.1
TNFAIP3-208ENST00000615468 ID1P41134 155 aa8.17□□□□□ -1.1
TNFAIP3-208ENST00000615468 PRSS33Q8NF86 280 aa8.17□□□□□ -1.1
TNFAIP3-208ENST00000615468 TRGV9Q99603 122 aa8.17□□□□□ -1.1
TNFAIP3-208ENST00000615468 TPSG1Q9NRR2 321 aa8.17□□□□□ -1.1
TNFAIP3-208ENST00000615468 TNRC6BQ9UPQ9 1833 aaKnown RBP8.16□□□□□ -1.1
TNFAIP3-208ENST00000615468 TRAV4A0A0B4J268 109 aa8.16□□□□□ -1.1
TNFAIP3-208ENST00000615468 SHISA9B4DS77 424 aa8.16□□□□□ -1.1
TNFAIP3-208ENST00000615468 C9JAW5 83 aa8.16□□□□□ -1.1
TNFAIP3-208ENST00000615468 TMEM78Q5T7P6 136 aa8.16□□□□□ -1.1
TNFAIP3-208ENST00000615468 TMEM75Q8N9X5 138 aa8.16□□□□□ -1.1
TNFAIP3-208ENST00000615468 S4R3C0 116 aa8.16□□□□□ -1.1
TNFAIP3-208ENST00000615468 IGKV2-40A0A087WW87 121 aaPredicted RBP8.16□□□□□ -1.1
TNFAIP3-208ENST00000615468 IGKV2D-40P01614 121 aaPredicted RBP8.16□□□□□ -1.1
TNFAIP3-208ENST00000615468 ZFHX4Q86UP3 3567 aa8.16□□□□□ -1.1
TNFAIP3-208ENST00000615468 ZNF785A8K8V0 405 aa8.16□□□□□ -1.1
TNFAIP3-208ENST00000615468 CRYGCP07315 174 aa8.16□□□□□ -1.1
TNFAIP3-208ENST00000615468 CECR9P0C854 216 aa8.16□□□□□ -1.1
TNFAIP3-208ENST00000615468 DIAPH2-AS1Q14236 149 aa8.16□□□□□ -1.1
TNFAIP3-208ENST00000615468 Q1RN00 199 aa8.16□□□□□ -1.1
TNFAIP3-208ENST00000615468 SPRNQ5BIV9 151 aa8.16□□□□□ -1.1
TNFAIP3-208ENST00000615468 YAE1D1Q9NRH1 226 aa8.16□□□□□ -1.1
TNFAIP3-208ENST00000615468 ABCA4P78363 2273 aa8.16□□□□□ -1.1
TNFAIP3-208ENST00000615468 RPL27AP46776 148 aaKnown RBP8.15□□□□□ -1.1
TNFAIP3-208ENST00000615468 TCL1BO95988 128 aa8.15□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 56.7 ms