RNA–Protein interactions for RNA: ENST00000612856.4

FAM3A-221, Transcript of family with sequence similarity 3 member A, humanhuman

TSL 2

Gene FAM3A, Length 3,995 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FAM3A-221ENST00000612856 K7EMI3 77 aa8.67□□□□□ -1.02
FAM3A-221ENST00000612856 ZFP36P26651 326 aaKnown RBP8.67□□□□□ -1.02
FAM3A-221ENST00000612856 C9JCJ5 164 aa8.67□□□□□ -1.02
FAM3A-221ENST00000612856 DSCR9P59020 149 aa8.67□□□□□ -1.02
FAM3A-221ENST00000612856 HSD52Q0P140 79 aa8.67□□□□□ -1.02
FAM3A-221ENST00000612856 C5orf64Q2M2E5 130 aa8.67□□□□□ -1.02
FAM3A-221ENST00000612856 DEFB136Q30KP8 78 aa8.67□□□□□ -1.02
FAM3A-221ENST00000612856 ETDBQ3ZM63 59 aa8.67□□□□□ -1.02
FAM3A-221ENST00000612856 H0YJW9 148 aa8.67□□□□□ -1.02
FAM3A-221ENST00000612856 HBBP68871 147 aa8.67□□□□□ -1.02
FAM3A-221ENST00000612856 UTF1Q5T230 341 aa8.67□□□□□ -1.02
FAM3A-221ENST00000612856 TRAV26-1A0A087WT03 109 aa8.66□□□□□ -1.02
FAM3A-221ENST00000612856 MGPP08493 103 aa8.66□□□□□ -1.02
FAM3A-221ENST00000612856 CFHR2P36980 270 aa8.66□□□□□ -1.02
FAM3A-221ENST00000612856 PSG3Q16557 428 aa8.66□□□□□ -1.02
FAM3A-221ENST00000612856 SAMD5Q5TGI4 173 aa8.66□□□□□ -1.02
FAM3A-221ENST00000612856 FAM74A4Q5TZK3 123 aa8.66□□□□□ -1.02
FAM3A-221ENST00000612856 Q6ZSR3 168 aa8.66□□□□□ -1.02
FAM3A-221ENST00000612856 SLC25A48Q6ZT89 311 aaKnown RBP8.66□□□□□ -1.02
FAM3A-221ENST00000612856 A0A1B0GWB2 263 aa8.66□□□□□ -1.02
FAM3A-221ENST00000612856 IGLC1P0CG04 106 aa8.66□□□□□ -1.02
FAM3A-221ENST00000612856 SMIM13P0DJ93 91 aa8.66□□□□□ -1.02
FAM3A-221ENST00000612856 C17orf58Q2M2W7 97 aa8.66□□□□□ -1.02
FAM3A-221ENST00000612856 SMR3AQ99954 134 aa8.66□□□□□ -1.02
FAM3A-221ENST00000612856 A8MWL6 223 aa8.66□□□□□ -1.02
FAM3A-221ENST00000612856 SYNJ2BPP57105 145 aa8.66□□□□□ -1.02
FAM3A-221ENST00000612856 BCL6BQ8N143 479 aaPredicted RBP8.66□□□□□ -1.02
FAM3A-221ENST00000612856 PIP4P2Q8N4L2 257 aa8.66□□□□□ -1.02
FAM3A-221ENST00000612856 Q8N976 141 aa8.66□□□□□ -1.02
FAM3A-221ENST00000612856 IGHV1-69DA0A0B4J2H0 117 aa8.65□□□□□ -1.02
FAM3A-221ENST00000612856 ATP6V0E1O15342 81 aa8.65□□□□□ -1.02
FAM3A-221ENST00000612856 IGHV1-69P01742 117 aa8.65□□□□□ -1.02
FAM3A-221ENST00000612856 ZNF688P0C7X2 276 aa8.65□□□□□ -1.02
FAM3A-221ENST00000612856 ERVK11-1P61568 191 aa8.65□□□□□ -1.02
FAM3A-221ENST00000612856 TMEM78Q5T7P6 136 aa8.65□□□□□ -1.02
FAM3A-221ENST00000612856 PET117Q6UWS5 81 aa8.65□□□□□ -1.02
FAM3A-221ENST00000612856 ADAMTSL5Q6ZMM2 481 aa8.65□□□□□ -1.02
FAM3A-221ENST00000612856 ATP6V0BQ99437 205 aa8.65□□□□□ -1.02
FAM3A-221ENST00000612856 C15orf61A6NNL5 157 aa8.65□□□□□ -1.02
FAM3A-221ENST00000612856 H3BVH4 76 aa8.65□□□□□ -1.02
FAM3A-221ENST00000612856 OVOL3O00110 214 aa8.65□□□□□ -1.02
FAM3A-221ENST00000612856 C5orf30Q96GV9 206 aa8.65□□□□□ -1.02
FAM3A-221ENST00000612856 MOB4Q9Y3A3 225 aa8.65□□□□□ -1.02
FAM3A-221ENST00000612856 SMG1Q96Q15 3661 aaKnown RBP8.65□□□□□ -1.02
FAM3A-221ENST00000612856 CACNG7P62955 275 aa8.65□□□□□ -1.03
FAM3A-221ENST00000612856 C8orf88P0DMB2 117 aa8.64□□□□□ -1.03
FAM3A-221ENST00000612856 DLX6P56179 175 aa8.64□□□□□ -1.03
FAM3A-221ENST00000612856 SEC11AP67812 179 aa8.64□□□□□ -1.03
FAM3A-221ENST00000612856 LOC107984156A0A0G2JMH3 177 aa8.64□□□□□ -1.03
FAM3A-221ENST00000612856 PPIFP30405 207 aaKnown RBP8.64□□□□□ -1.03
FAM3A-221ENST00000612856 ARL17AQ8IVW1 177 aa8.64□□□□□ -1.03
FAM3A-221ENST00000612856 MRPL27Q9P0M9 148 aaKnown RBP8.64□□□□□ -1.03
FAM3A-221ENST00000612856 TEX29Q8N6K0 151 aa8.64□□□□□ -1.03
FAM3A-221ENST00000612856 DDB2Q92466 427 aa8.64□□□□□ -1.03
FAM3A-221ENST00000612856 IGHV1-24A0A0C4DH33 117 aa8.63□□□□□ -1.03
FAM3A-221ENST00000612856 SRRM4A7MD48 611 aaKnown RBP8.63□□□□□ -1.03
FAM3A-221ENST00000612856 GATA4P43694 442 aa8.63□□□□□ -1.03
FAM3A-221ENST00000612856 AMTNQ6UX39 209 aa8.63□□□□□ -1.03
FAM3A-221ENST00000612856 SH2D6Q7Z4S9 175 aa8.63□□□□□ -1.03
FAM3A-221ENST00000612856 GEMIN7Q9H840 131 aaKnown RBP8.63□□□□□ -1.03
FAM3A-221ENST00000612856 IGKV3OR2-268A0A0C4DH90 116 aa8.63□□□□□ -1.03
FAM3A-221ENST00000612856 G3V4G9 280 aa8.63□□□□□ -1.03
FAM3A-221ENST00000612856 K7ERJ3 54 aa8.63□□□□□ -1.03
FAM3A-221ENST00000612856 NBEAP1P0C6P0 100 aa8.63□□□□□ -1.03
FAM3A-221ENST00000612856 ANXA2RQ3ZCQ2 193 aa8.63□□□□□ -1.03
FAM3A-221ENST00000612856 GAGE12HA6NDE8 117 aa8.63□□□□□ -1.03
FAM3A-221ENST00000612856 C9orf118A6NHY6 69 aa8.63□□□□□ -1.03
FAM3A-221ENST00000612856 CRYBA4P53673 196 aa8.63□□□□□ -1.03
FAM3A-221ENST00000612856 SPANXN1Q5VSR9 72 aa8.63□□□□□ -1.03
FAM3A-221ENST00000612856 OR10J6PQ8NGY7 276 aa8.63□□□□□ -1.03
FAM3A-221ENST00000612856 UBE2E1P51965 193 aa8.62□□□□□ -1.03
FAM3A-221ENST00000612856 CD69Q07108 199 aa8.62□□□□□ -1.03
FAM3A-221ENST00000612856 ZNF436-AS1Q8NC38 126 aaPredicted RBP8.62□□□□□ -1.03
FAM3A-221ENST00000612856 A0A1W2PPI3 338 aa8.62□□□□□ -1.03
FAM3A-221ENST00000612856 A0A1W2PPR1 153 aa8.62□□□□□ -1.03
FAM3A-221ENST00000612856 GGTLC3B5MD39 225 aa8.62□□□□□ -1.03
FAM3A-221ENST00000612856 RPL35AP18077 110 aaKnown RBP8.62□□□□□ -1.03
FAM3A-221ENST00000612856 SPATA12Q7Z6I5 190 aa8.62□□□□□ -1.03
FAM3A-221ENST00000612856 K7EP34 96 aa8.62□□□□□ -1.03
FAM3A-221ENST00000612856 RPL7P18124 248 aaKnown RBP8.62□□□□□ -1.03
FAM3A-221ENST00000612856 PEX7O00628 323 aa8.61□□□□□ -1.03
FAM3A-221ENST00000612856 RITA1Q96K30 269 aa8.61□□□□□ -1.03
FAM3A-221ENST00000612856 SS18L2Q9UHA2 77 aa8.61□□□□□ -1.03
FAM3A-221ENST00000612856 SPENQ96T58 3664 aaKnown RBP8.61□□□□□ -1.03
FAM3A-221ENST00000612856 M0R1W7 72 aa8.61□□□□□ -1.03
FAM3A-221ENST00000612856 ID1P41134 155 aa8.61□□□□□ -1.03
FAM3A-221ENST00000612856 OR5A1Q8NGJ0 315 aa8.61□□□□□ -1.03
FAM3A-221ENST00000612856 RNF125Q96EQ8 232 aa8.61□□□□□ -1.03
FAM3A-221ENST00000612856 ZNF414Q96IQ9 312 aa8.61□□□□□ -1.03
FAM3A-221ENST00000612856 JMJD8Q96S16 334 aa8.61□□□□□ -1.03
FAM3A-221ENST00000612856 C2orf70A6NJV1 201 aa8.61□□□□□ -1.03
FAM3A-221ENST00000612856 PMS2P5A8MQ11 134 aa8.61□□□□□ -1.03
FAM3A-221ENST00000612856 PAX8Q06710 450 aa8.61□□□□□ -1.03
FAM3A-221ENST00000612856 C10orf105Q8TEF2 133 aa8.61□□□□□ -1.03
FAM3A-221ENST00000612856 UBE2E2Q96LR5 201 aa8.61□□□□□ -1.03
FAM3A-221ENST00000612856 LRBAP50851 2863 aa8.6□□□□□ -1.03
FAM3A-221ENST00000612856 UBR5O95071 2799 aaPredicted RBP8.6□□□□□ -1.03
FAM3A-221ENST00000612856 PRCDQ00LT1 54 aa8.6□□□□□ -1.03
FAM3A-221ENST00000612856 TRAV8-1A0A0A6YYK1 113 aa8.6□□□□□ -1.03
FAM3A-221ENST00000612856 INAFM1C9JVW0 142 aa8.6□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 39.9 ms