RNA–Protein interactions for RNA: ENST00000612438.1

LINC00547-201, long intergenic non-protein coding RNA 547, humanhuman

TSL 2 BASIC

Gene LINC00547, Length 3,314 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00547-201ENST00000612438 C9orf153Q5TBE3 101 aa6.96□□□□□ -1.3
LINC00547-201ENST00000612438 HES3Q5TGS1 186 aa6.96□□□□□ -1.3
LINC00547-201ENST00000612438 PATE2Q6UY27 113 aa6.96□□□□□ -1.3
LINC00547-201ENST00000612438 TMEM219Q86XT9 240 aa6.96□□□□□ -1.3
LINC00547-201ENST00000612438 CHCHD5Q9BSY4 110 aa6.96□□□□□ -1.3
LINC00547-201ENST00000612438 C7orf69Q9H7B7 122 aa6.96□□□□□ -1.3
LINC00547-201ENST00000612438 LINC00574Q9H8X3 128 aa6.96□□□□□ -1.3
LINC00547-201ENST00000612438 NDUFA4L2Q9NRX3 87 aa6.96□□□□□ -1.3
LINC00547-201ENST00000612438 PROCRQ9UNN8 238 aa6.96□□□□□ -1.3
LINC00547-201ENST00000612438 NCOR2Q9Y618 2525 aa6.95□□□□□ -1.3
LINC00547-201ENST00000612438 COX7A2P2O60397 106 aa6.95□□□□□ -1.3
LINC00547-201ENST00000612438 C10orf113Q5VZT2 155 aa6.95□□□□□ -1.3
LINC00547-201ENST00000612438 SLC25A48Q6ZT89 311 aaKnown RBP6.95□□□□□ -1.3
LINC00547-201ENST00000612438 ITLN1Q8WWA0 313 aa6.95□□□□□ -1.3
LINC00547-201ENST00000612438 TMEM158Q8WZ71 300 aa6.95□□□□□ -1.3
LINC00547-201ENST00000612438 ZNF71Q9NQZ8 489 aaPredicted RBP6.95□□□□□ -1.3
LINC00547-201ENST00000612438 ANKRD11Q6UB99 2663 aaPredicted RBP6.95□□□□□ -1.3
LINC00547-201ENST00000612438 TMSB15BA0A087X1C1 80 aa6.95□□□□□ -1.3
LINC00547-201ENST00000612438 LOC107984156A0A0G2JMH3 177 aa6.95□□□□□ -1.3
LINC00547-201ENST00000612438 H3BVH4 76 aa6.95□□□□□ -1.3
LINC00547-201ENST00000612438 SPRY3O43610 288 aa6.95□□□□□ -1.3
LINC00547-201ENST00000612438 FSTL3O95633 263 aa6.95□□□□□ -1.3
LINC00547-201ENST00000612438 HERVK_113P63121 156 aa6.95□□□□□ -1.3
LINC00547-201ENST00000612438 ERHP84090 104 aaKnown RBP6.95□□□□□ -1.3
LINC00547-201ENST00000612438 ARL17AQ8IVW1 177 aa6.95□□□□□ -1.3
LINC00547-201ENST00000612438 ANKRD29Q8N6D5 301 aa6.95□□□□□ -1.3
LINC00547-201ENST00000612438 OR4C13Q8NGP0 309 aa6.95□□□□□ -1.3
LINC00547-201ENST00000612438 FXYD5Q96DB9 178 aa6.95□□□□□ -1.3
LINC00547-201ENST00000612438 PGLYRP4Q96LB8 373 aa6.95□□□□□ -1.3
LINC00547-201ENST00000612438 DUX3Q96PT4 197 aa6.95□□□□□ -1.3
LINC00547-201ENST00000612438 SLC25A15Q9Y619 301 aa6.95□□□□□ -1.3
LINC00547-201ENST00000612438 TNCP24821 2201 aa6.95□□□□□ -1.3
LINC00547-201ENST00000612438 MYCNOSP40205 109 aa6.94□□□□□ -1.3
LINC00547-201ENST00000612438 GNG5P63218 68 aa6.94□□□□□ -1.3
LINC00547-201ENST00000612438 RND1Q92730 232 aa6.94□□□□□ -1.3
LINC00547-201ENST00000612438 ZNRD1Q9P1U0 126 aa6.94□□□□□ -1.3
LINC00547-201ENST00000612438 DKK4Q9UBT3 224 aa6.94□□□□□ -1.3
LINC00547-201ENST00000612438 RPUSD1Q9UJJ7 312 aaKnown RBP6.94□□□□□ -1.3
LINC00547-201ENST00000612438 ATRXP46100 2492 aa6.94□□□□□ -1.3
LINC00547-201ENST00000612438 TRAV8-1A0A0A6YYK1 113 aa6.94□□□□□ -1.3
LINC00547-201ENST00000612438 INS-IGF2F8WCM5 200 aa6.94□□□□□ -1.3
LINC00547-201ENST00000612438 ORM1P02763 201 aa6.94□□□□□ -1.3
LINC00547-201ENST00000612438 TNFAIP6P98066 277 aaPredicted RBP6.94□□□□□ -1.3
LINC00547-201ENST00000612438 KLF17Q5JT82 389 aaPredicted RBP6.94□□□□□ -1.3
LINC00547-201ENST00000612438 IFI27L1Q96BM0 104 aa6.94□□□□□ -1.3
LINC00547-201ENST00000612438 ZNF318Q5VUA4 2279 aa6.94□□□□□ -1.3
LINC00547-201ENST00000612438 IGKV2D-26A0A0A0MRZ7 120 aa6.94□□□□□ -1.3
LINC00547-201ENST00000612438 TMEM30BQ3MIR4 351 aa6.94□□□□□ -1.3
LINC00547-201ENST00000612438 C15orf53Q8NAA6 179 aa6.94□□□□□ -1.3
LINC00547-201ENST00000612438 BAALCQ8WXS3 180 aa6.94□□□□□ -1.3
LINC00547-201ENST00000612438 GAFA1Q96PS6 74 aa6.94□□□□□ -1.3
LINC00547-201ENST00000612438 TTTY13Q9BZ97 58 aa6.94□□□□□ -1.3
LINC00547-201ENST00000612438 RNF7Q9UBF6 113 aa6.94□□□□□ -1.3
LINC00547-201ENST00000612438 DYSFO75923 2080 aa6.94□□□□□ -1.3
LINC00547-201ENST00000612438 RELNP78509 3460 aa6.94□□□□□ -1.3
LINC00547-201ENST00000612438 IGKV1D-37A0A075B6S9 117 aa6.93□□□□□ -1.3
LINC00547-201ENST00000612438 OOSP1A8MZH6 123 aa6.93□□□□□ -1.3
LINC00547-201ENST00000612438 SHISA9B4DS77 424 aa6.93□□□□□ -1.3
LINC00547-201ENST00000612438 E7EUB6 86 aa6.93□□□□□ -1.3
LINC00547-201ENST00000612438 TM4SF5O14894 197 aa6.93□□□□□ -1.3
LINC00547-201ENST00000612438 SBSPONQ8IVN8 264 aa6.93□□□□□ -1.3
LINC00547-201ENST00000612438 GATD1Q8NB37 220 aa6.93□□□□□ -1.3
LINC00547-201ENST00000612438 ZNRF2Q8NHG8 242 aa6.93□□□□□ -1.3
LINC00547-201ENST00000612438 NPIPB3Q92617 1050 aa6.93□□□□□ -1.3
LINC00547-201ENST00000612438 RPP21Q9H633 154 aaKnown RBP6.93□□□□□ -1.3
LINC00547-201ENST00000612438 EPDR1Q9UM22 224 aa6.93□□□□□ -1.3
LINC00547-201ENST00000612438 SPTAN1Q13813 2472 aaKnown RBP6.93□□□□□ -1.3
LINC00547-201ENST00000612438 HLA-DRB4P13762 266 aa6.93□□□□□ -1.3
LINC00547-201ENST00000612438 MORN3Q6PF18 240 aaPredicted RBP6.93□□□□□ -1.3
LINC00547-201ENST00000612438 ZNF833PQ6ZTB9 187 aa6.93□□□□□ -1.3
LINC00547-201ENST00000612438 DEFB108BQ8NET1 73 aa6.93□□□□□ -1.3
LINC00547-201ENST00000612438 CFHR4Q92496 578 aa6.93□□□□□ -1.3
LINC00547-201ENST00000612438 CCL13Q99616 98 aa6.93□□□□□ -1.3
LINC00547-201ENST00000612438 HLA-DRB4X5D2U9 266 aa6.93□□□□□ -1.3
LINC00547-201ENST00000612438 HEATR1Q9H583 2144 aaKnown RBP6.93□□□□□ -1.3
LINC00547-201ENST00000612438 DSCAMO60469 2012 aa6.93□□□□□ -1.3
LINC00547-201ENST00000612438 TANC2Q9HCD6 1990 aa6.93□□□□□ -1.3
LINC00547-201ENST00000612438 THAP8Q8NA92 274 aa6.93□□□□□ -1.3
LINC00547-201ENST00000612438 MLST8Q9BVC4 326 aa6.93□□□□□ -1.3
LINC00547-201ENST00000612438 MRPL20Q9BYC9 149 aaKnown RBP6.93□□□□□ -1.3
LINC00547-201ENST00000612438 PRSS22Q9GZN4 317 aa6.93□□□□□ -1.3
LINC00547-201ENST00000612438 DKK2Q9UBU2 259 aa6.93□□□□□ -1.3
LINC00547-201ENST00000612438 COL6A6A6NMZ7 2263 aa6.92□□□□□ -1.3
LINC00547-201ENST00000612438 LINC01548A6NM66 108 aa6.92□□□□□ -1.3
LINC00547-201ENST00000612438 HBDP02042 147 aa6.92□□□□□ -1.3
LINC00547-201ENST00000612438 CRYGBP07316 175 aa6.92□□□□□ -1.3
LINC00547-201ENST00000612438 SEC61GP60059 68 aa6.92□□□□□ -1.3
LINC00547-201ENST00000612438 WT1-ASQ06250 92 aa6.92□□□□□ -1.3
LINC00547-201ENST00000612438 LINC00322Q6ZN03 302 aaPredicted RBP6.92□□□□□ -1.3
LINC00547-201ENST00000612438 C3orf22Q8N5N4 141 aa6.92□□□□□ -1.3
LINC00547-201ENST00000612438 FAM216BQ8N7L0 139 aa6.92□□□□□ -1.3
LINC00547-201ENST00000612438 RAXQ9Y2V3 346 aa6.92□□□□□ -1.3
LINC00547-201ENST00000612438 DSCAML1Q8TD84 2053 aa6.92□□□□□ -1.3
LINC00547-201ENST00000612438 IGLV3-9A0A075B6K5 115 aa6.92□□□□□ -1.3
LINC00547-201ENST00000612438 MYMXA0A1B0GTQ4 84 aa6.92□□□□□ -1.3
LINC00547-201ENST00000612438 PGPA6NDG6 321 aa6.92□□□□□ -1.3
LINC00547-201ENST00000612438 CGB1A6NKQ9 187 aa6.92□□□□□ -1.3
LINC00547-201ENST00000612438 M0R1B8 84 aa6.92□□□□□ -1.3
LINC00547-201ENST00000612438 IGHV3-48P01763 117 aa6.92□□□□□ -1.3
LINC00547-201ENST00000612438 CT83Q5H943 113 aa6.92□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms