RNA–Protein interactions for RNA: ENST00000612404.4

SREK1-216, Transcript of splicing regulatory glutamic acid and lysine rich protein 1, humanhuman

TSL 1 (best) BASIC

Gene SREK1, Length 2,128 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREK1-216ENST00000612404 HIST1H1AQ02539 215 aaPredicted RBP13.09□□□□□ -0.31
SREK1-216ENST00000612404 Q86TA4 180 aa13.09□□□□□ -0.31
SREK1-216ENST00000612404 TVP23CQ96ET8 276 aa13.09□□□□□ -0.31
SREK1-216ENST00000612404 C9JCJ5 164 aa13.09□□□□□ -0.31
SREK1-216ENST00000612404 M0R036 132 aa13.09□□□□□ -0.31
SREK1-216ENST00000612404 ADIRFQ15847 76 aa13.09□□□□□ -0.31
SREK1-216ENST00000612404 TMEM78Q5T7P6 136 aa13.09□□□□□ -0.31
SREK1-216ENST00000612404 OR8A1Q8NGG7 326 aa13.09□□□□□ -0.31
SREK1-216ENST00000612404 Q8TAT8 98 aa13.09□□□□□ -0.31
SREK1-216ENST00000612404 SVBPQ8N300 66 aa13.08□□□□□ -0.32
SREK1-216ENST00000612404 OCC1Q8TAD7 63 aa13.08□□□□□ -0.32
SREK1-216ENST00000612404 MAP6D1Q9H9H5 199 aa13.08□□□□□ -0.32
SREK1-216ENST00000612404 SDF2L1Q9HCN8 221 aa13.08□□□□□ -0.32
SREK1-216ENST00000612404 LTAP01374 205 aa13.07□□□□□ -0.32
SREK1-216ENST00000612404 MGST1P10620 155 aaKnown RBP13.07□□□□□ -0.32
SREK1-216ENST00000612404 AGPAT4-IT1Q9H0P7 198 aa13.07□□□□□ -0.32
SREK1-216ENST00000612404 GDF5OSQ5U4N7 250 aa13.07□□□□□ -0.32
SREK1-216ENST00000612404 EBLN2Q6P2I7 272 aa13.07□□□□□ -0.32
SREK1-216ENST00000612404 C9orf47Q6ZRZ4 202 aa13.07□□□□□ -0.32
SREK1-216ENST00000612404 LINC01551Q86U37 167 aa13.07□□□□□ -0.32
SREK1-216ENST00000612404 FBLL1A6NHQ2 334 aaKnown RBP13.06□□□□□ -0.32
SREK1-216ENST00000612404 RPL23P62829 140 aaKnown RBP13.06□□□□□ -0.32
SREK1-216ENST00000612404 TRBV6-1A0A0K0K1D8 114 aa13.06□□□□□ -0.32
SREK1-216ENST00000612404 ZNF138P52744 262 aa13.06□□□□□ -0.32
SREK1-216ENST00000612404 RIPPLY3P57055 190 aa13.06□□□□□ -0.32
SREK1-216ENST00000612404 PNRC1Q12796 327 aaPredicted RBP13.06□□□□□ -0.32
SREK1-216ENST00000612404 ZNF124Q15973 351 aa13.06□□□□□ -0.32
SREK1-216ENST00000612404 APRG1Q8IVJ8 170 aa13.06□□□□□ -0.32
SREK1-216ENST00000612404 ZFP30Q9Y2G7 519 aa13.06□□□□□ -0.32
SREK1-216ENST00000612404 A0A0J9YX75 114 aa13.05□□□□□ -0.32
SREK1-216ENST00000612404 NPIPB6E9PJ23 425 aa13.05□□□□□ -0.32
SREK1-216ENST00000612404 SNAPINO95295 136 aa13.05□□□□□ -0.32
SREK1-216ENST00000612404 BEAN1Q3B7T3 259 aa13.05□□□□□ -0.32
SREK1-216ENST00000612404 ODF3L2Q3SX64 289 aa13.05□□□□□ -0.32
SREK1-216ENST00000612404 ACTL10Q5JWF8 245 aa13.05□□□□□ -0.32
SREK1-216ENST00000612404 FOXI2Q6ZQN5 318 aa13.05□□□□□ -0.32
SREK1-216ENST00000612404 GPR61Q9BZJ8 451 aa13.05□□□□□ -0.32
SREK1-216ENST00000612404 KNCNA6PVL3 124 aa13.04□□□□□ -0.32
SREK1-216ENST00000612404 OR11H12B2RN74 326 aa13.04□□□□□ -0.32
SREK1-216ENST00000612404 K7EN84 100 aa13.04□□□□□ -0.32
SREK1-216ENST00000612404 IGLV2-8P01709 118 aa13.04□□□□□ -0.32
SREK1-216ENST00000612404 CLRN3Q8NCR9 226 aa13.04□□□□□ -0.32
SREK1-216ENST00000612404 LINC00477Q96M19 166 aa13.04□□□□□ -0.32
SREK1-216ENST00000612404 NDFIP1Q9BT67 221 aa13.04□□□□□ -0.32
SREK1-216ENST00000612404 SAV1Q9H4B6 383 aaPredicted RBP13.04□□□□□ -0.32
SREK1-216ENST00000612404 LY96Q9Y6Y9 160 aa13.04□□□□□ -0.32
SREK1-216ENST00000612404 AGRNO00468 2067 aa13.04□□□□□ -0.32
SREK1-216ENST00000612404 IGKV3-20P01619 116 aa13.04□□□□□ -0.32
SREK1-216ENST00000612404 CD7P09564 240 aa13.04□□□□□ -0.32
SREK1-216ENST00000612404 OR5I1Q13606 314 aa13.04□□□□□ -0.32
SREK1-216ENST00000612404 PRR31Q5SQ13 230 aa13.04□□□□□ -0.32
SREK1-216ENST00000612404 TMEM183AQ8IXX5 376 aa13.04□□□□□ -0.32
SREK1-216ENST00000612404 OR4B1Q8NGF8 309 aa13.04□□□□□ -0.32
SREK1-216ENST00000612404 C8orf49Q96NF6 230 aa13.04□□□□□ -0.32
SREK1-216ENST00000612404 PRR25Q96S07 402 aa13.04□□□□□ -0.32
SREK1-216ENST00000612404 ZNF492Q9P255 531 aa13.04□□□□□ -0.32
SREK1-216ENST00000612404 SAPCD1Q5SSQ6 148 aa13.03□□□□□ -0.32
SREK1-216ENST00000612404 PRR27Q6MZM9 219 aa13.03□□□□□ -0.32
SREK1-216ENST00000612404 CT45A10P0DMU9 189 aa13.03□□□□□ -0.32
SREK1-216ENST00000612404 SMIM12Q96EX1 92 aa13.03□□□□□ -0.32
SREK1-216ENST00000612404 MLST8Q9BVC4 326 aa13.03□□□□□ -0.32
SREK1-216ENST00000612404 PPP1R14DQ9NXH3 145 aa13.03□□□□□ -0.32
SREK1-216ENST00000612404 CMC4P56277 68 aaPredicted RBP13.02□□□□□ -0.33
SREK1-216ENST00000612404 DUSP14O95147 198 aaKnown RBP13.01□□□□□ -0.33
SREK1-216ENST00000612404 OXLD1Q5BKU9 147 aa13.01□□□□□ -0.33
SREK1-216ENST00000612404 ATRAIDQ6UW56 229 aa13.01□□□□□ -0.33
SREK1-216ENST00000612404 GTSCR1Q86UQ5 136 aa13.01□□□□□ -0.33
SREK1-216ENST00000612404 ISOC2Q96AB3 205 aa13.01□□□□□ -0.33
SREK1-216ENST00000612404 ZC2HC1AQ96GY0 325 aa13.01□□□□□ -0.33
SREK1-216ENST00000612404 C7orf77A4D0Y5 90 aa13□□□□□ -0.33
SREK1-216ENST00000612404 J3KRW8 73 aa13□□□□□ -0.33
SREK1-216ENST00000612404 WIPF1O43516 503 aa13□□□□□ -0.33
SREK1-216ENST00000612404 GCGP01275 180 aa13□□□□□ -0.33
SREK1-216ENST00000612404 HLA-DRB4P13762 266 aa13□□□□□ -0.33
SREK1-216ENST00000612404 WFDC10AQ9H1F0 79 aa13□□□□□ -0.33
SREK1-216ENST00000612404 RPS10P5Q9NQ39 176 aa13□□□□□ -0.33
SREK1-216ENST00000612404 HLA-DRB4X5D2U9 266 aa13□□□□□ -0.33
SREK1-216ENST00000612404 H3BMM0 161 aa13□□□□□ -0.33
SREK1-216ENST00000612404 RHEBQ15382 184 aa13□□□□□ -0.33
SREK1-216ENST00000612404 SMUG1Q53HV7 270 aa13□□□□□ -0.33
SREK1-216ENST00000612404 LENEPQ9Y5L5 61 aa13□□□□□ -0.33
SREK1-216ENST00000612404 B4DEV8 164 aa12.99□□□□□ -0.33
SREK1-216ENST00000612404 ERVFC1-1P60608 527 aa12.99□□□□□ -0.33
SREK1-216ENST00000612404 SFRP2Q96HF1 295 aa12.99□□□□□ -0.33
SREK1-216ENST00000612404 FAM110AQ9BQ89 295 aa12.99□□□□□ -0.33
SREK1-216ENST00000612404 RNASE7Q9H1E1 156 aaKnown RBP12.99□□□□□ -0.33
SREK1-216ENST00000612404 BIN3Q9NQY0 253 aa12.99□□□□□ -0.33
SREK1-216ENST00000612404 RNF212Q495C1 297 aa12.98□□□□□ -0.33
SREK1-216ENST00000612404 STHQ8IWL8 128 aa12.98□□□□□ -0.33
SREK1-216ENST00000612404 MT-ND4LP03901 98 aa12.98□□□□□ -0.33
SREK1-216ENST00000612404 LINC00322Q6ZN03 302 aaPredicted RBP12.98□□□□□ -0.33
SREK1-216ENST00000612404 C19orf73Q9NVV2 129 aa12.98□□□□□ -0.33
SREK1-216ENST00000612404 IBA57Q5T440 356 aaKnown RBP12.97□□□□□ -0.33
SREK1-216ENST00000612404 DAZAP1Q96EP5 407 aaKnown RBP12.97□□□□□ -0.33
SREK1-216ENST00000612404 FAM19A4Q96LR4 140 aa12.97□□□□□ -0.33
SREK1-216ENST00000612404 GPX1P07203 203 aa12.97□□□□□ -0.33
SREK1-216ENST00000612404 ZNF80P51504 273 aaPredicted RBP12.97□□□□□ -0.33
SREK1-216ENST00000612404 M0R2Z0 102 aa12.96□□□□□ -0.33
SREK1-216ENST00000612404 SCO1O75880 301 aa12.96□□□□□ -0.33
SREK1-216ENST00000612404 CRIP1P50238 77 aa12.96□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 34.9 ms