RNA–Protein interactions for RNA: ENST00000612050.4

CBWD3-208, Transcript of COBW domain containing 3, humanhuman

TSL 1 (best)

Gene CBWD3, Length 1,440 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBWD3-208ENST00000612050 GFI1BQ5VTD9 330 aa8.81□□□□□ -1
CBWD3-208ENST00000612050 UBE2DNLQ8IWF7 75 aa8.81□□□□□ -1
CBWD3-208ENST00000612050 HSD17B11Q8NBQ5 300 aa8.81□□□□□ -1
CBWD3-208ENST00000612050 OR10G4Q8NGN3 311 aa8.81□□□□□ -1
CBWD3-208ENST00000612050 OR10G9Q8NGN4 311 aa8.81□□□□□ -1
CBWD3-208ENST00000612050 OR10G7Q8NGN6 311 aa8.81□□□□□ -1
CBWD3-208ENST00000612050 FAM167A-AS1Q96KT0 104 aa8.81□□□□□ -1
CBWD3-208ENST00000612050 APLNQ9ULZ1 77 aa8.81□□□□□ -1
CBWD3-208ENST00000612050 C7orf71A4D174 169 aa8.8□□□□□ -1
CBWD3-208ENST00000612050 NDUFB4O95168 129 aa8.8□□□□□ -1
CBWD3-208ENST00000612050 NMBP08949 121 aa8.8□□□□□ -1
CBWD3-208ENST00000612050 CT45A10P0DMU9 189 aa8.8□□□□□ -1
CBWD3-208ENST00000612050 PRB4P10163 310 aaPredicted RBP8.8□□□□□ -1
CBWD3-208ENST00000612050 SERF2P84101 59 aa8.8□□□□□ -1
CBWD3-208ENST00000612050 C9orf47Q6ZRZ4 202 aa8.8□□□□□ -1
CBWD3-208ENST00000612050 ZNF680Q8NEM1 530 aa8.8□□□□□ -1
CBWD3-208ENST00000612050 OR2T35Q8NGX2 323 aa8.8□□□□□ -1
CBWD3-208ENST00000612050 FXYD5Q96DB9 178 aa8.8□□□□□ -1
CBWD3-208ENST00000612050 GNPNAT1Q96EK6 184 aaPredicted RBP8.8□□□□□ -1
CBWD3-208ENST00000612050 PSMG3Q9BT73 122 aaPredicted RBP8.8□□□□□ -1
CBWD3-208ENST00000612050 STARD9Q9P2P6 4700 aa8.8□□□□□ -1
CBWD3-208ENST00000612050 RBAKDNA6NC62 111 aa8.8□□□□□ -1
CBWD3-208ENST00000612050 ATP5G1P05496 136 aa8.8□□□□□ -1
CBWD3-208ENST00000612050 ATP5G3P48201 142 aa8.8□□□□□ -1
CBWD3-208ENST00000612050 CDC34P49427 236 aaPredicted RBP8.8□□□□□ -1
CBWD3-208ENST00000612050 C15orf53Q8NAA6 179 aa8.8□□□□□ -1
CBWD3-208ENST00000612050 Q9H3A6 140 aa8.8□□□□□ -1
CBWD3-208ENST00000612050 TRBV7-9A0A0J9YWB2 115 aa8.79□□□□□ -1
CBWD3-208ENST00000612050 CBY3A6NI87 242 aa8.79□□□□□ -1
CBWD3-208ENST00000612050 K7EQM0 130 aa8.79□□□□□ -1
CBWD3-208ENST00000612050 RGS13O14921 159 aa8.79□□□□□ -1
CBWD3-208ENST00000612050 ZNF138P52744 262 aa8.79□□□□□ -1
CBWD3-208ENST00000612050 ERCC8Q13216 396 aa8.79□□□□□ -1
CBWD3-208ENST00000612050 OR2G3Q8NGZ4 309 aa8.79□□□□□ -1
CBWD3-208ENST00000612050 PHYHIPLQ96FC7 376 aa8.79□□□□□ -1
CBWD3-208ENST00000612050 HYLS1Q96M11 299 aa8.79□□□□□ -1
CBWD3-208ENST00000612050 ARPC5LQ9BPX5 153 aa8.79□□□□□ -1
CBWD3-208ENST00000612050 AGPAT4-IT1Q9H0P7 198 aa8.79□□□□□ -1
CBWD3-208ENST00000612050 WFDC1Q9HC57 220 aa8.79□□□□□ -1
CBWD3-208ENST00000612050 OTORQ9NRC9 128 aa8.79□□□□□ -1
CBWD3-208ENST00000612050 IGKV2-40A0A087WW87 121 aaPredicted RBP8.78□□□□□ -1
CBWD3-208ENST00000612050 F5H768 121 aa8.78□□□□□ -1
CBWD3-208ENST00000612050 TAAR5O14804 337 aa8.78□□□□□ -1
CBWD3-208ENST00000612050 IGKV2D-40P01614 121 aaPredicted RBP8.78□□□□□ -1
CBWD3-208ENST00000612050 AZU1P20160 251 aa8.78□□□□□ -1
CBWD3-208ENST00000612050 RNASE4P34096 147 aaKnown RBP8.78□□□□□ -1
CBWD3-208ENST00000612050 RAB2AP61019 212 aa8.78□□□□□ -1
CBWD3-208ENST00000612050 RNASE8Q8TDE3 154 aaKnown RBP8.78□□□□□ -1
CBWD3-208ENST00000612050 ACTR3CQ9C0K3 210 aaPredicted RBP8.78□□□□□ -1
CBWD3-208ENST00000612050 NOP10Q9NPE3 64 aaKnown RBP8.78□□□□□ -1
CBWD3-208ENST00000612050 ZNF492Q9P255 531 aa8.78□□□□□ -1
CBWD3-208ENST00000612050 RPH3ALQ9UNE2 315 aa8.78□□□□□ -1
CBWD3-208ENST00000612050 PGPA6NDG6 321 aa8.77□□□□□ -1.01
CBWD3-208ENST00000612050 CRISP2P16562 243 aa8.77□□□□□ -1.01
CBWD3-208ENST00000612050 ATP6V0CP27449 155 aa8.77□□□□□ -1.01
CBWD3-208ENST00000612050 IQCF2Q8IXL9 164 aa8.77□□□□□ -1.01
CBWD3-208ENST00000612050 EIF4E3Q8N5X7 224 aaKnown RBP8.77□□□□□ -1.01
CBWD3-208ENST00000612050 ARL6IP6Q8N6S5 226 aa8.77□□□□□ -1.01
CBWD3-208ENST00000612050 ATG101Q9BSB4 218 aa8.77□□□□□ -1.01
CBWD3-208ENST00000612050 NDFIP1Q9BT67 221 aa8.77□□□□□ -1.01
CBWD3-208ENST00000612050 TNFSF18Q9UNG2 199 aa8.77□□□□□ -1.01
CBWD3-208ENST00000612050 LENEPQ9Y5L5 61 aa8.77□□□□□ -1.01
CBWD3-208ENST00000612050 SERTM2A0A1B0GWG4 89 aa8.76□□□□□ -1.01
CBWD3-208ENST00000612050 KLLNB2CW77 178 aa8.76□□□□□ -1.01
CBWD3-208ENST00000612050 CXorf1O96002 111 aa8.76□□□□□ -1.01
CBWD3-208ENST00000612050 PRM2P04554 102 aa8.76□□□□□ -1.01
CBWD3-208ENST00000612050 TMEM167BQ9NRX6 74 aa8.76□□□□□ -1.01
CBWD3-208ENST00000612050 DIRC3C9JPN6 131 aa8.75□□□□□ -1.01
CBWD3-208ENST00000612050 HMGB3O15347 200 aaKnown RBP8.75□□□□□ -1.01
CBWD3-208ENST00000612050 ARPC5O15511 151 aa8.75□□□□□ -1.01
CBWD3-208ENST00000612050 ARL14EPLP0DKL9 152 aa8.75□□□□□ -1.01
CBWD3-208ENST00000612050 BTN1A1Q13410 526 aa8.75□□□□□ -1.01
CBWD3-208ENST00000612050 KIR3DS1Q14943 382 aa8.75□□□□□ -1.01
CBWD3-208ENST00000612050 AKR1C8PQ5T2L2 129 aa8.75□□□□□ -1.01
CBWD3-208ENST00000612050 TMEM88Q6PEY1 159 aa8.75□□□□□ -1.01
CBWD3-208ENST00000612050 POM121L12Q8N7R1 296 aa8.75□□□□□ -1.01
CBWD3-208ENST00000612050 VGLL1Q99990 258 aa8.75□□□□□ -1.01
CBWD3-208ENST00000612050 LINC00467Q9BRT7 94 aa8.75□□□□□ -1.01
CBWD3-208ENST00000612050 DYNC2H1Q8NCM8 4307 aaKnown RBP8.75□□□□□ -1.01
CBWD3-208ENST00000612050 TRGV2A0A075B6R0 118 aa8.74□□□□□ -1.01
CBWD3-208ENST00000612050 STAG3L2P0CL84 134 aa8.74□□□□□ -1.01
CBWD3-208ENST00000612050 STAG3L3P0CL85 134 aa8.74□□□□□ -1.01
CBWD3-208ENST00000612050 ANXA2RQ3ZCQ2 193 aa8.74□□□□□ -1.01
CBWD3-208ENST00000612050 FAM159AQ6UWV7 190 aa8.74□□□□□ -1.01
CBWD3-208ENST00000612050 TMED6Q8WW62 240 aa8.74□□□□□ -1.01
CBWD3-208ENST00000612050 RAB24Q969Q5 203 aa8.74□□□□□ -1.01
CBWD3-208ENST00000612050 ZNF503Q96F45 646 aa8.74□□□□□ -1.01
CBWD3-208ENST00000612050 FAM19A4Q96LR4 140 aa8.74□□□□□ -1.01
CBWD3-208ENST00000612050 LYSTQ99698 3801 aa8.74□□□□□ -1.01
CBWD3-208ENST00000612050 IGHV1OR15-1A0A075B7D0 117 aa8.73□□□□□ -1.01
CBWD3-208ENST00000612050 GAGE12BA1L429 117 aa8.73□□□□□ -1.01
CBWD3-208ENST00000612050 PLAC8L1A1L4L8 177 aa8.73□□□□□ -1.01
CBWD3-208ENST00000612050 RNF222A6NCQ9 220 aa8.73□□□□□ -1.01
CBWD3-208ENST00000612050 GAGE7O76087 117 aa8.73□□□□□ -1.01
CBWD3-208ENST00000612050 NUDT3O95989 172 aa8.73□□□□□ -1.01
CBWD3-208ENST00000612050 GAGE12FP0CL80 117 aa8.73□□□□□ -1.01
CBWD3-208ENST00000612050 GAGE12GP0CL81 117 aa8.73□□□□□ -1.01
CBWD3-208ENST00000612050 GAGE12IP0CL82 117 aa8.73□□□□□ -1.01
CBWD3-208ENST00000612050 CD300CQ08708 224 aa8.73□□□□□ -1.01
CBWD3-208ENST00000612050 ZNF415Q09FC8 603 aa8.73□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 52.3 ms