RNA–Protein interactions for RNA: ENST00000610733.1

TPM1-233, Transcript of tropomyosin 1, humanhuman

TSL 2 BASIC

Gene TPM1, Length 3,957 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-233ENST00000610733 PRSS46E5RG02 174 aa7.62□□□□□ -1.19
TPM1-233ENST00000610733 EIF4EBP1Q13541 118 aaPredicted RBP7.62□□□□□ -1.19
TPM1-233ENST00000610733 C5orf64Q2M2E5 130 aa7.62□□□□□ -1.19
TPM1-233ENST00000610733 TMEM78Q5T7P6 136 aa7.62□□□□□ -1.19
TPM1-233ENST00000610733 MBD3L2Q8NHZ7 208 aaPredicted RBP7.62□□□□□ -1.19
TPM1-233ENST00000610733 VWC2LB2RUY7 222 aa7.62□□□□□ -1.19
TPM1-233ENST00000610733 SH2D1AO60880 128 aa7.62□□□□□ -1.19
TPM1-233ENST00000610733 APOMO95445 188 aa7.62□□□□□ -1.19
TPM1-233ENST00000610733 DEFB1P60022 68 aa7.62□□□□□ -1.19
TPM1-233ENST00000610733 Q1RN00 199 aa7.62□□□□□ -1.19
TPM1-233ENST00000610733 IGF2BP2-AS1Q96M15 143 aa7.62□□□□□ -1.19
TPM1-233ENST00000610733 DKK2Q9UBU2 259 aa7.62□□□□□ -1.19
TPM1-233ENST00000610733 LY96Q9Y6Y9 160 aa7.62□□□□□ -1.19
TPM1-233ENST00000610733 CRYGCP07315 174 aa7.62□□□□□ -1.19
TPM1-233ENST00000610733 ZNF418Q8TF45 676 aaPredicted RBP7.62□□□□□ -1.19
TPM1-233ENST00000610733 MRPL27Q9P0M9 148 aaKnown RBP7.62□□□□□ -1.19
TPM1-233ENST00000610733 IGLC7A0M8Q6 106 aa7.61□□□□□ -1.19
TPM1-233ENST00000610733 NBR2O15453 112 aa7.61□□□□□ -1.19
TPM1-233ENST00000610733 KIR3DS1Q14943 382 aa7.61□□□□□ -1.19
TPM1-233ENST00000610733 ST20Q9HBF5 79 aa7.61□□□□□ -1.19
TPM1-233ENST00000610733 SMG1Q96Q15 3661 aaKnown RBP7.61□□□□□ -1.19
TPM1-233ENST00000610733 EPG5Q9HCE0 2579 aa7.61□□□□□ -1.19
TPM1-233ENST00000610733 IGHV3-64A0A075B6Q5 118 aa7.61□□□□□ -1.19
TPM1-233ENST00000610733 J3QR89 54 aa7.61□□□□□ -1.19
TPM1-233ENST00000610733 ZNF672Q499Z4 452 aaPredicted RBP7.61□□□□□ -1.19
TPM1-233ENST00000610733 OR2K2Q8NGT1 345 aa7.61□□□□□ -1.19
TPM1-233ENST00000610733 ARPC1AQ92747 370 aa7.61□□□□□ -1.19
TPM1-233ENST00000610733 VGLL1Q99990 258 aa7.61□□□□□ -1.19
TPM1-233ENST00000610733 COL25A1Q9BXS0 654 aaPredicted RBP7.61□□□□□ -1.19
TPM1-233ENST00000610733 GTSF1LQ9H1H1 148 aa7.61□□□□□ -1.19
TPM1-233ENST00000610733 BUB1B-PAK6H3BSN5 160 aa7.61□□□□□ -1.19
TPM1-233ENST00000610733 G3V318 75 aa7.61□□□□□ -1.19
TPM1-233ENST00000610733 SMIM17P0DL12 118 aa7.61□□□□□ -1.19
TPM1-233ENST00000610733 HIST1H1AQ02539 215 aaPredicted RBP7.61□□□□□ -1.19
TPM1-233ENST00000610733 VKORC1Q9BQB6 163 aa7.61□□□□□ -1.19
TPM1-233ENST00000610733 BEX4Q9NWD9 120 aaPredicted RBP7.61□□□□□ -1.19
TPM1-233ENST00000610733 A0A0G2JLM5 398 aa7.6□□□□□ -1.19
TPM1-233ENST00000610733 RHOGP84095 191 aa7.6□□□□□ -1.19
TPM1-233ENST00000610733 C15orf32Q32M92 178 aa7.6□□□□□ -1.19
TPM1-233ENST00000610733 BVES-AS1Q5T3Y7 98 aa7.6□□□□□ -1.19
TPM1-233ENST00000610733 AMTNQ6UX39 209 aa7.6□□□□□ -1.19
TPM1-233ENST00000610733 ZNF833PQ6ZTB9 187 aa7.6□□□□□ -1.19
TPM1-233ENST00000610733 NEGR1Q7Z3B1 354 aa7.6□□□□□ -1.19
TPM1-233ENST00000610733 C1RLQ9NZP8 487 aa7.6□□□□□ -1.19
TPM1-233ENST00000610733 HBDP02042 147 aa7.6□□□□□ -1.19
TPM1-233ENST00000610733 AZU1P20160 251 aa7.6□□□□□ -1.19
TPM1-233ENST00000610733 C3orf36Q3SXR2 165 aa7.6□□□□□ -1.19
TPM1-233ENST00000610733 ZC2HC1BQ5TFG8 222 aa7.6□□□□□ -1.19
TPM1-233ENST00000610733 MRPS16Q9Y3D3 137 aaKnown RBP7.6□□□□□ -1.19
TPM1-233ENST00000610733 LHBP01229 141 aa7.6□□□□□ -1.19
TPM1-233ENST00000610733 NPYP01303 97 aa7.6□□□□□ -1.19
TPM1-233ENST00000610733 IGLC1P0CG04 106 aa7.6□□□□□ -1.19
TPM1-233ENST00000610733 HERV-K104P63124 156 aa7.6□□□□□ -1.19
TPM1-233ENST00000610733 SP5Q6BEB4 398 aaPredicted RBP7.6□□□□□ -1.19
TPM1-233ENST00000610733 BRD3OSQ6XYD6 125 aa7.6□□□□□ -1.19
TPM1-233ENST00000610733 SIGLEC8Q9NYZ4 499 aa7.6□□□□□ -1.19
TPM1-233ENST00000610733 IGKV1D-37A0A075B6S9 117 aa7.59□□□□□ -1.19
TPM1-233ENST00000610733 TRGV9Q99603 122 aa7.59□□□□□ -1.19
TPM1-233ENST00000610733 G3V4G9 280 aa7.59□□□□□ -1.19
TPM1-233ENST00000610733 PHLDA3Q9Y5J5 127 aa7.59□□□□□ -1.19
TPM1-233ENST00000610733 C2orf70A6NJV1 201 aa7.59□□□□□ -1.2
TPM1-233ENST00000610733 ATP5L2Q7Z4Y8 100 aa7.59□□□□□ -1.2
TPM1-233ENST00000610733 TMEM158Q8WZ71 300 aa7.59□□□□□ -1.2
TPM1-233ENST00000610733 CHCHD1Q96BP2 118 aaKnown RBP7.59□□□□□ -1.2
TPM1-233ENST00000610733 IGKV1-17P01599 117 aa7.58□□□□□ -1.2
TPM1-233ENST00000610733 SMIM13P0DJ93 91 aa7.58□□□□□ -1.2
TPM1-233ENST00000610733 EFNA4P52798 201 aa7.58□□□□□ -1.2
TPM1-233ENST00000610733 ACANP16112 2415 aa7.58□□□□□ -1.2
TPM1-233ENST00000610733 TRAV40A0A0B4J280 105 aa7.58□□□□□ -1.2
TPM1-233ENST00000610733 TMEM155Q4W5P6 130 aa7.58□□□□□ -1.2
TPM1-233ENST00000610733 GEMIN7Q9H840 131 aaKnown RBP7.58□□□□□ -1.2
TPM1-233ENST00000610733 CYSLTR1Q9Y271 337 aa7.58□□□□□ -1.2
TPM1-233ENST00000610733 TRBV19A0A075B6N1 114 aa7.58□□□□□ -1.2
TPM1-233ENST00000610733 ATP5IP56385 69 aaPredicted RBP7.58□□□□□ -1.2
TPM1-233ENST00000610733 ZNF462Q96JM2 2506 aa7.58□□□□□ -1.2
TPM1-233ENST00000610733 B9A039 149 aa7.57□□□□□ -1.2
TPM1-233ENST00000610733 PSMB2P49721 201 aa7.57□□□□□ -1.2
TPM1-233ENST00000610733 MRPL51Q4U2R6 128 aaKnown RBP7.57□□□□□ -1.2
TPM1-233ENST00000610733 IL17RELQ6ZVW7 336 aa7.57□□□□□ -1.2
TPM1-233ENST00000610733 ZNF256Q9Y2P7 627 aaPredicted RBP7.57□□□□□ -1.2
TPM1-233ENST00000610733 ZNF292O60281 2723 aa7.57□□□□□ -1.2
TPM1-233ENST00000610733 CD300EQ496F6 205 aaPredicted RBP7.57□□□□□ -1.2
TPM1-233ENST00000610733 MBD6Q96DN6 1003 aa7.57□□□□□ -1.2
TPM1-233ENST00000610733 MRAP2Q96G30 205 aa7.57□□□□□ -1.2
TPM1-233ENST00000610733 PTPRBP23467 1997 aa7.57□□□□□ -1.2
TPM1-233ENST00000610733 PRSS2P07478 247 aa7.57□□□□□ -1.2
TPM1-233ENST00000610733 RNASE4P34096 147 aaKnown RBP7.57□□□□□ -1.2
TPM1-233ENST00000610733 DLX6P56179 175 aa7.57□□□□□ -1.2
TPM1-233ENST00000610733 Q6ZS92 163 aa7.57□□□□□ -1.2
TPM1-233ENST00000610733 BOD1L2Q8IYS8 172 aa7.57□□□□□ -1.2
TPM1-233ENST00000610733 LINC00477Q96M19 166 aa7.57□□□□□ -1.2
TPM1-233ENST00000610733 CUBNO60494 3623 aa7.57□□□□□ -1.2
TPM1-233ENST00000610733 A0A1B0GWB2 263 aa7.56□□□□□ -1.2
TPM1-233ENST00000610733 FABP5P3A8MUU1 101 aa7.56□□□□□ -1.2
TPM1-233ENST00000610733 GP9P14770 177 aa7.56□□□□□ -1.2
TPM1-233ENST00000610733 TMEM170BQ5T4T1 132 aa7.56□□□□□ -1.2
TPM1-233ENST00000610733 SAMD5Q5TGI4 173 aa7.56□□□□□ -1.2
TPM1-233ENST00000610733 IGF2-ASQ6U949 168 aa7.56□□□□□ -1.2
TPM1-233ENST00000610733 C14orf178Q8N769 122 aaPredicted RBP7.56□□□□□ -1.2
TPM1-233ENST00000610733 ADAMTS20P59510 1910 aa7.56□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms