RNA–Protein interactions for RNA: ENST00000608988.5

SHANK2-220, Transcript of SH3 and multiple ankyrin repeat domains 2, humanhuman

TSL 5

Gene SHANK2, Length 1,879 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK2-220ENST00000608988 ZNF672Q499Z4 452 aaPredicted RBP17.36■□□□□ 0.37
SHANK2-220ENST00000608988 FOXC2Q99958 501 aa17.36■□□□□ 0.37
SHANK2-220ENST00000608988 IGLV2-18A0A075B6J9 118 aa17.35■□□□□ 0.37
SHANK2-220ENST00000608988 LINC01619G3V211 115 aa17.35■□□□□ 0.37
SHANK2-220ENST00000608988 TMEM158Q8WZ71 300 aa17.35■□□□□ 0.37
SHANK2-220ENST00000608988 ODF3BA8MYP8 253 aa17.35■□□□□ 0.37
SHANK2-220ENST00000608988 OOSP1A8MZH6 123 aa17.35■□□□□ 0.37
SHANK2-220ENST00000608988 E9PLD3 99 aa17.35■□□□□ 0.37
SHANK2-220ENST00000608988 F8W1H4 67 aa17.35■□□□□ 0.37
SHANK2-220ENST00000608988 WFDC3Q8IUB2 231 aa17.35■□□□□ 0.37
SHANK2-220ENST00000608988 MSRB1Q9NZV6 116 aa17.35■□□□□ 0.37
SHANK2-220ENST00000608988 CHTOPQ9Y3Y2 248 aaKnown RBP17.35■□□□□ 0.37
SHANK2-220ENST00000608988 DSPP15924 2871 aaKnown RBP17.35■□□□□ 0.37
SHANK2-220ENST00000608988 ZNF207O43670 478 aaKnown RBP17.34■□□□□ 0.37
SHANK2-220ENST00000608988 CCDC144NLQ6NUI1 221 aa17.34■□□□□ 0.37
SHANK2-220ENST00000608988 IL17RELQ6ZVW7 336 aa17.34■□□□□ 0.37
SHANK2-220ENST00000608988 SLC50A1Q9BRV3 221 aa17.34■□□□□ 0.37
SHANK2-220ENST00000608988 S4R3C0 116 aa17.34■□□□□ 0.37
SHANK2-220ENST00000608988 J3QR89 54 aa17.33■□□□□ 0.37
SHANK2-220ENST00000608988 CTSGP08311 255 aa17.33■□□□□ 0.37
SHANK2-220ENST00000608988 PRB4P10163 310 aaPredicted RBP17.33■□□□□ 0.37
SHANK2-220ENST00000608988 DTX2Q86UW9 622 aa17.33■□□□□ 0.37
SHANK2-220ENST00000608988 MYOZ3Q8TDC0 251 aa17.33■□□□□ 0.37
SHANK2-220ENST00000608988 PRRC2CQ9Y520 2896 aaKnown RBP17.33■□□□□ 0.36
SHANK2-220ENST00000608988 CIDEAO60543 219 aa17.33■□□□□ 0.36
SHANK2-220ENST00000608988 ZC2HC1BQ5TFG8 222 aa17.33■□□□□ 0.36
SHANK2-220ENST00000608988 TMEM8BA6NDV4 472 aa17.32■□□□□ 0.36
SHANK2-220ENST00000608988 PLNP26678 52 aa17.32■□□□□ 0.36
SHANK2-220ENST00000608988 KLK9Q2XQG4 91 aa17.32■□□□□ 0.36
SHANK2-220ENST00000608988 TM4SF20Q53R12 229 aa17.32■□□□□ 0.36
SHANK2-220ENST00000608988 MRPL53Q96EL3 112 aaKnown RBP17.32■□□□□ 0.36
SHANK2-220ENST00000608988 KLK9Q9UKQ9 250 aa17.32■□□□□ 0.36
SHANK2-220ENST00000608988 RPL24P83731 157 aaKnown RBP17.31■□□□□ 0.36
SHANK2-220ENST00000608988 TCF15Q12870 199 aa17.31■□□□□ 0.36
SHANK2-220ENST00000608988 HES1Q14469 280 aa17.31■□□□□ 0.36
SHANK2-220ENST00000608988 LAGE3Q14657 143 aa17.31■□□□□ 0.36
SHANK2-220ENST00000608988 GTSCR1Q86UQ5 136 aa17.31■□□□□ 0.36
SHANK2-220ENST00000608988 Q8N6K4 173 aa17.31■□□□□ 0.36
SHANK2-220ENST00000608988 HIF1ANQ9NWT6 349 aa17.31■□□□□ 0.36
SHANK2-220ENST00000608988 MUC6Q6W4X9 2439 aa17.31■□□□□ 0.36
SHANK2-220ENST00000608988 A0A087WX48 190 aa17.31■□□□□ 0.36
SHANK2-220ENST00000608988 EBI3Q14213 229 aa17.31■□□□□ 0.36
SHANK2-220ENST00000608988 SAMD13Q5VXD3 122 aa17.31■□□□□ 0.36
SHANK2-220ENST00000608988 DYNAPQ8N1N2 210 aa17.31■□□□□ 0.36
SHANK2-220ENST00000608988 IGHV4-4A0A075B6R2 117 aa17.3■□□□□ 0.36
SHANK2-220ENST00000608988 IGLL5B9A064 214 aa17.3■□□□□ 0.36
SHANK2-220ENST00000608988 PRTN3P24158 256 aa17.3■□□□□ 0.36
SHANK2-220ENST00000608988 FOXI2Q6ZQN5 318 aa17.3■□□□□ 0.36
SHANK2-220ENST00000608988 ZGRF1Q86YA3 2104 aa17.3■□□□□ 0.36
SHANK2-220ENST00000608988 NHP2Q9NX24 153 aaKnown RBP17.3■□□□□ 0.36
SHANK2-220ENST00000608988 TRAV12-1A0A0B4J245 112 aa17.29■□□□□ 0.36
SHANK2-220ENST00000608988 TEX48A0A1B0GUV7 120 aa17.29■□□□□ 0.36
SHANK2-220ENST00000608988 LYNX1G3V0Z9 82 aa17.29■□□□□ 0.36
SHANK2-220ENST00000608988 LYNX1P0DP58 116 aa17.29■□□□□ 0.36
SHANK2-220ENST00000608988 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP17.29■□□□□ 0.36
SHANK2-220ENST00000608988 A0A1W2PRD5 423 aa17.28■□□□□ 0.36
SHANK2-220ENST00000608988 A0A1W2PRF3 423 aa17.28■□□□□ 0.36
SHANK2-220ENST00000608988 A0A1W2PRM7 423 aa17.28■□□□□ 0.36
SHANK2-220ENST00000608988 GAS8-AS1O95177 125 aa17.28■□□□□ 0.36
SHANK2-220ENST00000608988 NDPQ00604 133 aa17.28■□□□□ 0.36
SHANK2-220ENST00000608988 NRACQ8N912 160 aa17.28■□□□□ 0.36
SHANK2-220ENST00000608988 EP300Q09472 2414 aaPredicted RBP17.28■□□□□ 0.36
SHANK2-220ENST00000608988 HLA-DMBP28068 263 aa17.27■□□□□ 0.36
SHANK2-220ENST00000608988 C1orf122Q6ZSJ8 110 aa17.27■□□□□ 0.36
SHANK2-220ENST00000608988 MRPL35Q9NZE8 188 aaKnown RBP17.27■□□□□ 0.36
SHANK2-220ENST00000608988 K7ERJ3 54 aa17.27■□□□□ 0.35
SHANK2-220ENST00000608988 MRAP2Q96G30 205 aa17.27■□□□□ 0.35
SHANK2-220ENST00000608988 SIGMAR1Q99720 223 aa17.27■□□□□ 0.35
SHANK2-220ENST00000608988 TMEM160Q9NX00 188 aa17.27■□□□□ 0.35
SHANK2-220ENST00000608988 NCBP2LA6PVI3 153 aaKnown RBP17.26■□□□□ 0.35
SHANK2-220ENST00000608988 ERCC8Q13216 396 aa17.26■□□□□ 0.35
SHANK2-220ENST00000608988 MINOS1Q5TGZ0 78 aa17.26■□□□□ 0.35
SHANK2-220ENST00000608988 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa17.26■□□□□ 0.35
SHANK2-220ENST00000608988 TIMD4Q96H15 378 aa17.26■□□□□ 0.35
SHANK2-220ENST00000608988 ZNF479Q96JC4 524 aa17.26■□□□□ 0.35
SHANK2-220ENST00000608988 SPANXB1Q9NS25 103 aaPredicted RBP17.26■□□□□ 0.35
SHANK2-220ENST00000608988 MINOS1-NBL1R4GNA1 71 aa17.26■□□□□ 0.35
SHANK2-220ENST00000608988 ZNF292O60281 2723 aa17.25■□□□□ 0.35
SHANK2-220ENST00000608988 TRAV40A0A0B4J280 105 aa17.25■□□□□ 0.35
SHANK2-220ENST00000608988 IGKV3D-20A0A0C4DH25 116 aa17.25■□□□□ 0.35
SHANK2-220ENST00000608988 A0A1B0GWB2 263 aa17.25■□□□□ 0.35
SHANK2-220ENST00000608988 C12orf74Q32Q52 190 aa17.25■□□□□ 0.35
SHANK2-220ENST00000608988 CD300EQ496F6 205 aaPredicted RBP17.25■□□□□ 0.35
SHANK2-220ENST00000608988 ZNF502Q8TBZ5 544 aa17.25■□□□□ 0.35
SHANK2-220ENST00000608988 TTTY13Q9BZ97 58 aa17.25■□□□□ 0.35
SHANK2-220ENST00000608988 K7EMI3 77 aa17.24■□□□□ 0.35
SHANK2-220ENST00000608988 BUB3O43684 328 aa17.24■□□□□ 0.35
SHANK2-220ENST00000608988 GATA1P15976 413 aaPredicted RBP17.24■□□□□ 0.35
SHANK2-220ENST00000608988 FAM110DQ8TAY7 271 aaPredicted RBP17.24■□□□□ 0.35
SHANK2-220ENST00000608988 ZFAND3Q9H8U3 227 aa17.24■□□□□ 0.35
SHANK2-220ENST00000608988 SH3BGRL2Q9UJC5 107 aa17.24■□□□□ 0.35
SHANK2-220ENST00000608988 GOSR1O95249 250 aa17.24■□□□□ 0.35
SHANK2-220ENST00000608988 SLC25A16P16260 332 aa17.24■□□□□ 0.35
SHANK2-220ENST00000608988 IGFL4Q6B9Z1 124 aa17.24■□□□□ 0.35
SHANK2-220ENST00000608988 PRAC2D3DTV9 90 aa17.23■□□□□ 0.35
SHANK2-220ENST00000608988 H7C1H1 209 aa17.23■□□□□ 0.35
SHANK2-220ENST00000608988 IGHV3-23P01764 117 aa17.23■□□□□ 0.35
SHANK2-220ENST00000608988 SELENOKQ9Y6D0 94 aa17.23■□□□□ 0.35
SHANK2-220ENST00000608988 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP17.22■□□□□ 0.35
SHANK2-220ENST00000608988 TMEM78Q5T7P6 136 aa17.22■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 42.7 ms